TCONS_00052972 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052972
Unique NameTCONS_00052972
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length800

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052972 ID=TCONS_00052972|Name=TCONS_00052972|organism=Clytia hemisphaerica|type=transcript|length=800bp
cttccgcgaaatatttctaaacaaaactcaaaatatgtcagataaatact
atttgaatggttacttgcatcaaaggagcgctaataatgtgtatttcaac
aaccacgATTCATGATTTGGCAGTAAAAgccacaaaatcgtgaaaatatt
gccacccgcgaaatttttgaatttcgcggaaaggcccaaccgcgaaattt
aatccctgcaaaagtttatcccattaaagtattaattcattatttgaAAA
TGCAGGAAAAAGGCTGTAAAATTGGAAAAGGTAGTCAAATCCCAGTAAAA
ATTACGATAAATGATACAAAAGATGTGAAAGTGAAAAACTCTTTCCTCTA
TTTCTTCTAGAGTAGAGAACGTAGGCCTAAAAATAAAGGCTGAAATTGTT
TGGACTTTAATCATCTGATAGTGATAATCCACGTTTTTTCTAATGCATAA
AATTGAGACCttgtttttatatatcaaaatttagattattatttttattg
ccTCTTTTTTTATTGGGGACGTCTATAGAGTTCTCCACGATCGCAGCAAA
CACGTGGACATTGAGTCTTCATTCTCCAGCGAACAGATCCATATCTCCTG
CGTTGAGATTGACATTCTCCGCGTTTAGCTCTTGATTGACAATCATATTT
TGTATCTTTCAAATTCATACATTTTTCAGATTTAGGACCTTTGCAGGACC
CACACGATCGGGGGCAGTAGTATTTATAGTTATACGAACGGCATAAGCCT
TTGTTGAACTGAACGGCAATGCAAGCTCCCAATCGGTCACCACATGCTGA
Run BLAST on NCBI

transcript from alignment at scaffold_222:357702..372470-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052972 ID=TCONS_00052972|Name=TCONS_00052972|organism=Clytia hemisphaerica|type=transcript|length=14769bp|location=Sequence derived from alignment at scaffold_222:357702..372470- (Clytia hemisphaerica)
CTTCCGCGAAATATTTCTAAACAAAACTCAAAATATGTCAGATAAATACT
ATTTGAATGGTTACTTGCATCAAAGGAGCGCTAATAATGTGTATTTCAAC
AACCACGATTCATGATTTGGCAGTAAAAGCCACAAAATCGTGAAAATATT
GCCACCCGCGAAATTTTTGAATTTCGCGGAAAGGCCCAACCGCGAAATTT
AATCCCTGCAAAAGTTTATCCCATTAAAGTATTAATTCATTATTTGAAAA
TGCAGGAAAAAGGCTGTAAAATTGGAAAAGGTAGTCAAATCCCAGTAAAA
ATTACGATAAATGATACAAAAGATGTGAAAGTGAAAAACTCTTTCCTCTA
TTTCTTCTAGAGTAGAGAACGTAGGCCTAAAAATAAAGGCTGAAATTGTT
TGGACTTTAATCATCTGATAGTGATAATCCACGTTTTTTCTAATGCATAA
AATTGAGACCTTGTTTTTATATATCAAAATTTAGATTATTATTTTTATTG
CCTCTTTTTTTATTGGGGACGTCTATAGAGTTCTCCACGATCGCAGCAAA
CACGTGGACATTGAGTCTTCATTCTCCGTTTGTGGATTATGGATCGTTGA
GATCGATATCGAGATTGACATTCTCCACGTTTAGCTCTTGATTGACAATC
ATATCTTGTATCTTTCAAATTCATACATTTTTCAGATTCGGGACCTTTGC
AGGAACCACACGATCGGGGGCAGTAGTATTTATTATACGAACGGCATAAG
CCTTTGTTGAATTGAACGGCAATGCAAGCTCCCATTCGGTCACCACATGC
TGAAAAGTATCAAAAACAAGTTTATTGCCATGTCATGATTTGATCTACGT
GAGACTTTTTTATGAGATTTTTATTATAATTTGTGGAAAAAGTGAACTTG
GATTACAAAATTCTATTTTAAAATCCCCAAATTTTTCCAAGAAACATATC
CTACACGATAACTGCTTTTTTTTCATTTTAGTGATTTTTTACTCTACCAG
GTCTGACGCTGGAGCGTCAACACCATCCCTAAAATTTGTACAATCTTTGT
ATGATAATTAAGAAAAGTTATTTCATTTTCCAACCTTTTCCAGGCCGTTG
GGTCGTTGTTGTCATTTTGGTGGTCTTTGTAGTTTTTGGGCGCTTCGTTG
TTGTTTTAGTTCTTGTGGTGGTCGTTCGTTTTTTAGTCGTCCTTGTAGTT
GTAATGGTAGGTTTGACGTCACCGCAGTACTTCAAATTGATTTGCATTAT
ATCTTTCTCAGACAATTTATTTCCACCAAGTGATAAATCAGGGTTAGCTT
TCCATTCGATTGTGTTTCCATTACCATTGCTGAAAGCTCCTCTGAAAGAA
GAAAAACAATTGATTAATACTGAAATCGTTTCTTCGTAATAAGTCAAAGA
GATTCTTTGGACACGATTTTGTTTAAATAAAAGCTGAAAGGAGAAAACAG
ACTTTAATAAGATCATGTAAGAAACAATGTTGGCAATGTCTTACTTTGAG
AAATGCATAACAGAAAATGGATCGTATCCAACACCAAGACTGTTGATCCT
TGATGCAATCTTGAAATTGTGCTCACGACCTAAAAGATGAAAGAATTCTG
TCCATTTTTATCTAGCTACTAAACTGGATTAGAAATCCTCAAAAATGAAC
GAGTATCTAATTTCATATATTCCGCAACCGTTAATTTGGATGATTGACAA
TTTCAGAATTCTAAAGTTTCAGCACAATTTTTTTATCAGTTGAATGGGAG
GTAGGGTTGAATTGGGTCAGAGTGAGTGGGTGAGCGCGGAGAATCTCATT
TTTGGAGGCTATCTCTAATAACTCCAAAGATAATTTTACGGTTTTACAAT
CTGCAATTTTGTGAGCTTTGTCAGTATTCTTGAGTTGTTTTTTTTTGTGT
GTTTTGTTTCTACAGCATATTTTTTTTCATAGAATATAATTATCTTTTTA
TTTAAATATGATTATTTTTACATAGGACGAATAGCCATTGTAAAATATGG
AAGAGCCTGAAAGACAATTAATAAAATAAAATAAATAAAAATAAAAATAA
ATAATCCTAAAAATAATGCTTATAGGTCACTCTAATAGAGACACAATTTA
AAATTAGGTGATAAAAAGATGATAGAAGATGATTCATACCAGAGAAGATG
CATCAAAGTCTAGTTAGAGCAGTGTTGAAAAATAAATTTTACCTTCAACT
ATATTTCTGAAGATGATATTAACGTATTCGTCACGATCAGGTCGACTTTG
TTCATGATAAAATCCAATAGCATGAAGAAACTCATGAATGATCGTTCCTT
CCCATAAACACCCATTGCCGATGGAAAGACTTTGTCTACCTCCTGTCATA
CCAACCATTGACCAACAACTAGGGGAAATAAAAAAAGGTAAGGTTATGGT
AATGAAATTCCATGCTTTCGATGCATGGAATTCGATATTGGAATCAAAAT
ACCATAAGGGAACTTATTTTACCGGGTACTAATTTTGGTGAATTTCAGGG
GCTATTTAGGCAAGGAAACAAAAAATTTAATTTTGGCGGGAACTTATTTT
TGCGATGGAGCAAAATATTAAATTTTGGTGGGAACTAATTTTGGCGAGTT
TCGTCTAAATTAGTTTCCGCCAAAATAAGTTCCCTTAAAGTATGTTAAAT
ACAGAAGACTTTCCATACTCAAAAAGACTTTCCTATTTAAACTCAACTGA
CAAAACTGACAGATAAACAGTGATAATAGTTTCAATATTTTATTGCCAGA
ACATCTTAGAACATAGCCAGTACCTTCCCACAAACCAAATTTTTTCTTTG
TTTTATCGCGATAAAAAAGCGGTTTTCGTCTAACAGGCTACTTAGAACAG
AGAATTTTATTTACTTTCTTAGCGAAGATGAATATATAGGGACAGAACAC
TAAATCAAATTTGGTGTGGCATTTTCAGGCAATATAAAGATTTATTGNTC
ATTTTAGTGATTTTTTACTTTACCAGGTCTGACGCTGGAGCGTCAACACT
ATCCCTAAAATTTGTACTATCTTTGTATGATAATTAAGAAAAGTTATTTC
ATTTTCCAACCTTTTCCAGGCCGTTGGGTCGTTGTTGTCATTTTGGTGGT
CTTTGTAGTTTTTGGGCGCTTCGTTGTTGTTTTAGTTCTTGTGGTGGTCG
TTCGTTTTTTAGTCGTCCTTGTAGTTGTAATGGTAGGTTTGACGTCACCG
CAGTACTTCAAATTGATTTGCATTATATCTTTCTCAGACAATTTATTTCC
ACCAAGTGATAAATCAGGGTTAGCTTTCCATTCGATTGTGTTTCCATTAC
CATTGCTGAAAGCTCCTCTGAAAGAAGAAAAACAATTGATTAAGGGGGTA
GTCATATGAGATTTTGAAAATTGGTGAAAAATTTATCAATTTCGGGATAT
AGGGCTTTTTAGGATCCTTTATCCTTCCTGAACATACCCTGAAAATTTCA
AGGCCGTAGCATAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNTCCCTCTTATTCCATCCCCCCCCCGCTTATTAGAATTTAGAAAATT
TTCCTACCCCCCTGCTTATTCGGACCCCCCCGTCTATTCGGGAGACAAGA
GTATCACAATACCAGATAATAGCAAGTATGCATCTGTTTTTTTTCTTCGG
TAGAGACTTGTAGTTCTCTGCTATGTCTTCATCTTGATTAACTTGATGAC
GTCGGTAAACAAGCACTTTTACTTTTATTTTGCTGTTCAGAACTGCAGGT
TATTTAAAATCACCTTGTCACTCTACCGTCCTAAAAAGTATGTTAATACA
TAAGCTGACTCTAATATTTTGGAGTCTATTAGTAAGGTTAAAGACTGGAT
GAGGTTGATTTTATTGGAATGTAACGTTGGTATCAAAACGCCTTTACTAT
TTAAAAAAAGTATAACCTCGACGGTTTTATAATTGAACAATTGCTTATCA
ATTAGTCNAAAAAAAGTATAACCTCGGGGGTTTTATGATTGAACAATTGC
TTATCAATTAGTCTAGAGCTAGACTACTAATTAACATCACTTTTACTCAA
AAGCTTCTTTTCAGTAGTAGAAAAACTTTCCCGTAAGGCCTTTTTTCTTC
TTTTTGACTTTGAGGCAGGATCGCTCCTACGTTTTGTGTTAAAAGAATAG
TGGTCTGGAAATCCAGACTACTTATCATTAGAAATGTACTTACTAAAAAC
AGTTGAGATGGTGTAAGGAACAATGCCTTTCGGCCATTGACCCCGGTCCT
TTTTCAAAGCAGCACGATTTTGCACTTTGACAATATCGCCTTCTTCGAAA
TGTTCTTTATCGAGATCTAAATGTAGAAAAAGTCATAAATAACGTTCAAA
ATAGACTAAATTAGTCAATTTGCATCATCAAAATAATTGATACTGTATAG
GAAAAAAATTCTCGAATTGAATGCTCGAATAACGAAAGAAGTGTATACCA
ACCTTTATCAGCATCATTGATGTAGTCAAATGCTGGGTTCTCTTCCCCTG
GATGGTTCAAAGGATGACTGCGTATGAACACAATCATACAAAGAAATACA
AAAATCTTCATCATATTTGAATAAAGTGAAAACTATAAAATTTCTTCACA
AAAGATATATTGTTCAAAAAATCTTCTTAACCCTTTGAGTGCCAGGGTCC
TTTTTTCTAAGTTTTTTTTAAAAAATCGCTAGTTCAAACTTTAAGGGCTT
ATATCTCCTGATCTAGAAGGAATTAGAAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATTTCTAACTCA
AACTGGGCATTACAGGAGGGCTTCGCCCTCCTATATAGCCCATGTCGTAT
ATATACGACATCGGCACTTAAAGGGTTAAAAGAATCTTTATACAATTTTT
CACTTCACCAAAAATTATACCAAAAGAATGGCACGCCGATTTCGCTTATA
AGCTTACAATTGAAATTCTTTCTATTAAGAAAAACCTAGAGAAAACGCAA
CCAAATCGTTTCCGACTTTTGATCAAACAAATCCTTCAGATATTTAAACA
TTCCTTCAGGAATTTACCTTCACAAAGAAAAGTACTTTTCCAGCAAAAAC
GTAGCAAAAACGTAGCCAAAACGTTTCGGACTTGATCAATAATTCCTTCA
GGAATTTACCTTCACAAAGTAAGTACTTTCCCTGCAAGAAACGTGATCTC
TTCAGGAATTTACCTTCAGAAAGAAAAAGTACCTTCCCCTGCAAAAAACG
TGACCAAAACGTTTCGAAAATTAACGAATTATCAAATATCAGAAAAGTTT
AAATAGCGAAGAAAATCTAAAAGAAGCAGATCTGAATTGGACGTGCAACA
AGAAGCACATGTCGCAAAGAGTCAACAATTGGAATTGGAAGGAAAGCAGA
AGCTTTGAGCAGCGAGCCTTACTTGGGGGTAATTGACTATTTATAATCAA
AAATGCTTTAAAAATGGCATTCTTAGCTTGAATAGCAAAATTCCATGATG
GTGATATTCTTAGCATATTCTTAATTTTTTGACCATTTTCATCATGGACA
TTGTTATAAAGTGTATTCTTATAAAAAAAAGTGTGTAACAAGAAGGGTAC
TTATTACACAATCCTAAGGAGTGATTGTAAGATAACGTCTTTTTTTCTTT
CTTTTTCTTTTTTTGTCTCGACTGAGGTCGAGCAATGATGATGATGATGG
TAAGATAGCGTTCTGATTTTCAAACCAAATCCATTACACTTTATATACCA
AACTTGACATCTAATAACCAGAAAAATTGAAACAATATTTTGCGTATTGG
AGAATCTTCAAAGGCGGAGATACGTGCCGTGATTTTGGAAAGTCAGTGCG
TCTTATTGTCGTAATAATGACGTTATATTTTACCGTCGGTCAGATGTAAT
ACAAAGTACGATAGTTTGTCATTTTTCCAAATTTTAGTAGACTTTGGCAG
GATGAAGTTGATATCATTCCACTTAATCTTATTTGCGACCTTATTATAAG
AGTAGCCTCGCTAAGAATACCAGTATGATTACCCAACGAAGACATCCCTG
TCTCACAGTTCCGTTAAAATTTTTCCTACAATGGGGGTAAATTGTTCCAA
GATAAAAAGATCCAGTGGGGAAGGCTTTGAAGTGCAATTTTTAAACATTT
CGAATGGGGGATGAAATCAAAGTAAATTTACCAGTGGGGCTGAAATTCTA
AGGTATTTTTCCCAACGGGGACGAGATTTTTTGCCAAATTTTCCAACAGT
GGGACTGAGGTTTTAATGGGTATGTGACATATTAGATACTTTAACAAGGG
GAGAATACTCTAATGAAAGCTCCAGGTAATAACAATACCTTTGTGACCTT
TATGATTCTGTTCCATTGGCTACAGAACATTCCCGCCGACCCATTTTAAT
GAATGAGAAATTCAAAATTCTTCTCTATAAAGCTCGAAGGGCTAGATGTC
GTGCTTTAAGCCATCGCAGGCAAAAAAAAGTGAATATCGGAAAAAATATT
GTTGCTATTGTTTTATGCAATTTATTGCTATTTATTATGGTGACTTTAGT
AGGGTTTCCTACCTAACCACGACACACTTCTCAGCAAAAAGTACGCCATC
AAGCCCTTTGGGCTTTATAGATCTATGGGTCAAACAAGGCCTTTGATAAA
AGGTTGTGATATAGCTGACCTTCACCAAAAATCAAACAAAATCTTTAATT
GGTTAATCCGTTAGTCACCCAGCTAGCACACAACGTTCTTTCACCACCAA
TCTAATGTTCACAAACATTTATACACCCCCTCATACCCACTGAGAGAGAA
CCCTTCCCACTAGTAAAATTGTCCAAAATATTGTCCCCGGTTAGAGATTA
TCCTCCAGTTTTTGTCCCCACTGAAAATAATCAAATAAACCAATCCTCAC
TGCAAAATATTATGATATTGAATATTATGAAATCCCCAGCCATAAAAAAT
ATGGGAATATCAATCCCCGTCGAGTTTCAGTCCACTATTTTCATCCCTAC
TGGATGAGAAAATCCTACCGGGTCTGTGAGAAGGGGATGTATGTATTTGG
AAAAAAGACACACTTAATTCGCCGTCTTCCTTACTACAGGGTGAGTCTTA
AATTTGATACTTTTTGGCAGATTTTAGGTTCATTGAATTTACTGTTCAAA
TAATGCTCAGTCATCAGCCTCGGAGGAGGCTGGTACTAGGTTTGCGATGT
GATTAGGTGGTAACCAAATCAAAGTGCGAAAATCGATACCCTTCGAGATA
ACATTTTTCCCGATGTCCAGCCAAAGTTTTTAAACTTTATTTATCCAAAA
ATTTTGACCATATGACAGCTTCAGTAAAAACAAGATAAAACTTAATACGA
AAATTGATTTTGCCATGAATCAATGTGGAGTCAGATCACAAACAACAAAA
TTTTCATTTTTTGAAAAGCTAATATTTTGCTTCACAACAAAAGCATCGTC
AGAGTGATAGTAATACTGAAAATGTTGAACAAATTTTTTAAAAAAATCAA
AAATTAACTAAAGTCTGTCTCGAAATAATTTGCAGCTGGAGAAAAAAATG
GCTGTAACTTTTGATAGAATTCGAATCAAGTTGCGGTTTTGTGCTCGTTA
AAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAATATCTTTTTAACGAGCACAAAACCGTAACTTGATTCG
AATTCTATCAAAAGTTACAGCTATTTATTTCTCCAGCTGCAAATTATTTC
GAGACAGACTTTTTTTAGCGGAACAAATTCAAGTCTCTAGAGGCTTTCAA
ACCCGAGTCCATTTCCCTGTTCATTTCTGGTTTTTTATCTTTAATTGCCA
ATGCCTCTTTAAACAAAAGAACAGACCAATACACCTTTCCCAAGTTTATC
GATTTTTTTCCGACCTCTCTAGTTTGAAACGAGAACTTGATACTTTTGAA
ACTTTTGGTGATACAAAGTCATTCTGAAAATTTGAGATCAAAAGCTTTTT
CCGTTCCTTTTTTATGGCTGTTTTAATTCCTTTTTTTTTTACAGTCAAAC
CTCTCTTAAAAGATATTTTATCCTACCGGGCCTCGTTTCTATGCCGTTTC
CATGGGATACTTTTGTTTAAGGAAAAACTTTAAAATTGAAATATCTCAAG
AACCGGAAGAGCTTTTAACATAATTCTTTTTTTGTTGATTTTGTATTTCG
TAGTAGAATCTTTCTAAATTAAACAAGACGACTTGAAGTCGAAAATTTCG
CCTAAAGTTCAAACTGCATGGGAAAAAACAAGAAGTAGAGATGGAAGCTA
ATCTGAAGTCTACTTTACATCGAGCCTTGATGAAACAATTTTATATGAAC
AACGAGGCTCAAAGTCGCTAAAAAGATAAGATCAATTTACGAACAATGGT
TGCTTAATTCTTAAGAACAGCAAGTTACGAACATTTTTCCCCGACGAAGT
TTTCCCCGATAAGGTAAAAATGTTCATATTGCGCGCCATCCCTTGATTAC
TTTGTAAGAACTAATTACCGAAGGGTATATCACCGTCTATCAAGAGTTAT
TGAGTTGATTCTTATAAAATATATGCTTATAAGAAAAATAAATATGCTCA
TATTGCCCGCCATCTCTTGTTTACTTTGTAAGAACTAATTACCGAAGGGT
ATATCACCGTCTATCAAGAGTTATTGAGTTGATTCTTATAAAGTGTATGC
TTATAAGAAAAATAAATATGTTTATATTGCGCGCCATCCCATGTTTACTT
TGTAAGAACTAATTATCGAAGGGTTTATCACCGTCTATCAAGAGTTATTG
ATTTGATTCTTATAAAATATATGCTTATAAGAAAAATAAATATGCTCATA
TTGCCCGCCATCTCTTGTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCCCTTGTTTA
CTTTGCAAGAACTAATTACTGAACGGTATATCACTGTCTATCAAGAGTTA
TCGATTTGATTCTTATAAAGTATATGCTTATAAAAAAATGAATATGCTCA
TATTGCCTGCCATCTCTTGTTTACTTTGTAAGAACTAATTACCGAAGGCT
ATATCATCGTTTATCAAGAGTTATCGATTTGATTCTTATAAAGTATATGC
TTATAAGAAAAATAAATATGCTCATATTGTGCGCCATCCCTTGTTTACTT
TACTTTGTAAGAACTAATTACCGAAGGCTATATCACCTTCTATCGAGAGT
TATTGATTTGATTCTTATAAAGTATATGCTTATAAGAAAAATAGATATTC
TCATATTGTGCACCATTCCTTATTTACTTTGTAAGAACTAATTATCGAAG
GGTATATCACCGTTTATCAAGAGTTATTGATTTGATTCTTATAAAGTATA
TGCTTATAAGAAAATAAAGAAAAAATCCAAACTGTGAAGCTAAAGAAACA
AAGCTATATGACGTAATCCAAAGAAAACGCCCGAAAATCGTCCGTGGTTA
TACGAGCGTGTAATTTGTAAATTGAATTTAGTGAGTTTGTCCACCGTATC
GAGTACTTTCGTTTTGTAAATTTTTTATTACACCGCCGCCGCGAAAGGCT
ATCGTAATACTTTCGCTAGGCGAAATTAACTAGGTCACAGTGTGGATCTA
AACCACACTGAAACGACCGCCTTCCATCACGCATCACGCTCGCGAGAGAG
TGCGCGCACATTATTAACGCCTACATGTCATCTCCAGTACATTTTAGATT
ATTCATTGAAAACAGATTACAATATAGTCATTTTTCATGTCTCGANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
ACCCGAAAGTAAATGGTAGACAAAGTAATGAGCCAAGGCAAAACGAGATT
AGCGTACCACTATGAAAGAAACCGCCTCCGGCGGTCGATAAAAAGTAGAG
CAGGGTTTTGGAACAGTGTTTTTCAAAAAGTCGAAAAAAACTCAGGAAAG
GTGTATTATGGCGTTTGTCAACAACTCGAATGTTATTGCAAACGTGATCG
TTTATCAAGTATTTCATCTTCAGTGAGCGATTCTGTGACGTCAATCATCA
ACAAGAGGGAATCTAGATAGTTAATGCTATTTGCGATTTGCTATTTAAAT
CTTTGATTGCCAATGCCCCTTTAAACAAAAGAACAGACCAATTATGGCGT
TTGTCAACAACTCGAATGTTATTGCAACCGTGATCGTTTATCACGTATTT
AATCATAAGTGAGCGATTCTGTGACGTCAATCAACAAGAGGGAATCTACA
ATCAGTGACAAAATACTTGGCACAAAAGGGAAATTCACCGGGGTGTTTTG
AAACCACAATCGATTTGTATGTGCTCTAAAGTAGGTTCGAAGGGTAGAGT
TTTAACTCTGAGTTTTAACNGAAACTCTCCCGCCGTTTTTTTTCGTATAC
CGCCATAACGCCATACAGCCATTTTTCCCGCCTTTATTATCACTGTAACG
GACGATAACATCGTCTAGTAACCCTGCTGAAAGAAGGAGGTAGAAGGTGG
TTTGAAAGACAAGACAATTCCAAGATTAATCATTTGTAAGTTTGTTTACT
TTAAATGGCAAATAGATAAATCAAGTAAATAAATAAATAAATAAATAATT
TAATGAAGCAATAAGCAATCATTGCTTTCGATTAATTTGTTATAAATGAT
ATATTGCGATATTGTTTCATTAATTGAAAATGCAGGAAGAAATTGGAAAA
GGTAGTGAAAATTCCTGTAAAAATTACCATAAGTGGTATAAAAGATGTGG
AAGTGAAAAACTCTTTCCTCTATTTCTTCTAGAGCAGAGAACGTAGGCCT
AAAAATAAAGGATGAAATTGTTTGGACTTTAATCATCTGATAACCCACGT
TTTTTATTATGCATAAAATTGAGACCTTGTCTTTGTGTATATCAAAATTT
AGATTATTAATTTTACTGTCTCTTTTTTTTATCGAGGACGTTTGTAGAGT
TCTCCACGATCGCAGCAGACACGTGGACATTGAGTCTTCATTCTCCAGCG
AACAGATCCATATCTCCTGCGTTGAGATTGACATTCTCCGCGTTTAGCTC
TTGATTGACAATCATATTTTGTATCTTTCAAATTCATACATTTTTCAGAT
TTAGGACCTTTGCAGGACCCACACGATCGGGGGCAGTAGTATTTATAGTT
ATACGAACGGCATAAGCCTTTGTTGAACTGAACGGCAATGCAAGCTCCCA
ATCGGTCACCACATGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033451XLOC_033451Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052972-exon-scaffold_222-1575043694:371912..372470TCONS_00052972-exon-scaffold_222-1575043694:371912..372470Clytia hemisphaericaexon
TCONS_00052972-exon-scaffold_222-1575043694:357702..357942TCONS_00052972-exon-scaffold_222-1575043694:357702..357942Clytia hemisphaericaexon
TCONS_00052972-exon-scaffold_222-1510915933:371912..372470TCONS_00052972-exon-scaffold_222-1510915933:371912..372470Clytia hemisphaericaexon
TCONS_00052972-exon-scaffold_222-1510915933:357702..357942TCONS_00052972-exon-scaffold_222-1510915933:357702..357942Clytia hemisphaericaexon
TCONS_00052972-exon-scaffold_222-1491911889:371912..372470TCONS_00052972-exon-scaffold_222-1491911889:371912..372470Clytia hemisphaericaexon
TCONS_00052972-exon-scaffold_222-1491911889:357702..357942TCONS_00052972-exon-scaffold_222-1491911889:357702..357942Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:357702..372470 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.778285	0.973648	1.48966	1.94335	1.4428	0.189962	0.342636	0.00357613	0	0	0	0	0.553177	0	0.0684106	0.127202	0.151533	0.0719506	0.280186	0.469353	0.0451141	0.60547	0	0.282457	0	0	0.260893	0.129234	1.63325	1.10074
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052972 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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