TCONS_00052768 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052768
Unique NameTCONS_00052768
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2460

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052768 ID=TCONS_00052768|Name=TCONS_00052768|organism=Clytia hemisphaerica|type=transcript|length=2460bp
TGAATCCAATGGgcacaaacgtcttttggacgtctagTATACGTTTCTAG
AACGTCCAAAGGTCTTAAAGCCGTCCATTGAATGTCAATAAGACGTTGCG
TGCCCATAAGGTTATTTCTACATTGTGATGATTAAATTGGTTATGGCATA
AGTTGGCTCCACTCTTTCTTAACAAAACACACAATTTCTCATACATGAAC
ATTTTCTTTTAGCATCGAGGAGTCGATCCATGTCCCCTGAAGACAAACAA
ATCATATACGTCGTGTCTGGAACCTTATCGTTAGTCCTGGTCATCATTAT
TGCCGTGGTACTATCAAGCATCTATTATCGACGTCGTCAAGCATTACTTA
ATACTGAAACGGCTGAAGCGTCATCGACGGGACACGACGAAAACAAATCA
AGGAAGATCTCATTACATCAGGTCAATCACCAACGTAAAATCTCAAGACA
AGAGAATACTTTCCACATGCCAGACCCTCGTTTCGAGCCAGTTTTACATC
GAACGACAACCAATGGAATGATTGAGAACAATATGTTGAAAAACAATTTG
TGCAAAAAAGCATCACCATCTATAAACAGcacaaaataaagaaaaacaat
aatgAAAGATTTAACAAACGACATAATAAAAGAACAACAAAAGATTGTTC
TTATCACTGGCTGTTCATCAAATATTGGTTTACAACTCGCCAAGCAACTC
GCCGAGAATAGTACTGATGGTAACAAAGACTACCTTGTGTACGCTACTGG
ATGTATGTTAAATGACGAGTTAAAAAATGTGGCGAGTGATGTTTGCCGTG
TAAAGAAAATGAATTTGACGAATTCTGATGAATGTAGAGAGGTTATTGAT
GGCATACTTAGTGAACATGGAAACATTGATATTTTAGTTCATTGTACCAG
TGTGAATCATTATGAAGCTATCGAGAAGATCACAACTGAGAAAGCCAGAG
CTGTTATGGACATCAATGTCACTGGTATTATCAATGTTACATCGATGTGT
TTACCGAGAATGAAAGAAAATGCCTCTGgacATATCGTTGTTGTTTCTTC
ATTCTCTGGCATCATCGGTGTTCCCTTCAACAGTATTCATTCCGCCTCCA
AGTTCGCCATTGAAGGATACTGTGAATCACTCAGAGATGAAGTCGCCAGA
CATAATATAAGAGTGAATATCGTTGAAGTGGGCCCAGTGACGTCATCAGA
GGTTGATAAAGAATTACTAGAACAGCTTTCCtcaaataacgaagatgaaa
ataaattgaTGGAAATTTTCAAACAAAAGATGGATGCCTCAAACCAAACA
ATGGGTCAATCACCAGATCTCATTGCCAAACAGATAAAGACCATCATTGA
ATCGCCCAATAATGGTCAGTTTCGATATgaaacaaatcaaatttatgcaA
ATGCGttatcaaaagttttcaaagaaaaaacgAACATTCAGCAAGCAAGA
ATGTTTTCACTTTCCGGTGGAACTCTGTGAACGGAAAGTGGAACATCGAA
ACGGAAAATGGAGCTCGCAACGTTGAAACGGACAAAATGTACAGTTATTC
TTTGAGCCCTTATACAGCTCGCTTACCTTCAAAGAGTACACTGTAAGAAA
ATTGTTGAAGAAGAATGCAGGACTGTTTTTAAtgctttttcttcattttt
ctctgtccaaatattacaaaatctttgaatgaaaacaaaatatttcgaTA
AGCGTACTGTTATTTTCCGTCTTAAAAGGAGTCTGTATATATCTTTGTAA
TTTATAAATTTATTACATCCCTGTGTCGATAACCCGGTGAAAGCTTTTTA
TGATATCATAACTAGAAAAAGGTCTAGTTAGAGGGGCCGCTGGCTACGCC
TGAACAGTATTCTTCACTGTTCAGTTCGTGGCAAAACATTTAATTGAAGA
AAAACTCTCGGCCAAAAATTTGTATACTTGCTGTTCAGCTCGTGGCCCAG
ACCCCACCCCAAAGAGCTGTTCGTCTCGTCACCCAGACCCCACCCAATAG
ctgttcagttcgtagccagcgACCCCTCTAACCAGACCTGATCCCATAAC
TATATAATGTTATACGGATGGGGAAAATCTCATGCTTTCGGGATTAAGAA
TTATTGTTTGCAGCTCAGAATATAAAATGCTgatagcaaaatatttccat
tgctttttccaatttctAGGTGATTTCTTGTACCGGGAACAATTTTCTGC
TGATTTTTCAATCGATTAAGGTACACTTCCTGGTCTAAAATTATTTAGta
taaaatttaacttttatagttttattttaaaatgtgaaatttatatttgt
attttcaatttattttataATTCTAAAAGCTTTTCACTTTAAAAGAGACA
CATGGCCTAGCTTCACATTATAAAGTGCTTTCCCTATGGAGATACTGAGA
GTACCATGTTAGGAGGATTAAACGGCTACGTGGATGCTGGCTAGATTCAA
TTATGCTATG
Run BLAST on NCBI

transcript from alignment at scaffold_22:88113..97574-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052768 ID=TCONS_00052768|Name=TCONS_00052768|organism=Clytia hemisphaerica|type=transcript|length=9462bp|location=Sequence derived from alignment at scaffold_22:88113..97574- (Clytia hemisphaerica)
TGAATCCAATGGGCACAAACGTCTTTTGGACGTCTAGTATACGTTTCTAG
AACGTCCAAAGGTCTTAAAGCCGTCCATTGAATGTCAATAAGACGTTGCG
TGCCCATAAGGTTATTTCTACATTGTGATGATTAAATTGGTTATGGCATA
AGTTGGCTCCACTCTTTCTTAACAAAACACACAATTTCTCATACATGAAC
ATTTTCTTTTAGCATCGAGGAGTCGATCCATGTCCCCTGAAGGTAATACT
GTTTTTAAATTATTTGAATTCTATTCTAAATTATTGTCCTAAGATAGTGG
GCTTGTTTCCTGTCATACTTAATATTAAGAAAATAGTCATAATACCAGTG
ACATACTACGTACAGTATTTTACCAGCTGGTGTTTGACATCAAAAGTAGG
TCCATCTAACGTCTATAACGTCTAGAGAATGTTATGTACGTTAATGGGCA
ATAGCAGTGCGCGGAGAATTAATAGAATAGGATAGTGTACTTCAAAATAA
AAAATAAATGAAAGCCAAAACCTGGGGGGGGGTACTTAGGCAAGTGAAAA
GTACGGGTATGAGTCACCCTTAGGGGTGCCTTTTTGGGACCTAAAAGTCC
CTGTAAGGGTTGGAGAAACCAGAAAATTAAATTTCAGTCCCACTAAGGTT
CGGAAAAATAGGAAATTTCTACTTTTTGCTACTTGAAAGTTCAAAATTTG
GTCAAATTAGTCTCTACCCCCGGCCACGACTGACCTTACCTAATCCTGCC
CCCTCTCTTACAATGTGCAACCAACATGGGATAAATGAAAATAAACTGAA
AATTCTATTTTACAGACAAACAAATCATATACGTCGTGTCTGGAACCTTA
TCGTTAGTCCTGGTCATCATTATTGCCGTGGTACTATCAAGCATCTATTA
TCGACGTCGTCAAGCATTACTTAATACTGAAACGGCTGAAGCGTCATCGA
CGGGACACGACGAAAACAAATCAAGGAAGATCTCATTACATCAGGTCAAT
CACCAACGTAAAATCTCAAGACAAGAGAGTAAGTTCTCGTTTTTTTGAAT
AATGGGCTTTTCCAGAAATAGTCCGTGCATCCCCTGTTGAGGTTATCGGG
TTAAATATCTACATATCTACAATGGAGCAGATATCCAGGGGTAAAGTGTC
TTTTCAACTAAAAAATACAATATCCAGGGGTCTTTACTAATAAAGTAGGC
TATCTAGGGGGTTTGATACTTCGAAAAATCAATATTCTCAACAGTGGGGG
TAAAAGTTTTTTCTGGAAAAGCCATCGCGGAGAATGCGGTTTGAATTTCT
GTTCGAAATTCGAAAGACGGAGTTGATTTCCCTTTTTTTGTTGAGTTTTC
TTGGCTTTATCCATTAAAGGAGTCTACACAATATAGACACTTCAAGATTT
AGTCTTACTAGCATATTTTAGCCATATTTTTCAGTATATGTCTGTTCTCT
TTAGATACTTTCCACATGCCAGACCCTCGTTTCGAGCCAGTTTTACATCG
AACGACAACCAATGGAATGATTGAGAACAATATGTTGAAAAACAATTTGT
GCAAAAAAGCATCACCATCTATAAACAGGTTTGAGAATAAAACTTTTATT
GATGATGAAGAATTTTAAAAATAGTGATTTGTGAATAGACGTTTTAAGAA
CATTAAAAAATTTTAAGGCCTTCAGACGTTCTTAACTTTTTGAGATTATG
TTCTTATTTTCATTATCTTGTGAATATTTCTGTACACATCTTAAGAAATC
GGTTATGGTTTAATTAAAGTCCTTGTTTTTAGACCATCGAAGCCTTACCC
AGCTGACACACAACGTTCTTTCGACGTTTATATGATGTTCCCAACGTCCA
TATAATGTTAGATGAACGTTGAAGCAACGTTGTGTGCCAGCTGATTACGC
CCAATTACAACTGTCCTACACCCTTAATCCCAGGCTTAACCTAACATCAT
CTAGCAGAGAAGTTGACCGCTTTATTTCTTTCCAGTATAATTCACCACCC
TATGAAATTTATACTCACAAAATTAGAAAAGTTGCTATTGGATAACCAGG
AAACTGGATGTGTAAAACTCTTCTCTCAATATAGCTAGTAATCTTACCAT
CTTTATTCTGGTCCATTTTGAGCATGAAAAACATGTCATCCACTTGCTCC
AAATTCATCTTCAAATCGGCTAATTGTGGAACCAGAAGCACCTGTGGAAA
AGTTTGTTTTGTATAGCCGTTAAAACAAAGTTTTTTCTTTCCAGCTGGGC
TTTTCCAGGAAAAAACCGTGCACCCCCTGTTGAGGAGGTTCAACCTTTTG
TGACCTACCCCCTTGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGGGGGATTTTCAAGCTTCAATCTTCAAG
ACCTTCAACCTTCAATCTTTTCTTATAGGGCTCAGTGCCTAACTCTAATT
TACCTAGCTATTTCTTTAAAGTTGAACATACTTTTGGCAAAAATAGAGTA
GAATTTTCTCATAAGTACCGTGTATATGATTTTTCTCGACCTTTAGAATA
TAGGATAGGTTGAAAGGTTTTTTAGCTGCCTTTTATCATATAATTATAAA
ACTCAGTTTAAAGCAATTTTAAAGATTTTATGAATTTGAAAAGTAAATCT
TTTTTTAAAGAATCATGTATGTAAATTTTTTATCCTACTTATTTTTCTAT
AAATTCGTGATCCTTTTGTGTAAATATTATTCCATATATTTTGATATTAA
AAGGTTGTATTTAATACCCTTTCTTATTCGCTATTTGGTCCCTTATGCCA
ATCCAATTTGGATTAAGTGGTTGGTACGTTGCCCGGGGGGGGGGGGACTT
AGGCAAAATGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGTGAAAATCAAACCAAGATTTGGAA
AAAATGGACCAAAATTTAGGAAAAAGTCTCTCAAAGGGTCCCAAAATCAC
CAAAATTTTGTCTCTCAAAGGGTTGACTTTCGATTTTCGGCTCGGATATA
CCCGTCACCTCGCAAACCTAGTACCCCCCCGGGGTACGTTGGTTTAGTTG
TATAAATTTCCCCATATTTTTTCACAAATTGTAGTCATATACTATAATTA
TCCCGTAATATTACTGTACCGCCCGGGAGGGGAGGGGTAAATGAAGGGTA
CTAGTACAGGTATGTTCCGCCCTTAAGGGTGTCTTTTTGGACCTTCTAAG
TCCCTCTAAGGGTCGTAAAAATCACAATATTTAATTTCAGTCCACCTGAG
GGTTACAAAAAATCCCATAAGGTTAAGTTTTAGTAAAAAGTCTGGGTAAG
AGTCCAAAAATTCCTTAAATTTCCAACTTTCAAAAATCGGGTGGTACCCC
CACCACCATTTTACAAATCTGGAACCCCAGGACATTTTTCTCACATTGTT
TGTTTGCTTTCGTCTTTTTCGTTTCAGCACAAAATAAAGAAAAACAATAA
TGAAAGATTTAACAAACGACATAATAAAAGAACAACAAAAGATTGTTCTT
ATCACTGGCTGTTCATCAAATATTGGTTTACAACTCGCCAAGCAACTCGC
CGAGAATAGTACTGATGGTAACAAAGACTACCTTGTGTACGCTACTGGAT
GTATGTTAAATGACGAGTTAAAAAATGTGGCGAGTGATGTTTGCCGTGTA
AAGAAAATGAATTTGACGAATTCTGATGAATGTAGAGAGGTTATTGATGG
CATACTTAGTGAACATGGAAACATTGATATTTTAGGTTTGTATTTTGAAT
TTTATTCTTGCTTATGTGTATAGTCTGTATAAAAGTCCCTGGTCTCCTGG
TAGTCTATTTAGTGTTTTTGACTTTTTCAACAAATACTACTTCGCTTCTG
AGATTGGTTCAATATTCATTGCAATGTTAAAAATGAACGTCTAACGGTGT
TACATGATCAAAAGTATTCGAAAAGAGTAAATATATCACACTCTATGCAT
TTACACCGCTATTGAGTAGTGCTACCATTAGGATACACCGCTATTGAGTA
GTGCTACCATTAGGATACCACTTCAAGACGATTTTTGGTTGACCGTGATT
GGTTAACTTAGGCTACTTTACATACACGCTTTTTTTAATAAGAATACACT
TTATGATAAGAATGACCAAAAAATTACGAATAATGCTAAGAATATCACCG
TCATGGAATTTTTCTACTCAAGCTAAGGATGTATATATAAATTTGGATGT
ATATATAAATCGTCAATTACCCCCAAGTAAGGCTCCCTCCTTTCAAAAAA
ATGTCATCTTATGCTTGAGACGTATGTACTAAATGTTTAATCTAGTCTGA
ATTAGGATCCTAACCTAAGAATGCTGTAGGAATATTTTCGGATGATTTTC
CCAAAAAAGTTAAGAATATGAATGATAAAATGAATTTACACCATTCTTAT
AAAAAAAAGCGTGTACCAACTGTACCCACGGCAGTGGTATTCGCCGTAAA
AAACACTCTACTTAACCTCACAATTATTCTCACATCAGTTCATTGTACCA
GTGTGAATCATTATGAAGCTATCGAGAAGATCACAACTGAGAAAGCCAGA
GCTGTTATGGACATCAATGTCACTGGTATTATCAATGTTACATCGATGTG
TTTACCGAGAATGAAAGAAAATGCCTCTGGTGAGGATATTTGTTTTCTTA
CCTCATGGGAATAAATATTTATACAGGTGGAGCCTCTGTCGAACATCCTT
GTCTCACAGCTCCGGTGGCAGTTTTCAATCAGTGACGATGAACATTTTTA
TCGAAGTCCCAATGGGTTATAGAAATTCTATTGTTCCCTGCTTAAAAATT
GCAGTGGAAATGGTTTTGGAGTGCAATTTTTCCATTGAACTACAATAAGT
GGGGATGAAATCAAAGTCAATTTCCCAGTGGGCAGAAATTGTAGGGTATT
TTCCACTGGTGACGAAATTCGGGGCAAATATTCCAGTTTGGCTGGGTTCC
CAGCGGGTCTGTGACACAGGTATGCCAAGGTATGTCTTTTTTAACCCGAA
AAGTGGATATCAAGATCAAAAGCCAAAAGGTTTTTTGGCATTTTGATTCA
CAATTCATAAGCAACTTTTTGACTGAAATCCAGAAAATCCTAGCAAATTG
GGGCTGCTTATAAAAGAAAATGTGTAAATGGTTTTCATTTTTTAGGACAT
ATCGTTGTTGTTTCTTCATTCTCTGGCATCATCGGTGTTCCCTTCAACAG
TATTCATTCCGCCTCCAAGTTCGCCATTGAAGGATACTGTGAATCACTCA
GAGATGAAGTCGCCAGACATAATATAAGGTGGGTGCATGAGTTTTTTTAC
TTTTGATATAATATAATACACTCCTGAAAATCACAGTTTTTCGGACGAGG
TTAGCCTCAGCTATGGTTCTTTTAAGGCTTTATGGACTCTAAAACACCCA
ATTCTTTGAGATTGCACAAAATGTCTCACAAAATTAAGAACAATTACAAA
GTTAAGAACATCCTAAGGCTTCAAAACATTTTCTCTTGTAACTTTTAGTT
TTTTTGTTCGAAGTCTACACCCTAATATGCTTCGTTTGACATATAAATGA
CCATGCCTAAGGCCCCCAATTTTATACGCCAAACTTATGTCATTTTTGGA
CATGCCATAAGTTACACGAGTTAGATGTTCTGAGATGTTTTTATAAAAAA
CGTGTTGTCAGGATTATTTTGTTGTCCACCTTATAGAGTGAATATCGTTG
AAGTGGGCCCAGTGACGTCATCAGAGGTTGATAAAGAATTACTAGAACAG
CTTTCCTCAAATAACGAAGATGAAAATAAATTGATGGAAATTTTCGTAAG
TAAATTAGATTAAATTTAATAATTTATTAAAGTTATTATACAAAATTTAG
AAATCTCATTAAGAGGGCTTAAATAAAAAGTGACAGATAAAAAATTTTGG
GTTATATCAACCTCGTCCCCGTGTATCCCAGGCTTTATTTACGTTACTGA
TTGACGCCATATGATATAAGAGTATTATCTAGCGCTATCAGTAAGCATAA
AAAAGCTGATAAAACACAGGGAACAAGGTTGGAGTTATATATGTTTTTCT
TGAAAGGCCAAATAAGGAAAAGGTATCAAATACTCTAAGTAGGAGACTGA
GCTATAATAATTGGACTATACTTTATTCATTGTGCTTAAGCAAGTCTCTA
AAATATTATCTTCGCCTAAATTGATAATATTTTCAGTAGAACCACCTAAA
TCGTTAATCGAGTCAATAGCGAATAACACATAACGTACACCACTTATCAA
TCTTGAAACGGCATGCATTTCTTTGGTATGGGCAGATAGCGTACCCGCTG
GACGGTTCGGAATCATTAACCCTTGATCATCAGTATAAAAACAGAACTTT
CCACCAACGTATTCCGTATCATTATTAAGCGTGTATTGAACAGTTGGTGT
TGAGTATGGACCATCTACGTGCCACGGTAAACAACCTTGAGTGGGTGATG
TTCGTCTCAAAACCAGTTGATAATTTGAATCACTTTTTGAATGATTTTTC
GTTAGTACACTTTCAGCTGCAGCGGATCCTATGATTTTGACAAGAGATCC
AATGGGTAGTAGAATTTTAACGTCTTGGAGGATTTTCTTTGATTTGTTTT
CTTTTTGTTGTTGTAAAGAATACACATGATTTGCAAGTGCAATCAATTTC
TGTCTTTGTTGCTGATCCAAAATATCATCTCCAGTTTGATCAAACGTCAA
AGCAGACACGTTAGATCTGCCATATTCCATGCGTTTCTGTTTTAAAATTT
TCTCAGATATCCGAAGAGAACCAGATAGATCACCTTTCATCAGAAAATCA
TTTAGAGGGTCGGAGACATCATTCTCTGAAAAATTTGAAATGTTACGTAA
TCGTAGAACTAAGTGTAAAGTCGATTCTGAAGTGATATCATAAAATTCCA
ATGTTTTTTCATCTTCTAACTGTTTGCCTTGATATATCAGACGTTGTTGA
TCTGGTGGTATACCCTCTTTATCTTGAACCAGGACTTTGACTCGATCAAT
CGTATCACGTGGGCTGACTTCCAAAACAATTGTTTTGTTGTTCAATGTTT
TGATAAAAATATTCATACTTTTTTAAGCTAGATATATTCAAGAATTAGCC
ATGATATATTGAATTTTAGAAAAAATATATTTTTGGGAATTCTTTATTCT
ATTATGAGTATAGAATAAAAGTCAAAATACCGAAAGCCGACTTGAGTCTT
CTTGACTACATAACTGTTCACTGCAGATTTTTCTGAAAAAGTTGAGAAAA
CGTTCGTAAAGTTGGCCCATAAGTAGAAATTCTCTCTAGCTTTCTCCTGA
CTGAGATCTCTCATACCATTCACAAACTAACATAGATTTTGTGTTGATGT
TTATTAATCATCAGTATGGAAGGAAAGTCTGTTGCAATGGCATCAATAGC
TCAAAAGATATTAAAAAGTTTTTTTATATAAATAATAATCTCTATTTAAT
ACCATCTTTAAAACTTTTTAAACCTTTATATAAGCATTCCAATTTTTCCT
TGACAATACACCTTTTCGACCGTAGTCGCGCAGTCAGGTGCGTGCCACTT
TATTATTTAATTTACCACCCTAAAATCGATCTAATCCTATTTTTACACTT
TTTTCTTTTAGTGCGAAGAAAAGACTGGGACGGTTTTAGGGTGGTAAAAC
GGACAAAAAATTGCCCGCACGGCAATTGGCGGCTACGGTCGAAAAGGTGT
ATTCTGCAGTTTTAACGTTATTCTTTTCTATGATATAGAAAGGAGGCGCA
CCTCTATGCTGACAAAGCAGAAAAAACAAATTAATATGCTGTGTAAACGA
ACGGTAGGAAATATGTTAAATGATTTTCTTTAAGGTAGCTACTAAGGTAA
CTTTTCCCTTTTTTTAATACAGAAACAAAAGATGGATGCCTCAAACCAAA
CAATGGGTCAATCACCAGATCTCATTGCCAAACAGATAAAGACCATCATT
GAATCGCCCAATAATGGTCAGTTTCGATATGAAACAAATCAAATTTATGC
AAATGCGTTATCAAAAGTTTTCAAAGAAAAAACGAACATTCAGCAAGCAA
GAATGTTTTCACTTTCCGGTGGAACTCTGTGAACGGAAAGTGGAACATCG
AAACGGAAAATGGAGCTCGCAACGTTGAAACGGACAAAATGTACAGTTAT
TCTTTGAGCCCTTATACAGCTCGCTTACCTTCAAAGAGTACACTGTAAGA
AAATTGTTGAAGAAGAATGCAGGACTGTTTTTAATGCTTTTTCTTCATTT
TTCTCTGTCCAAATATTACAAAATCTTTGAATGAAAACAAAATATTTCGA
TAAGCGTACTGTTATTTTCCGTCTTAAAAGGAGTCTGTATATATCTTTGT
AATTTATAAATTTATTACATCCCTGTGTCGATAACCCGGTGAAAGCTTTT
TATGATATCATAACTAGAAAAAGGTCTAGTTAGAGGGGCCGCTGGCTACG
CCTGAACAGTATTCTTCACTGTTCAGTTCGTGGCAAAACATTTAATTGAA
GAAAAACTCTCGGCCAAAAATTTGTATACTTGCTGTTCAGCTCGTGGCCC
AGACCCCACCCCAAAGAGCTGTTCGTCTCGTCACCCAGACCCCACCCAAT
AGCTGTTCAGTTCGTAGCCAGCGACCCCTCTAACCAGACCTGATCCCATA
ACTATATAATGTTATACGGATGGGGAAAATCTCATGCTTTCGGGATTAAG
AATTATTGTTTGCAGCTCAGAATATAAAATGCTGATAGCAAAATATTTCC
ATTGCTTTTTCCAATTTCTAGGTGATTTCTTGTACCGGGAACAATTTTCT
GCTGATTTTTCAATCGATTAAGGTACACTTCCTGGTCTAAAATTATTTAG
TATAAAATTTAACTTTTATAGTTTTATTTTAAAATGTGAAATTTATATTT
GTATTTTCAATTTATTTTATAATTCTAAAAGCTTTTCACTTTAAAAGAGA
CACATGGCCTAGCTTCACATTATAAAGTGCTTTCCCTATGGAGATACTGA
GAGTACCATGTTAGGAGGATTAAACGGCTACGTGGATGCTGGCTAGATTC
AATTATGCTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033359XLOC_033359Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052768-exon-scaffold_22-1575043694:97333..97574TCONS_00052768-exon-scaffold_22-1575043694:97333..97574Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:96547..96759TCONS_00052768-exon-scaffold_22-1575043694:96547..96759Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:95997..96120TCONS_00052768-exon-scaffold_22-1575043694:95997..96120Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:93440..93747TCONS_00052768-exon-scaffold_22-1575043694:93440..93747Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:92546..92686TCONS_00052768-exon-scaffold_22-1575043694:92546..92686Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:91897..92029TCONS_00052768-exon-scaffold_22-1575043694:91897..92029Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:91380..91488TCONS_00052768-exon-scaffold_22-1575043694:91380..91488Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1575043694:88113..89302TCONS_00052768-exon-scaffold_22-1575043694:88113..89302Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:97333..97574TCONS_00052768-exon-scaffold_22-1510915933:97333..97574Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:96547..96759TCONS_00052768-exon-scaffold_22-1510915933:96547..96759Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:95997..96120TCONS_00052768-exon-scaffold_22-1510915933:95997..96120Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:93440..93747TCONS_00052768-exon-scaffold_22-1510915933:93440..93747Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:92546..92686TCONS_00052768-exon-scaffold_22-1510915933:92546..92686Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:91897..92029TCONS_00052768-exon-scaffold_22-1510915933:91897..92029Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:91380..91488TCONS_00052768-exon-scaffold_22-1510915933:91380..91488Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1510915933:88113..89302TCONS_00052768-exon-scaffold_22-1510915933:88113..89302Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:97333..97574TCONS_00052768-exon-scaffold_22-1491911889:97333..97574Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:96547..96759TCONS_00052768-exon-scaffold_22-1491911889:96547..96759Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:95997..96120TCONS_00052768-exon-scaffold_22-1491911889:95997..96120Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:93440..93747TCONS_00052768-exon-scaffold_22-1491911889:93440..93747Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:92546..92686TCONS_00052768-exon-scaffold_22-1491911889:92546..92686Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:91897..92029TCONS_00052768-exon-scaffold_22-1491911889:91897..92029Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:91380..91488TCONS_00052768-exon-scaffold_22-1491911889:91380..91488Clytia hemisphaericaexon
TCONS_00052768-exon-scaffold_22-1491911889:88113..89302TCONS_00052768-exon-scaffold_22-1491911889:88113..89302Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:88113..97574 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.27358	1.27484	0.641931	1.91972e-05	3.74446e-08	1.47857	1.64034	2.67512	0.117228	0	0.304659	0.0282538	2.26923	2.97104	0.28276	0.00435035	1.34134	1.0394	1.14286	3.09298	4.08716	6.5235	1.24606	2.5656	2.65131	3.61878	1.02175	0.406048	0.81405	0.627275
Blast
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BLAST of TCONS_00052768 vs. Swiss-Prot (Human)
Match: DHB1 (Estradiol 17-beta-dehydrogenase 1 OS=Homo sapiens GN=HSD17B1 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.026e-22
Identity = 79/271 (29.15%), Postives = 133/271 (49.08%), Query Frame = 2 
Query:  638 QKIVLITGCSSNIGLQLAKQLAENSTDGNKDYLVYAT------GCMLNDELKNVASDVCRVKKMNLTNSDE-----CREVIDGILSEHGNIDILVHCTSVNHYEAIEKITTEKARAVMDINVTGIINVTSMCLPRMKENAXXXXXXXXXXXXXXXXPFNSIHSASKFAIEGYCESLRDEVARHNIRVNIVEVGPVTSSEVDKELLEQLSSNNEDENKLMEIFKQKMDASNQTM---GQSPDLIAKQIKTIIESPNNGQFRYETNQIYANAL 1408
            + +VLITGCSS IGL LA +LA   +D ++ + VYAT         L +  + +A     ++ + L   D       RE +       G +D+LV    +     +E +  +   +V+D+NV G + +    LP MK   SG ++V  S  G++G+PFN ++ ASKFA+EG CESL   +    + ++++E GPV ++ ++K L       +  +      F Q +  S Q      Q+P+ +A+   T + +P     RY T + +   L
Sbjct:    3 RTVVLITGCSSGIGLHLAVRLA---SDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-----TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKP-TLRYFTTERFLPLL 264
The following BLAST results are available for this feature:
BLAST of TCONS_00052768 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHB16.026e-2229.15Estradiol 17-beta-dehydrogenase 1 OS=Homo sapiens ... [more]
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