TCONS_00053327 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053327
Unique NameTCONS_00053327
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1682

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053327 ID=TCONS_00053327|Name=TCONS_00053327|organism=Clytia hemisphaerica|type=transcript|length=1682bp
TTCACGCGTAACTCAAttgaaataaacttttaaaaacaatttgattttga
tttttcagcaGCATAGAAAGAAACCATGTCATGTCAAGGAATAAAAACAT
AGTTTTGGTTTTAAGCTGTGCATCTTTTAGACATGTTTCTGCTTTATCTG
TTTTTAATGGGAATTTCGTCCTCATTTTCGCAGAAATGTAAAAGACAGGT
TCCCGAGAACAGACATGGCATTCGACCAATAGTCATCACCAACAAAGCTG
AAGCTGTTCAAcaaaataatctcaaaaagACATTACCCATTTTATCACCG
GAATGGGAGGTCGAATTGAACCTGACAATGAATGCAAATCATGTAAACAC
TGGAATACCAGGAGGGGATTGGTGTTCAGTATTCCATATGACAAAAGGCG
ATGAACTAGGCTCTCATGGCGATCGTACACCGGCAATATATCATTATAAG
GTTGATGGGAAAATATGGCTTTTTTCATCTGTAGGGAATGATTTCGATCA
TAGCTTCAATCGTCTTATCGAGTTCAATAACCAGTACCATATAAAGATCA
GCCAAAGATATAAAAACGGAGGTGTTTACGAGTATTCGATTGAAATAAAT
GGAGAAAAGGTTCACGCTGTGGATAATCTAAAAGCACGACAATTTTATGG
AGTCAAAGTTTACCTCGGAAACCCATGGAAGACACCGTGTGTTGCAACGA
TAAGCTATATGAATATCGTGAATTTCCTGTAGATTTTGATCAGAGAATTT
TCACGATAGCGTGACAGTACTGActtcaaaggaaaatatttttgcgtCAA
AAAATTATAGGGTTGCTTGTCATTCTCCATTAGGGGCCACCTTTTCTTCT
TTATAAGAGGTACTTTACGTGTGTGTCTACAAATTGCCTTCGTATCTGGC
AAAAACATTTTGGCATACAAGTatggaaaatcttttaaatttttgagctt
TCACTGTCTGTTTATCGATAATCAAAAATTGTACGTCTTTCTAAGAAAAC
CATAATATCATAATTTAGCACTTCGTTTGTTAAACCGTCGAGCGTCTAGA
ACTCGAATCTGCgcgaggaacacaaatttgttcgagttaaggaattttcg
agttatggaataaGATTTAAGGCAAATTGTTATTTGAAGCGACGAgtaaa
cttgttcgagttaacgAGAAATTAGAGTTAAAGTCTCTACCGTACTATAA
TTTTGCACTTGTTCGTTTGTCGATAAAGGTTCAATTTCGCTGTACTCTAG
CTGAACTTTTTAAAGGTGTGTATTTTACGGATCGGAATATAAAAAAAAGC
TGAAGGGATATTTAATATTTGACTAGGTTGTGAACATATCGTACTAAGGG
TTTCGAAAACGGTCGTTGAATGATTGAAAACCTATCATTTTTTTGACGAA
CATATAATGCAAAAGCAGccgagattttttagaaatatgtgttcttatct
taagagaccaaatgttatgaccATTAACCATTAAATTTTCCATACAAAtt
atgtgttctgatttctatcgccctatttgtctccctaaacttatcattac
tttatggtttgatgtgctctaaaatctaggaaaaacagtttgccaagata
aacttgtaatatatttgttttgctccacgaaagatgtgttatGAAAattt
actaggcaacaagattacataaattttctctt
Run BLAST on NCBI

transcript from alignment at scaffold_228:280479..293631-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053327 ID=TCONS_00053327|Name=TCONS_00053327|organism=Clytia hemisphaerica|type=transcript|length=13153bp|location=Sequence derived from alignment at scaffold_228:280479..293631- (Clytia hemisphaerica)
TTCACGCGTAACTCAATTGAAATAAACTTTTAAAAACAATTTGATTTTGA
TTTTTCAGCAGCATAGAAAGAAACCATGTCATGTCAAGGAATAAAAACAT
AGTTTTGGTTTTAAGCTGTGCATCTTTTAGACATGTTTCTGCTTTATCTG
TTTTTAATGGGAATTTCGTCCTCATTTTCGCAGAAATGTAAAAGACAGGT
TAGTACGATTCATTACCAGTGTGTACCGAAAAAAGCGTACAAATTTTTCT
TTGAAAATAAAAAAGCATTATCCAAACTGGGCTTTTAACAATTGAAATAA
GATTGAAATTCTCTGTTCAATCAATATATATTCAATTCCTAAGACGAGTG
AAAATGTTTTAGAGATTGAAATATTAAGTAAACAAGTTATAAAATCTCGC
ATTTTTCATGAGAATTTTACTTTGTACAAAAATTTGTCCACTTTTTTGGG
AAACTGTACAGTGTGTTCGTAAAAAAACGAGCAGATTTTTTTATAAAGTT
CACTGAGTTCAGAATACTTAAATCAGAGGGAATTTCTTTGTTCAATCAAC
TGTTGGCTCAGACTTGGATTTTCTTGATTTTTCAAAAAAAATTCAAGCTT
TAATGTTCTTACGATATTCTTAACACGTTTAGTTTCTTTACTTAAAATCT
AAAATAGTTTTTATTTAAATCTGTTAAAATTTTTTACTTTAGCAGTAATT
TCTGAAATCTGAGGTCAGGATTGTTCTGAAATTGTTTTTAAGTTTTGGCC
AACTTTTAGCTAAAATTGTTCGCTAAGGCTTGGAAATGGAATTATTGAAA
TATTGAAATACATCTTGCATTTTAGCAGGGATTTCAGTTTCCAAATGGGT
AGATATAAAGAAACGCAAGACCAAAATGATTTTGATATCCCTGAAGTATT
TACCATTGCAAAAAGAATTTTGGTCTTAAACTCGTCGTTAAGCTCGTCTT
TAAAAACTTTCATTTTGACTTTTGACAAAAATTATTTTTTCTTGCTAAAA
AGAGATCATAGAAGACGAAATGGTATTATGAAAAACTGAAAAGCTTAAGA
TTTATTTTGCTCAAAGACCTCATTGAAGATTTCCATCTCTCAAAACTTCA
GAAGTGTGAGTTTATTTATTGAAACAGAGGCCGTTAAACGGCATGCTACC
CAAAATTTAGTACAAATAAAAAAAAACAGACCTGAAAAGGCCCTAAATTT
TTTTTCCTCCTAATTTTTGCCTTTAGTGCGATTTTTAACAGAAGGCCTCG
CAATATTTAGGACTTCTGATCTTAAATTGGACCTCACAATAGGTTAAATT
TTTATTAAAAAATAAACAATACACCTTGAAGTTTATGACTTCAGCCCCCT
CCCAAAAAAGGCTGTTGACATCCTACCCTACTCGAGAAAACAGAATAAAA
TGAGAAAATTGAGGAGTTTTAAAGAACAGTTTCAAAATCAAGGGGGGGGT
GAGTTTCAATGAACGTGAGAACCCTGCTATGAATGATATTCTCCAAGATG
TTTTAAATTGGTAGCATCTTTAAATTTTCTAAATGCCAAGTTAACAAAGA
TTTCTTTTTATGTAGGTTCCCGAGAACAGACATGGCATTCGACCAATAGT
CATCACCAACAAAGGTAACGTGAATTTTGGAGAGTAATTATTTAAAGTCC
GTTCGCTTTAAGTATACACTTCTCTTATTTAATAAACTTCAACTTCTTTT
AAACGCCTTCCCTTTGAAAAACCGAAATAATTTAATAAACATTGGTCAAA
AAGAGTACAATATATCTTGTATTTTACATGTACAAAATATAAATTGACGC
AAAGATGTTGTTGCATTGTTGTTGCAGTAGCAGCAATCTAACGTGATTTT
GCTAAAAAGAAGTGTCCTCCGCTTTATTCCAACACAAAAAGTGCATATAT
TTGGGTCACCGATAAACCCCTTCCCTTTGAAAGACTGAAAAACTGAAACA
ATTAATATCTTCTTCTATAAAAAGTGCTAAGTTTTAATAGATAGTTAACC
TTTTTGTTTCTAAATTTTTCAAACTGTCCGCAAAGAATTGAACTGTTAAT
TTTTTCAGAAAAATTCTGTTTTTCTGTGAAGAATTTGGATGAAAAATTGG
TCAAAAAGCACTATTTTCAAGATTTTGAGATAAATGAGCTTTTAGAAAAA
TTTTCCGAAGATATATTTTTATTTCGGTAAAAGATACACGGTAAAAATTT
TCAAAATGTTTTTTCTTCGCCAAAAATAAGTTCTTCAAAGTTGAAAAACT
CTTCTTCGCAAAAGTCTTCATTTTCTTCTTCGTCAATTTTTTTTATTGCG
ATTCTTAAATTTTCAGACTCAAGGATAATTGGCCTAACAGAAAATGTATA
ACATGCTACCATTTTGTGTGCTGCATCAAGTAGAAATTTAAATTTTGTAC
GTGGCAAATATTAAAAATTAGGGCCCTTAAGTATCTATATGTTAATCTCC
GCCGGCTTGCGGAGAGAAATGAAAAATCTGTGCTCTAAAGGCGAAACTTT
GCAGTGGAAAATCTGCGCAATTTAAACGTTGCAGAATTTGACAAGAATAA
AATTACAGATTTTCGCAGCGTTGAAATTCAATGTTATTTTCCGACCCTGA
TACGATTCCAAATGCTGAATAATCTACTCAGGAAAGAGAATGGAAAATAA
ACTTTCTGAGCAATCTAGAGCGTAAAAAATCAATTTAATCTATTCTAGCT
GAAGCTGTTCAACAAAATAATCTCAAAAAGACATTACCCATTTCATCACC
GGAGTGGGAGGTAGAATTGAACCTGACAATACATGCAAATCATGTAAACA
CTGGAATACCAGGAGGGCATTGGTGTTCCGTACTCCATATGACAAAAGGC
GATGATCAAGGTTTGCATGGCGAGCGTACACCGGCAATATTTTATAATAG
TATTGATGGGAGACTACAGATTGCGTCCACTGTAGGAAATGATTTCAACC
ATAAATTCGATCTTCCTATCGAGTTCAATAACCAGTACCAAATAAAGATC
AGCCAAAGATATAAAAACGGAGGCGTTTACGAGTATTCGATTGAAATAAA
TGGAGAAAAGGTTCACGCTGTTGATAATCTAAAAGCACAACAATTTTATG
GAGTCAAAGTTTACCTCGGAAACCCATGGAACTTGCCATGTGTTGCAACA
ATAAGCTATATGAATATCGTGAATTTCCTGTAGATTTTGATCAGAGAATT
TTCACGATAGCGTGACAGTACTGACTTCAAAGGAGAATATTTTTGCGTCA
AAAAATTATAGGGTTGCTTGTCATTCTCCATTAGGGGCCACCTTTTCTTC
TTTATAAGAGGTACTTTACGTGTGCGTCTACAAATTGCCTTCGTATCTAG
CAAAAACATTTTGGCATACAAGTATGGAAAACTTTTAAATTTTTTTAGCT
TTCACTGTCTATTTATCGATAGTCAAAGATTGTACGTCTTTCTAAGAAAA
CCATAATATACTTCGTTTGTTAAACCGTCGAGCGTCTAGAACTCGAATCT
GCGCGAGGAACACAAATTTGTTCGAGTTAAGGAATTTTCGAGTTATGGAA
TAAGATTTAAGGCAAATTGTTAATTGAAGCGACGAGTAAATTTGTTCGAG
TTAACGAGACATTCGAGTTAACGAGACTCTACCGTACCATAATTTTGCAC
TTGTTCGTTTGTCGATAAAGGTTCAATTTCGCTGTACTCTAGCTGAGCTG
GGGATGTCAACTATGATAATCGGAGAGGCACGTGTCTGAATCTTTCTGAA
TTTACTTGTTGTTGACAGTCATAAATTTTTTTAAAGGTGTGTATTTTACG
GACCGGAATATAAAAAAAGCTGAAGGGATATTTAATATTTGACTAGGTTG
TGAACATATCGTACTAAGGGTTTCGAAAACGGTCGTTGAATGATTGAAAA
CCTATCATTTTTTTGACGAACACATAATGCAAAAGCAGCCGAGATTTTTT
AGAAATATGTGTTCTTATCTTAAGAGACCAAATGTTATGACCATTAAATT
TTTCATACAAATTATGTGTTCTGATTTCTAAGAAACCTTTATCGCCCTAT
TTGTCTCCCTAAACTTATCATTACTTTATGGTTTGATGTGCTCTAAAATC
TAGGAAAAACAGTTTGCCAAGATAAACTTGTAAGATATTTGTTTTGCTCC
ACGAAAGATGTGTTCTGAAAATTTACTAGGCAACAAGATTACATAAATTT
CTCTTGATTATACGGGGATTATACGTGTCTACTTAAAAGATATGTTCTGA
AGCTTTCTAGGGCTACCTAGACAACAAGAATACACAGTAGATGACCTTGA
TTATACCACTGTCTCACCAGAACACATCATCATTTGTAGCTGATTAATTT
TCGAAGATCTGGTCAGAACAGATCAAAATTTCTAGCTGAAATATGGTCTC
AGAACACATCGGAAAAAAGGTCGTCTCGCTGGCTGCTTTTGCATAATGGG
ACCAAATTCCCGAAATGATTTTGTGTCTTTGGTTTTCCGCGGAAACTCCG
CCCGTATTATTCAATTTTTATTTCATTCCGTAAAATCTGTAAAATATAAT
ATGTAAATATATAAATCATTTCACTTGGTGGAAAAAATAACAAAGTTTAC
TAATTTATTCCCAATGTTTGAAATGAACATTAAATTATATTGTATCAAAT
TGTAGTTTTATTCTGCCTGTATTGAAAGTAAACAAAGGAAATTTATGACA
CGATTCGATATACACGTTGTTTTTTTTTAAGAAACACACTTTTAAGAAAC
ATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTAAGAAACATGCTGA
GGCTGAGAATGAGAAAATAACATTTTTTAATTCGGTATTTTAACAACCTT
CCAATCAAAACAAATGTTTTTTTTTCTTTGTATGAAAAATAGGCTGATTA
TGTCAAAAAGTTTAGAAACATGTAAGAAACATTTTTAAGGGTCAAAAGGC
CGATTTCTTAAGAAACATTAAGGCTGCTTGGTAAAACTAGTTTCTTAAAA
AAAAACGTGTAATGCTGTAATCTGTACTCTAAATCCTCCAAAATAAGTTT
TTCACTTTAAATCTAGATGGTCTATCGCATGTTGTTCATTGCTCTAAATT
TATATTTTTGTATCGCTATCCCTTGAGATTCTATAAAACGTTAAGAAATC
TAAAAGTTTTTAAAATTTGATAAGGTATAAGTATAAGGGTGGCATTTAAT
CTTGGGGTACACACGTTTTTTTTATAAGAATGGTGTATATTCAATTAATC
ATGGATATTCTTAACTAATTGGTCGAAATCATCCTGAAATACTCTTAAAG
TATTCTTAGATTAAGATGAAAACATAACCTAAATCTAGCATGCAATATAT
GCCTCAAGGAAGAATTTGGGAACTTCTTAGAACTTCTTACTCTCGGGTGC
CTAATAAACGTTTATTTTTTTCGTGTCAAATTTCCCACCTGTACGCAACT
TATTAGGGCCTGTACGTTTATTTCTTTTGAAGAATTTTCCCGCCTGTACG
TTTATTCCCGCTTGTACGTTTATTCCCTCGTGTACGTTTATTTATCTTGA
CACAATATCGCCCGATTCATACTGGAAAAAATTATGTGGTCTTCTAAAAA
CTGATATAAAGTATTGACTCAATTAATTCATTCGTTACTTACAGTAATAA
AAGATTATTTAAGGGCTCTGACCATAGTGAATTTTTAATACTTGCCACTT
GCAAAATATGAATTTCTTCCTGATGTAGCGGACAAAACTTTGATATATTA
TACATTTTCTGTTAGGCCAACTACCCGTGAGTCTGAAAATTTAAAAATCG
CAATGAAAAAAATTAATGAAGAAGAAAATGAAGCTTTTGCGAAGAAGAGT
ATTTCAACTTTGAAGAGCTTAGTTTGGGCGAAGAAAAAACATTTTGAAAA
GATTTTTGCGGTAGATGGTCTATTTTTTATCGAACTAAAATTATAAATTT
CTGGAAAATTTTTCTAAAAGCTTATTTGCTTCAAAATCTTGAAAATAGTG
CTTTTTGACCAATATTATTAATGTCTTTTTAAAGTTCATAACGTCATTTT
TGCAATTAAGTTCTTAATTACTCTTAAGGGATTTGATTAAGAGGCAATTT
ATAAAAGCGATTCTTTGTTAAAAGTGTTAAAGCATCTAAACATAACTTTT
ATGTTCAGATACTAAAATCAATTTTCCGACTATGGTCAGAGCCCTTAAGT
ACTTGTCAATGATCGATAAGAGATATACCTATACTTAAGTCAGTCTTTTT
GACCTGGATGTTCTACTTTTGAAAAATTGGTAAATTTTTCCCTGTACGTT
TATTTTAACTCTGATTTCTCGCCCGTTCCTTTATTTCAGCCTGTACGTTT
ACTGTATTAATTCCAATTTTATCTCCCCCCTGTACGTTTAAATTTTGGTC
TGTACGTTTATTAGGCACCCGAGAGTAGCATTGCTTGGGAGTAAATGGCA
ATATACAGGTAAAAGGCAAGGTAAAATAATCTAATCTAATCTAAATATCT
TAGCTTCAGTTGCCTAATTCCATGATAGCAATATTCTTACGATATCCTTA
ATTTTTGGGCATTTTCATCATGGACAATATCTTATAAAGTTTATTCTTAG
AAAAAAAGCTTATGATGGATATTTTTTAATTTCTTTTGTCCATTATATCG
TTAAATTTGTCTGATTTTAGGGAAGCCTTAGAAAACATCATTGATGGTCA
CACCAACCTCGCCCCGTGTATTCCAGGCTTTATCTACGTAACTGGTAGAC
GCCAGGGAACACCCTAAGCCAGGCTGACAGCTGCAGCGCAATGACTACAA
AATAGAAGAACGAATAAAATCTGACGTTTTGTTTTTGAATTACGTAACCT
TTCGCATTTGAAAACCAGACAATATCAGGGTATAACGTAGCTAGGATTTC
GATAACCGCTGTCAATTGATGGGGAATTAAAGTAAATTTTCTCTCAAGAA
CTCTTTGGAAAACTGTATCAAAAAATATCAACAAGGGTTTTTTAATTATG
AAATAGTATTGTCAGGAATTCCGACAACGGCTGTCAAGTGGTAGAGGATT
TGTAATTTTTTTTCTATAGAAGTTTCAGCTTGTTAATTTCGCTTAGCGAA
AGTATTACGATAGCCTTCCGTGTGTCTGGCTGGCGAGACATTTTTTAGGG
CGCAAATTATGGCGTGGGCGTTTGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACAGTTTTT
TATCCGATGAAGTTTGATTGGTGTTCGATGAGTTTGGTTAGTAAAAGTTC
CAGCTTTTCCTCCCCGATGGGATGATAGATATTGGCTCACTCTTTAAGCT
TTAGCGTGGGCGTTTGCTAATAAGCCTTCGGAATGTAAAAAGAATGGGCA
ACAAGGTAATAAATCAAACTAATCGAGCTTCAATCAAACTTCACTGATCT
TGACACACCTTTTGCTAATTAGGATTTTCATTTTGAACCATGGTACATTG
TCTGTATTAGATTCCCATTTCCGCACTAAGATTCTTGCTTACTTTTCTGG
AATCTTTCCCCTATATATTTTTCATGGGATAATCGGCAAGAGATTGGGGA
GGGTTTGTTTAATGGGATGCAGTTTAAAGCAGTTATAAAGGAGTCAAAGT
TTAATCTCATCAAGGAGTATTATTTCTTTAAAGCTTAAAGTTGGCTAGTT
TTTACCCTGCAATTTTCTAGTCCAGAAGCTGGAGCTTTTTTTATAAGCAT
AACGTTTATAAGCATACTGAAGCTCAAATTTCCAGAAAAATTAAGCATAT
GCTAAGCATACCTTGAGGCTCAGCCAAAGAAATTTTTAGTATCATAATTT
CCCAAACTTCAGAAAATAACAGAAGAATGAAGAAGAGAATTACAAACAAA
ATTCGAAAAATTGGTGATTTTATTTTGTTTAATCTCTTATAAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCATAATGCTGCAGGAGTCACGTTTCACGCGTCTTCGTCGTTG
ATGTTCAAGTATTATGCGAAATTTTCGACTTTAAGTCGTCTTGTTTACTT
TGATAAAAAGTGAATAGAAATGTCAGTAAAAGTAGTAAAATGTAAACATT
GCGCGAACCACGTGTCATAAAAGAGAACAATTAAAATCACGTGTCCAAAA
CAAACTTGTAAAACAATTGACCAATCAAAATTAGCCATATTTAGTTTGAT
TTTTTATTTTGACATGTGACATTTGTTTTGATTTTGTATCCGCTGCATAC
AGTTTGTTTACATATTTCGCAAGTACTGTTATGTCCCTTTAATGTACAAA
AAAAGGAAACAAGACGACTTGAAGTCGGAAATTTCAACAAATATTTGCAA
AAAAGTATGCTGAAATGCCGGCTTTTANGCTTGTTTACTTTGATAAAAAG
TGAATAGAAATGTCAGTAAATGTCATGCAAGTAAATCCTCTCCTTAAACA
AGACGACTTGAAGTCGGAAATTTCACCAAATATTTGCAAAAAGTATGCTA
AAATGCCAGCTTTGCCGATTCTATTTTATTTATAAAAGCTGAATTATGCT
TCAGGCGCCTTTGCTTAGTTCTTCAATTAAAACATATGAATAATTAAGGA
AAATTCCGTCAAACATAAATTTAGGAATGAATAAATTAAAATTCTTAGTG
AATTCAATTTCGGTTAGTTCAAAATAAATTATTATAAATTATTAACAATT
TCGGTTAGTTCAAAATAAATCATTAAAAATTTTGAACTAAAAAAAAGGGA
GAAAAAAAGTAGCATAGTAACATAAACAATATCATCGTTCAAGCGCCCTA
AGTTAAACGCTTAGACATTAAAATACCNGTTAGTTCAAAATAAATCATTA
AATATTTTGAACTAAAAAAAAGGGAGAAAAAAAGTAGCATAGTAACATAA
ACAATATCATCGTTCAAGCGCCCTAAGTTAAACGCTTAGACATTAAACTA
CGTTTTCAGCAATGCATTTTTTGGTAGCATTTTGTTTTTTATTTGGAATT
TCATCCACAGTTACACAGAGATGTAAAAGACAGGTTTGTATCATATAATT
TTCAGAATGTTTTTCAAACGGCACAGGATTTGCTTTCTTTATTAGAACAA
AAACCTTCAGAGCTTTAGCGTGTCGGATGAAAATTTCACCATCTGGCTGG
CACACATAAGGCACTATTGTGAGACAATATTTTCACGATGTTGTGCCTTT
CCCAGCCAAATCATACATAATGGTTGTGTTGAAATACGCATTAATAATGC
TTCTTCTTTCATTTATTCGACATTTTTGAGTTTTGTTTTTAAAAATATTT
CGCAGATAACCCAGCTGCCACACAACGTTGTTTCAACGTCAATTTAATGT
TCACAACGTCCATTTAACCTTACATGAACGTTGAAACAACGTTTTGTGTC
AGTTGGGAAGACCTTTCCAAATTTCCATATTGACAATAATTTCGCGTAAG
AATTCAAATCCGCAAAATCCGTCAAGTTTTATTCCAGGATTAGAGAAAAT
GATTGCCAGTGATAACTCTTTCCATACCGCACCAGCTAATTTTATGCCTT
GAAATACATTTTTTAGTCGCCGTAGATTTATTTGAGGACCTTATTCAAAA
AAGTGGCATGCTGAAGAGATAGCTTTTGAAACGAGTTTTCTAACGAACCG
GAAAATGAACTAAATTACTTTCGTCAAAGCCAAGACAATTCACTTCAAAG
TTTGCGATTTCAAAAAAATTGTTTTTTGATTTTTCGGGTATTAAAGAAGT
TAAAGAAAATCTTATCTTTATTTTCTTTTTAAATACAGGTTCCCGAGAAC
AGACATGGAATTCAACCAATAGTCATCACCAACAAAGGTAACATAAAAAG
AATCACAAATCCTTGCTGGTCGAGCGTAAACTTATAAAGTCCATTCGTGA
AATTTTTTCCGCACAAAGCATTGTGGGGAATTCTCGGAGGTCAAATCTGA
GTTTTTATATATAGCCGATATCGTCTATTGCAAAATTTTCAGACATTTCA
GTCATTTCAATACTCCAATTTCAAATGAATCAATCTAGAGCGTAAAAAAA
AAATCTAATCTATTTTAGCTGAAGCTGTTCAACAAAATAATCTCAAAAAG
ACATTACCCATTTTATCACCGGAATGGGAGGTCGAATTGAACCTGACAAT
GAATGCAAATCATGTAAACACTGGAATACCAGGAGGGGATTGGTGTTCAG
TATTCCATATGACAAAAGGCGATGAACTAGGCTCTCATGGCGATCGTACA
CCGGCAATATATCATTATAAGGTTGATGGGAAAATATGGCTTTTTTCATC
TGTAGGGAATGATTTCGATCATAGCTTCAATCGTCTTATCGAGTTCAATA
ACCAGTACCATATAAAGATCAGCCAAAGATATAAAAACGGAGGTGTTTAC
GAGTATTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTGGATAATCT
AAAAGCACGACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGA
AGACACCGTGTGTTGCAACGATAAGCTATATGAATATCGTGAATTTCCTG
TAGATTTTGATCAGAGAATTTTCACGATAGCGTGACAGTACTGACTTCAA
AGGAAAATATTTTTGCGTCAAAAAATTATAGGGTTGCTTGTCATTCTCCA
TTAGGGGCCACCTTTTCTTCTTTATAAGAGGTACTTTACGTGTGTGTCTA
CAAATTGCCTTCGTATCTGGCAAAAACATTTTGGCATACAAGTATGGAAA
ATCTTTTAAATTTTTGAGCTTTCACTGTCTGTTTATCGATAATCAAAAAT
TGTACGTCTTTCTAAGAAAACCATAATATCATAATTTAGCACTTCGTTTG
TTAAACCGTCGAGCGTCTAGAACTCGAATCTGCGCGAGGAACACAAATTT
GTTCGAGTTAAGGAATTTTCGAGTTATGGAATAAGATTTAAGGCAAATTG
TTATTTGAAGCGACGAGTAAACTTGTTCGAGTTAACGAGAAATTAGAGTT
AAAGTCTCTACCGTACTATAATTTTGCACTTGTTCGTTTGTCGATAAAGG
TTCAATTTCGCTGTACTCTAGCTGAACTTTTTAAAGGTGTGTATTTTACG
GATCGGAATATAAAAAAAAGCTGAAGGGATATTTAATATTTGACTAGGTT
GTGAACATATCGTACTAAGGGTTTCGAAAACGGTCGTTGAATGATTGAAA
ACCTATCATTTTTTTGACGAACATATAATGCAAAAGCAGCCGAGATTTTT
TAGAAATATGTGTTCTTATCTTAAGAGACCAAATGTTATGACCATTAACC
ATTAAATTTTCCATACAAATTATGTGTTCTGATTTCTATCGCCCTATTTG
TCTCCCTAAACTTATCATTACTTTATGGTTTGATGTGCTCTAAAATCTAG
GAAAAACAGTTTGCCAAGATAAACTTGTAATATATTTGTTTTGCTCCACG
AAAGATGTGTTATGAAAATTTACTAGGCAACAAGATTACATAAATTTTCT
CTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033652XLOC_033652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053327-exon-scaffold_228-1575043694:293434..293631TCONS_00053327-exon-scaffold_228-1575043694:293434..293631Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1575043694:292018..292066TCONS_00053327-exon-scaffold_228-1575043694:292018..292066Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1575043694:280479..281913TCONS_00053327-exon-scaffold_228-1575043694:280479..281913Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1510915933:293434..293631TCONS_00053327-exon-scaffold_228-1510915933:293434..293631Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1510915933:292018..292066TCONS_00053327-exon-scaffold_228-1510915933:292018..292066Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1510915933:280479..281913TCONS_00053327-exon-scaffold_228-1510915933:280479..281913Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1491911889:293434..293631TCONS_00053327-exon-scaffold_228-1491911889:293434..293631Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1491911889:292018..292066TCONS_00053327-exon-scaffold_228-1491911889:292018..292066Clytia hemisphaericaexon
TCONS_00053327-exon-scaffold_228-1491911889:280479..281913TCONS_00053327-exon-scaffold_228-1491911889:280479..281913Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:280479..293631 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.21247	2.07448	1.36095	1.01261	0	0	0	0	0	0	0	0	0	0.0021793	0	0.0724002	0	0	1.30541	0	0	0	1.64993	0.802991	0.708792	0.836049	0.179295	0	0	0.255363
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053327 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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