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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053333 ID=TCONS_00053333|Name=TCONS_00053333|organism=Clytia hemisphaerica|type=transcript|length=1588bp GATaagaatcaataaaaaacaaattaaaaaataatgatatgAATGGTATT AACGATGAAGATGTTAACGCCAGAGACGAGGGTGGTGATGGCGGTGGTTG TGGCAGCGGTGGCGGTATTTTTGTTGATTCACCTTTAATTATAGATGTTG TTAACCATCATGCAGCTGACGACACCCATTCCATTGATaGTGAAAAAGCG CGAATGATTTCTGAGGAGATTGGTGATGAATCACGTGTTATGAAAAACAT TCTGAACGATTACCAAGGACGATTCTCAATTTTTCGTGACGGTATTCTAA AGTTGAAACATTATTATGATAcgCAAATGGTGTTAATCAAATCACACTTC CACAAGACGAATAGCGATGAAAGCTATCAAACTTCCCCGTCTTCAAAAGA TTTCTTTATCGGTAAAATTGTTCAAATCATGGAGTTAGCCCTCAAACAGA TCTTATCCTTGATGGACGCCAGCGATATGACAAGATCGTTTGCAGATGAG ACGATTGACGTCTTGGATCAGGACGTGGAAGGAGATATTGAAGTGACTGA ACCAAAAATTACTAAGaaattttctgtTGATGAGGAATCGCGTCAGGGAT CATCAACTCAACTTTTCCCACCAATGATAAGTGCAGATGACAACACCCAG CAAGTCGCAAGCCAACAGCATCCCATCGGATTCCCAAACGCTAGTTGCAG CATACTATCTCCACAATTCGATATACCTTACGACACTGGTCAAGAAGATA ATACAAACCAGCAGACCGTCGAACCTCAGCCACAAACGGTATCAAACTCT GAAGTTATCCCACCTCGATTGCCTTCAAATTCTGAAGTTATACCACCTCG ATTGCCTTCAAACTCTGAACTTATGCCACCGCTTCAAATAGGTGCAAGCT CAGCATCAACTTCCCAACAACATCATTTTGATTCGAAAAACCCAAAAAGT AACGACGTCGCAGACTCGAATAGATATAATCCAATTATCCTTCAAGATGG TAGAAATAACTCCATAGCAACGGCTAATAATGATTACTTAGAATCCAATA TGGCGGATTTTGGACTACTTCCTCCAGGGACTGGGGAACAGTTTGTCTGT CCGTATTGTAAGTTTACCTTTACCACAAAACGAGACATGGATCGACATTT GAGATCACATACCGGTGAAAAACCTTTTCATTGCGAGGTCTGCTCGAAAT ATTTTGCTCGTAAAGACTTTTTGACGAAACATAAATTAACACATACTGGT GAAAAACCTTATTCGTGTGAACAATGCAATAAACGGTTTAGCCAacgatc aaatttgaataaacaCCTGCTCACACATACTAAGGAACATAAACACATTT GTAAGATCTGTCAACGTGGTTTTCATCAGATGATTAATTTGCATCGCCAT GAACAGATCCATTGCAATGTGTCCAAACAATTTCAATGTGTTTGGTGTAC CAAGATGGCTTACCAAGGTCCTGATTGTTTTAAAACCTTCCTCGATAAAC GTGAAGCTGCTAATGGCTGATTGGATTCATTGCGAATAAGTTTTGTTTGG TTTGCgagacaatttttcaaaaataattttattttcgc Run BLAST on NCBI protein sequence of TCONS_00053333-protein >TCONS_00053333-protein ID=TCONS_00053333-protein|Name=TCONS_00053333-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
MNGINDEDVNARDEGGDGGGCGSGGGIFVDSPLIIDVVNHHAADDTHSID SEKARMISEEIGDESRVMKNILNDYQGRFSIFRDGILKLKHYYDTQMVLI KSHFHKTNSDESYQTSPSSKDFFIGKIVQIMELALKQILSLMDASDMTRS FADETIDVLDQDVEGDIEVTEPKITKKFSVDEESRQGSSTQLFPPMISAD DNTQQVASQQHPIGFPNASCSILSPQFDIPYDTGQEDNTNQQTVEPQPQT VSNSEVIPPRLPSNSEVIPPRLPSNSELMPPLQIGASSASTSQQHHFDSK NPKSNDVADSNRYNPIILQDGRNNSIATANNDYLESNMADFGLLPPGTGE QFVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKL THTGEKPYSCEQCNKRFSQRSNLNKHLLTHTKEHKHICKICQRGFHQMIN LHRHEQIHCNVSKQFQCVWCTKMAYQGPDCFKTFLDKREAANG Run BLAST on NCBI transcript from alignment at scaffold_228:466014..472731- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053333 ID=TCONS_00053333|Name=TCONS_00053333|organism=Clytia hemisphaerica|type=transcript|length=6718bp|location=Sequence derived from alignment at scaffold_228:466014..472731- (Clytia hemisphaerica) GATAAGAATCAATAAAAAACAAATTAAAAAATAATGATATGAATGGTATT
AACGATGAAGATGTTAACGCCAGAGACGAGGGTGGTGATGGCGGTGGTTG
TGGCAGCGGTGGCGGTATTTTTGTTGATTCACCTTTAATTATAGATGTTG
TTAACCATCATGCAGCTGACGACACCCATTCCATTGATGTTAGTTTTTTT
TCGATAAACGATACTGAACAAGTGTATTTTGACACTTTGTCGTCTGATCT
CATTTTTTCAAAATCTGTACGTTTACACCCCCTTCTCACAGATCCGGTAG
GATATTTCCTCAACCAGTTGGGGTGAAAATAACGGACTGAAACTCCATAG
GGATTGATATTCCAATATTTCTTATGGCTGAGGATTTCTTTTGTTTTTAA
AGCTGAAAATTCAGTGGTGATGGGAGAAATAGCATTATACTTTTGCAGTG
ATGATTGGTTTATTTGATTATTTTCAGTGGGGACAAAAATTGAAATATAA
TTTTCCGGGGACGATATTTCGGCCAATTTTTCCAGTGGCAAGGGTTCCCA
GTGGTCATGTAAGAACGGGGTGTACGTTTGAGTTGCTCTTAAGACTTGAC
TTCGTTGCTTTATACTGTATTAGTATTATATAAGTTTCTCTGCACATACA
CGTTTTTTGGACCTACCCCGGTGGGCTGTAGGTCCTATAAATTAACCTCT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGCATTTTCGCTAAACGATATATTTTCTGACTGATTTTTTTCTCCT
CGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGC
TTGTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCTA
AAAACTAAGAAACATCTCAGAAACATGCTGAGGCTGAGAATGAGAAAATA
ACTATTTTAATTCAGTTTTTCTTAAGAACCTTCCAATTCAGCCTTCAATG
AGGCTGATTATGTCAAAAAGTTTAGAAACATGTAAGAAACATTTAAGGCT
CAAAAGGCCGATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTT
TCTTAAAAAAAAAACAACGTGTATTCAAGACGGTAAGGAATAATGTGAAC
CTCAGATTTCAGAATGTTACTATACTAGTACTTAAAGTGAGAATTTGGAA
ATCTTAAGTTCAGCTTATATATCATCTTGAATATGCAAAACATTCTTTAG
CAAATAGTTCTTTACACCAAAAGTAAATTATTTTATTTCAATTGAGATTT
TTCATTTGTTTAGAGTGAAAAAGCGCGAATGATTTCTGAGGAGATTGGTG
ATGAATCACGTGTTATGAAAAACATTCTGAACGATTACCAAGGACGATTC
TCAATTTTTCGTGACGGTATTCTAAAGTTGAAACATTATTATGATACGGT
AAATAAAAAACAACTTCAGGAATCATTTTCCTCGCACGCATTCATATCTT
ATAGGCCATCATTCGCATTATTTTTCATTTTTTAAGGCCCGTTTAAAAGG
GTCAATCAGCGGTTTTATGAATTTCTTTACATTTAACATTTATAAAGGGT
CTATTTGTTTCACTTTTTATAAATGCTATAGATGTTATCTGCTAAAATTG
CTACAAAACTCCATGAAAACTTTCAAAATGATAGTAAATATTGCAGGTTT
TGTTGTCTGTCATCTTTAAGATCCTTGGTTGTGCTTTAAATTTTGAAAAT
TCACTTTCAATCCATTGTTTATTCATGGCTGTGTGGCTACACTATCCCAC
CATTATGAAAATAACTGCTATTTTGGTTTCAGATATAAACCCGTGCGTGG
AACAAGCTACAGTTTAACCTCTTCACTTCTCTAATTTTATTGGTTTAAAA
TCGGTATTCTGGCTAAGAAAACATCATTCAGTCTCACTTTAGATGCAATT
TTTACTATGGAGAAATTATAAACTTTGTTTTCCTTGCAGAAGTTTGAGGT
CTGTTGAGGTTTTTACTGCTTTTGCTGGTTGGGCGTTCGCAAGTTTATTT
ACAAAAAGTGCTACAGTTCTGGATAGAAAAAATCGAAATGAGTGCATTTA
TAGTAAATATAGCAAAAATAGCGATGAAACAAATAGGCCCAAAGAGAACC
TTGACTTGTAAGAACGGTTGTTATGGCTGCTAATCGAATATGATTACTTA
CCGGTATTATTCAAATTTCTGATGTTGATTATTTTCTACCAGTGTTGGAG
TGCAAGTCGTGATACTAGGCTCATTCTTCCTGATGGGAAAGACTGATTCC
AAGATACCAAAAAGAATAATATCTAGCGAGTGTTCTTTTGTCTTAGTGAA
GTATATAAAGAGGCTTTATCGTCTCAAAATCATAATTCACCAAAATTTCA
AAAATATGTAAAATACATTTTCCGTGTCCGAGGGAAAGCCTATTTTGACC
ACTATTTATCTACTTCCATTCATAGCAAATGGTGTTAATCAAATCACACT
TCCACAAGACGAATAGCGATGAAAGCTATCAAACTTCCCCGTCTTCAAAA
GATTTCTTTATCGGTAAAATTGTTCAAATCATGGAGTTAGCCCTCAAACA
GATCTTATCCTTGATGGACGCCAGCGATATGACAAGATCGTTTGCAGATG
AGACGATTGACGTCTTGGATCAGGACGTGGAAGGAGATATTGAAGTGACT
GAACCAAAAATTACTAAGGTAAATGCCTATTTTCCAGCATCTTTTTCTCT
CAGGTTCCCACTAATTTCCATACGATTTTTAAGTAAGCTATTCTTCATTT
AACAAATCGTTATGATAAATATTGCGGCTCTCTTTGATCTTCTTGAAGAA
ACGGGCAACGTACTAAAATAACAGACAGTAAAGATGGCATTCATTAATCT
TTATCTATTATTCATAATTTTCCTTTTTTTTTAGAAATTTTCTGTTGATG
AGGAATCGCGTCAGGGATCATCAAGTTAGTGTTTGTTTTATCTGATGGCG
GATTTGCGTTCGCCCACGCTAAAGCTCGAAAGGAGCGGGCCAATTTCCGA
TCGGAGAGGAATGATAGTCGGCCTTTGATGTGCCGCATCCCCATTCGGGT
TCAACTACCCTTGCACGTGAAGCTAAAAGTTTTTCGGTTGGACGTCCGCC
AATCGCCGAAAACGAGGGCTGGGTTGCCAGACCTCCCGCTGCAAAATCCT
TGACGTGGTCTCGCAAAATTCCGTAATCAAACCTTCTAGATGTTGAAAAT
TTTTCCGACCTTCAGAGTTTTAGCATGTCGGATGAAAATTTCTGTTCCTG
GGTGCCAGATAAGTGTTCGTTTCTTCACTATAAAAGGGGCTTTCTCAACG
TGGAGCTTTGGGTATAGAAATCTGATAAGGTCTAATATCAAATCGAATTT
TGAATCTTACTAATGTGATTTAGGATTGTGAAGTATTGTGTAGAATTTTC
ATCGACTAGCTTAACTTATGTATCGTTTCTGCTAGCTCAACTTTTCCCAC
CAATGATAAGTGCAGATGACAACACCCAGCAAGTCGCAAGCCAACAGCAT
CCCATCGGATTCCCAAACGCTAGTTGCAGCATACTATCTCCACAATTCGA
TATACCTTACGACACTGGTCAAGAAGATAATACAAACCAGCAGACCGTCG
AACCTCAGCCACAAACGGTATCAAACTCTGAAGTTATCCCACCTCGATTG
CCTTCAAATTCTGAAGTTATACCACCTCGATTGCCTTCAAACTCTGAACT
TATGCCACCGCTTCAAATAGGTGCAAGCTCAGCATCAACTTCCCAACAAC
ATCATTTTGATTCGAAAAACCCAAAAAGTAACGACGTCGCAGACTCGAAT
AGATATAATCCAATTATCCTTCAAGATGGTAGAAATAACTCCATAGCAAC
GGCTAATAATGATTACTTAGAATCCAATATGGCGGATTTTGGACTACTTC
CTCCAGGGACTGGGGAACAGTTTGTCTGTCCGTATTGTAAGTTTACCTTT
ACCACAAAACGAGACATGGATCGACATTTGAGATCACATACCGGTGAAAA
ACCTTTTCATTGCGAGGTCAGTAGAATTTTTCAGGTTTTGTTTAAGTTGG
ATGGCGATCCCTTACGCAAACTAAAAGTTTGCTTCCATGATAACGGAAGT
TACGTGTTCTTACGTTAAGATCCTTTTTGTCAACAATATTTTCCTAATGT
GCTGTAACTTAAAAAGACTTTAAAATACAATCTTTTTTATAATGTTAATA
ACTATAATTTTTGAAAATCACCAAAGTAATATCTTAGCCTAGAACAGCTC
AATTTCAAGAGAAATAAGGGTCATATTGTTAGAAAAAATGTCGTCGTTTT
GCATAAGATTCCCTTTCCAGCACTAAGATTCCACTGCCACTTTTCTATCT
CAGAAAAAGACCAGTTGAAGAATGTTTCGAATGTTTTCGTAAATAAACCC
AAGATTTTCCGTAACTTTAGAAGAAAACCCTTTCCAATCTCATGCTGGCT
CTCCCGGAAAAATAACAGAAAAACCCCGGAAAAGTTAGGAGAATTTTAGT
GTGAGGAAGGGAATCTTAGAAAATCTCCTTTACGACTTGTTCATGAACCA
CTTTCCAATGAAAAAGAATTTTCGAAAAATATCGTACTATAATGGACAAA
GTCAGCCTGAAACCCTAAAAATAAGAACTTGCGGATTATAACAATTTGAG
GATCAAAGTGCTGAAAAATATATAAAGATATTCTTGTTTCTTCTTTAGGT
CTGCTCGAAATATTTTGCTCGTAAAGACTTTTTGACGAAACATAAATTAA
CACATACTGGTGAAAAACCTTATTCGTGTGAACAATGCAATAAACGGTTT
AGCCAACGATCAAATTTGAATAAACACCTGCTCACACATACTAAGGTAAA
ATGTTCTGAAAATGGTTTTATCGGTCTCTAGGGCTAAGTCTTCAAAATAA
ACTGGGAGGATAAAACATTACCTAGAATTTGATAAACAGTAAATGAGTAA
TTGCCCGTTTATAAGGCTATTTACGGCGACAAAATGAAAGTTGACATTCC
GATGATTTTTTTGCATATTTTTAAGTAATGTGATACGTATCCTTGGATTT
TGAAAATTAAATTTTGGTCACTCAAAAATATTCTTTTTCAGGACCACAAA
CACATTTGTAAGATCTNGGATTTTGAAAATTAAATTTTGGTCACTCAAAA
ATATTCTTTTTCAGGAACATAAACACATTTGTAAGATCTGTCAACGTGGT
TTTCATCAGATGATTAATTTGCATCGCCATGAACAGATCCATTGCAATGT
GTCCAAACAATTTCAATGTGTTTGGTGTACCAAGATGGCTTACCAAGGTC
CTGATTGTTTTAAAACCTTCCTCGATAAACGTGAAGCTGCTAATGGCTGA
TTGGATTCATTGCGAATAAGTTTTGTTTGGTTTGCGAGACAATTTTTCAA
AAATAATTTTATTTTCGC Coding sequence (CDS) from alignment at scaffold_228:466014..472731- >TCONS_00053333 ID=TCONS_00053333|Name=TCONS_00053333|organism=Clytia hemisphaerica|type=CDS|length=10374bp|location=Sequence derived from alignment at scaffold_228:466014..472731- (Clytia hemisphaerica) GAACATAAACACATTTGTAAGATCTGTCAACGTGGTTTTCATCAGATGAT TAATTTGCATCGCCATGAACAGATCCATTGCAATGTGTCCAAACAATTTC AATGTGTTTGGTGTACCAAGATGGCTTACCAAGGTCCTGATTGTTTTAAA ACCTTCCTCGATAAACGTGAAGCTGCTAATGGCTGAGTCTGCTCGAAATA TTTTGCTCGTAAAGACTTTTTGACGAAACATAAATTAACACATACTGGTG AAAAACCTTATTCGTGTGAACAATGCAATAAACGGTTTAGCCAACGATCA AATTTGAATAAACACCTGCTCACACATACTAAGCTCAACTTTTCCCACCA ATGATAAGTGCAGATGACAACACCCAGCAAGTCGCAAGCCAACAGCATCC CATCGGATTCCCAAACGCTAGTTGCAGCATACTATCTCCACAATTCGATA TACCTTACGACACTGGTCAAGAAGATAATACAAACCAGCAGACCGTCGAA CCTCAGCCACAAACGGTATCAAACTCTGAAGTTATCCCACCTCGATTGCC TTCAAATTCTGAAGTTATACCACCTCGATTGCCTTCAAACTCTGAACTTA TGCCACCGCTTCAAATAGGTGCAAGCTCAGCATCAACTTCCCAACAACAT CATTTTGATTCGAAAAACCCAAAAAGTAACGACGTCGCAGACTCGAATAG ATATAATCCAATTATCCTTCAAGATGGTAGAAATAACTCCATAGCAACGG CTAATAATGATTACTTAGAATCCAATATGGCGGATTTTGGACTACTTCCT CCAGGGACTGGGGAACAGTTTGTCTGTCCGTATTGTAAGTTTACCTTTAC CACAAAACGAGACATGGATCGACATTTGAGATCACATACCGGTGAAAAAC CTTTTCATTGCGAGAAATTTTCTGTTGATGAGGAATCGCGTCAGGGATCA TCAACAAATGGTGTTAATCAAATCACACTTCCACAAGACGAATAGCGATG AAAGCTATCAAACTTCCCCGTCTTCAAAAGATTTCTTTATCGGTAAAATT GTTCAAATCATGGAGTTAGCCCTCAAACAGATCTTATCCTTGATGGACGC CAGCGATATGACAAGATCGTTTGCAGATGAGACGATTGACGTCTTGGATC AGGACGTGGAAGGAGATATTGAAGTGACTGAACCAAAAATTACTAAGAGT GAAAAAGCGCGAATGATTTCTGAGGAGATTGGTGATGAATCACGTGTTAT GAAAAACATTCTGAACGATTACCAAGGACGATTCTCAATTTTTCGTGACG GTATTCTAAAGTTGAAACATTATTATGATACGATGAATGGTATTAACGAT GAAGATGTTAACGCCAGAGACGAGGGTGGTGATGGCGGTGGTTGTGGCAG CGGTGGCGGTATTTTTGTTGATTCACCTTTAATTATAGATGTTGTTAACC ATCATGCAGCTGACGACACCCATTCCATTGATGAACATAAACACATTTGT AAGATCTGTCAACGTGGTTTTCATCAGATGATTAATTTGCATCGCCATGA ACAGATCCATTGCAATGTGTCCAAACAATTTCAATGTGTTTGGTGTACCA AGATGGCTTACCAAGGTCCTGATTGTTTTAAAACCTTCCTCGATAAACGT GAAGCTGCTAATGGCTGAGTCTGCTCGAAATATTTTGCTCGTAAAGACTT TTTGACGAAACATAAATTAACACATACTGGTGAAAAACCTTATTCGTGTG AACAATGCAATAAACGGTTTAGCCAACGATCAAATTTGAATAAACACCTG CTCACACATACTAAGCTCAACTTTTCCCACCAATGATAAGTGCAGATGAC AACACCCAGCAAGTCGCAAGCCAACAGCATCCCATCGGATTCCCAAACGC TAGTTGCAGCATACTATCTCCACAATTCGATATACCTTACGACACTGGTC AAGAAGATAATACAAACCAGCAGACCGTCGAACCTCAGCCACAAACGGTA TCAAACTCTGAAGTTATCCCACCTCGATTGCCTTCAAATTCTGAAGTTAT ACCACCTCGATTGCCTTCAAACTCTGAACTTATGCCACCGCTTCAAATAG GTGCAAGCTCAGCATCAACTTCCCAACAACATCATTTTGATTCGAAAAAC CCAAAAAGTAACGACGTCGCAGACTCGAATAGATATAATCCAATTATCCT TCAAGATGGTAGAAATAACTCCATAGCAACGGCTAATAATGATTACTTAG AATCCAATATGGCGGATTTTGGACTACTTCCTCCAGGGACTGGGGAACAG TTTGTCTGTCCGTATTGTAAGTTTACCTTTACCACAAAACGAGACATGGA TCGACATTTGAGATCACATACCGGTGAAAAACCTTTTCATTGCGAGAAAT TTTCTGTTGATGAGGAATCGCGTCAGGGATCATCAACAAATGGTGTTAAT CAAATCACACTTCCACAAGACGAATAGCGATGAAAGCTATCAAACTTCCC CGTCTTCAAAAGATTTCTTTATCGGTAAAATTGTTCAAATCATGGAGTTA GCCCTCAAACAGATCTTATCCTTGATGGACGCCAGCGATATGACAAGATC GTTTGCAGATGAGACGATTGACGTCTTGGATCAGGACGTGGAAGGAGATA TTGAAGTGACTGAACCAAAAATTACTAAGAGTGAAAAAGCGCGAATGATT TCTGAGGAGATTGGTGATGAATCACGTGTTATGAAAAACATTCTGAACGA TTACCAAGGACGATTCTCAATTTTTCGTGACGGTATTCTAAAGTTGAAAC ATTATTATGATACGATGAATGGTATTAACGATGAAGATGTTAACGCCAGA GACGAGGGTGGTGATGGCGGTGGTTGTGGCAGCGGTGGCGGTATTTTTGT TGATTCACCTTTAATTATAGATGTTGTTAACCATCATGCAGCTGACGACA CCCATTCCATTGATGAACATAAACACATTTGTAAGATCTGTCAACGTGGT TTTCATCAGATGATTAATTTGCATCGCCATGAACAGATCCATTGCAATGT GTCCAAACAATTTCAATGTGTTTGGTGTACCAAGATGGCTTACCAAGGTC CTGATTGTTTTAAAACCTTCCTCGATAAACGTGAAGCTGCTAATGGCTGA GTCTGCTCGAAATATTTTGCTCGTAAAGACTTTTTGACGAAACATAAATT AACACATACTGGTGAAAAACCTTATTCGTGTGAACAATGCAATAAACGGT TTAGCCAACGATCAAATTTGAATAAACACCTGCTCACACATACTAAGCTC AACTTTTCCCACCAATGATAAGTGCAGATGACAACACCCAGCAAGTCGCA AGCCAACAGCATCCCATCGGATTCCCAAACGCTAGTTGCAGCATACTATC TCCACAATTCGATATACCTTACGACACTGGTCAAGAAGATAATACAAACC AGCAGACCGTCGAACCTCAGCCACAAACGGTATCAAACTCTGAAGTTATC CCACCTCGATTGCCTTCAAATTCTGAAGTTATACCACCTCGATTGCCTTC AAACTCTGAACTTATGCCACCGCTTCAAATAGGTGCAAGCTCAGCATCAA CTTCCCAACAACATCATTTTGATTCGAAAAACCCAAAAAGTAACGACGTC GCAGACTCGAATAGATATAATCCAATTATCCTTCAAGATGGTAGAAATAA CTCCATAGCAACGGCTAATAATGATTACTTAGAATCCAATATGGCGGATT TTGGACTACTTCCTCCAGGGACTGGGGAACAGTTTGTCTGTCCGTATTGT AAGTTTACCTTTACCACAAAACGAGACATGGATCGACATTTGAGATCACA TACCGGTGAAAAACCTTTTCATTGCGAGAAATTTTCTGTTGATGAGGAAT CGCGTCAGGGATCATCAACAAATGGTGTTAATCAAATCACACTTCCACAA GACGAATAGCGATGAAAGCTATCAAACTTCCCCGTCTTCAAAAGATTTCT TTATCGGTAAAATTGTTCAAATCATGGAGTTAGCCCTCAAACAGATCTTA TCCTTGATGGACGCCAGCGATATGACAAGATCGTTTGCAGATGAGACGAT TGACGTCTTGGATCAGGACGTGGAAGGAGATATTGAAGTGACTGAACCAA AAATTACTAAGAGTGAAAAAGCGCGAATGATTTCTGAGGAGATTGGTGAT GAATCACGTGTTATGAAAAACATTCTGAACGATTACCAAGGACGATTCTC AATTTTTCGTGACGGTATTCTAAAGTTGAAACATTATTATGATACGATGA ATGGTATTAACGATGAAGATGTTAACGCCAGAGACGAGGGTGGTGATGGC GGTGGTTGTGGCAGCGGTGGCGGTATTTTTGTTGATTCACCTTTAATTAT AGATGTTGTTAACCATCATGCAGCTGACGACACCCATTCCATTGATGAAC ATAAACACATTTGTAAGATCTGTCAACGTGGTTTTCATCAGATGATTAAT TTGCATCGCCATGAACAGATCCATTGCAATGTGTCCAAACAATTTCAATG TGTTTGGTGTACCAAGATGGCTTACCAAGGTCCTGATTGTTTTAAAACCT TCCTCGATAAACGTGAAGCTGCTAATGGCTGAGTCTGCTCGAAATATTTT GCTCGTAAAGACTTTTTGACGAAACATAAATTAACACATACTGGTGAAAA ACCTTATTCGTGTGAACAATGCAATAAACGGTTTAGCCAACGATCAAATT TGAATAAACACCTGCTCACACATACTAAGCTCAACTTTTCCCACCAATGA TAAGTGCAGATGACAACACCCAGCAAGTCGCAAGCCAACAGCATCCCATC GGATTCCCAAACGCTAGTTGCAGCATACTATCTCCACAATTCGATATACC TTACGACACTGGTCAAGAAGATAATACAAACCAGCAGACCGTCGAACCTC AGCCACAAACGGTATCAAACTCTGAAGTTATCCCACCTCGATTGCCTTCA AATTCTGAAGTTATACCACCTCGATTGCCTTCAAACTCTGAACTTATGCC ACCGCTTCAAATAGGTGCAAGCTCAGCATCAACTTCCCAACAACATCATT TTGATTCGAAAAACCCAAAAAGTAACGACGTCGCAGACTCGAATAGATAT AATCCAATTATCCTTCAAGATGGTAGAAATAACTCCATAGCAACGGCTAA TAATGATTACTTAGAATCCAATATGGCGGATTTTGGACTACTTCCTCCAG GGACTGGGGAACAGTTTGTCTGTCCGTATTGTAAGTTTACCTTTACCACA AAACGAGACATGGATCGACATTTGAGATCACATACCGGTGAAAAACCTTT TCATTGCGAGAAATTTTCTGTTGATGAGGAATCGCGTCAGGGATCATCAA CAAATGGTGTTAATCAAATCACACTTCCACAAGACGAATAGCGATGAAAG CTATCAAACTTCCCCGTCTTCAAAAGATTTCTTTATCGGTAAAATTGTTC AAATCATGGAGTTAGCCCTCAAACAGATCTTATCCTTGATGGACGCCAGC GATATGACAAGATCGTTTGCAGATGAGACGATTGACGTCTTGGATCAGGA CGTGGAAGGAGATATTGAAGTGACTGAACCAAAAATTACTAAGAGTGAAA AAGCGCGAATGATTTCTGAGGAGATTGGTGATGAATCACGTGTTATGAAA AACATTCTGAACGATTACCAAGGACGATTCTCAATTTTTCGTGACGGTAT TCTAAAGTTGAAACATTATTATGATACGATGAATGGTATTAACGATGAAG ATGTTAACGCCAGAGACGAGGGTGGTGATGGCGGTGGTTGTGGCAGCGGT GGCGGTATTTTTGTTGATTCACCTTTAATTATAGATGTTGTTAACCATCA TGCAGCTGACGACACCCATTCCATTGATGAACATAAACACATTTGTAAGA TCTGTCAACGTGGTTTTCATCAGATGATTAATTTGCATCGCCATGAACAG ATCCATTGCAATGTGTCCAAACAATTTCAATGTGTTTGGTGTACCAAGAT GGCTTACCAAGGTCCTGATTGTTTTAAAACCTTCCTCGATAAACGTGAAG CTGCTAATGGCTGAGTCTGCTCGAAATATTTTGCTCGTAAAGACTTTTTG ACGAAACATAAATTAACACATACTGGTGAAAAACCTTATTCGTGTGAACA ATGCAATAAACGGTTTAGCCAACGATCAAATTTGAATAAACACCTGCTCA CACATACTAAGCTCAACTTTTCCCACCAATGATAAGTGCAGATGACAACA CCCAGCAAGTCGCAAGCCAACAGCATCCCATCGGATTCCCAAACGCTAGT TGCAGCATACTATCTCCACAATTCGATATACCTTACGACACTGGTCAAGA AGATAATACAAACCAGCAGACCGTCGAACCTCAGCCACAAACGGTATCAA ACTCTGAAGTTATCCCACCTCGATTGCCTTCAAATTCTGAAGTTATACCA CCTCGATTGCCTTCAAACTCTGAACTTATGCCACCGCTTCAAATAGGTGC AAGCTCAGCATCAACTTCCCAACAACATCATTTTGATTCGAAAAACCCAA AAAGTAACGACGTCGCAGACTCGAATAGATATAATCCAATTATCCTTCAA GATGGTAGAAATAACTCCATAGCAACGGCTAATAATGATTACTTAGAATC CAATATGGCGGATTTTGGACTACTTCCTCCAGGGACTGGGGAACAGTTTG TCTGTCCGTATTGTAAGTTTACCTTTACCACAAAACGAGACATGGATCGA CATTTGAGATCACATACCGGTGAAAAACCTTTTCATTGCGAGAAATTTTC TGTTGATGAGGAATCGCGTCAGGGATCATCAACAAATGGTGTTAATCAAA TCACACTTCCACAAGACGAATAGCGATGAAAGCTATCAAACTTCCCCGTC TTCAAAAGATTTCTTTATCGGTAAAATTGTTCAAATCATGGAGTTAGCCC TCAAACAGATCTTATCCTTGATGGACGCCAGCGATATGACAAGATCGTTT GCAGATGAGACGATTGACGTCTTGGATCAGGACGTGGAAGGAGATATTGA AGTGACTGAACCAAAAATTACTAAGAGTGAAAAAGCGCGAATGATTTCTG AGGAGATTGGTGATGAATCACGTGTTATGAAAAACATTCTGAACGATTAC CAAGGACGATTCTCAATTTTTCGTGACGGTATTCTAAAGTTGAAACATTA TTATGATACGATGAATGGTATTAACGATGAAGATGTTAACGCCAGAGACG AGGGTGGTGATGGCGGTGGTTGTGGCAGCGGTGGCGGTATTTTTGTTGAT TCACCTTTAATTATAGATGTTGTTAACCATCATGCAGCTGACGACACCCA TTCCATTGATGAACATAAACACATTTGTAAGATCTGTCAACGTGGTTTTC ATCAGATGATTAATTTGCATCGCCATGAACAGATCCATTGCAATGTGTCC AAACAATTTCAATGTGTTTGGTGTACCAAGATGGCTTACCAAGGTCCTGA TTGTTTTAAAACCTTCCTCGATAAACGTGAAGCTGCTAATGGCTGAGTCT GCTCGAAATATTTTGCTCGTAAAGACTTTTTGACGAAACATAAATTAACA CATACTGGTGAAAAACCTTATTCGTGTGAACAATGCAATAAACGGTTTAG CCAACGATCAAATTTGAATAAACACCTGCTCACACATACTAAGCTCAACT TTTCCCACCAATGATAAGTGCAGATGACAACACCCAGCAAGTCGCAAGCC AACAGCATCCCATCGGATTCCCAAACGCTAGTTGCAGCATACTATCTCCA CAATTCGATATACCTTACGACACTGGTCAAGAAGATAATACAAACCAGCA GACCGTCGAACCTCAGCCACAAACGGTATCAAACTCTGAAGTTATCCCAC CTCGATTGCCTTCAAATTCTGAAGTTATACCACCTCGATTGCCTTCAAAC TCTGAACTTATGCCACCGCTTCAAATAGGTGCAAGCTCAGCATCAACTTC CCAACAACATCATTTTGATTCGAAAAACCCAAAAAGTAACGACGTCGCAG ACTCGAATAGATATAATCCAATTATCCTTCAAGATGGTAGAAATAACTCC ATAGCAACGGCTAATAATGATTACTTAGAATCCAATATGGCGGATTTTGG ACTACTTCCTCCAGGGACTGGGGAACAGTTTGTCTGTCCGTATTGTAAGT TTACCTTTACCACAAAACGAGACATGGATCGACATTTGAGATCACATACC GGTGAAAAACCTTTTCATTGCGAGAAATTTTCTGTTGATGAGGAATCGCG TCAGGGATCATCAACAAATGGTGTTAATCAAATCACACTTCCACAAGACG AATAGCGATGAAAGCTATCAAACTTCCCCGTCTTCAAAAGATTTCTTTAT CGGTAAAATTGTTCAAATCATGGAGTTAGCCCTCAAACAGATCTTATCCT TGATGGACGCCAGCGATATGACAAGATCGTTTGCAGATGAGACGATTGAC GTCTTGGATCAGGACGTGGAAGGAGATATTGAAGTGACTGAACCAAAAAT TACTAAGAGTGAAAAAGCGCGAATGATTTCTGAGGAGATTGGTGATGAAT CACGTGTTATGAAAAACATTCTGAACGATTACCAAGGACGATTCTCAATT TTTCGTGACGGTATTCTAAAGTTGAAACATTATTATGATACGATGAATGG TATTAACGATGAAGATGTTAACGCCAGAGACGAGGGTGGTGATGGCGGTG GTTGTGGCAGCGGTGGCGGTATTTTTGTTGATTCACCTTTAATTATAGAT GTTGTTAACCATCATGCAGCTGACGACACCCATTCCATTGATGAACATAA ACACATTTGTAAGATCTGTCAACGTGGTTTTCATCAGATGATTAATTTGC ATCGCCATGAACAGATCCATTGCAATGTGTCCAAACAATTTCAATGTGTT TGGTGTACCAAGATGGCTTACCAAGGTCCTGATTGTTTTAAAACCTTCCT CGATAAACGTGAAGCTGCTAATGGCTGAGTCTGCTCGAAATATTTTGCTC GTAAAGACTTTTTGACGAAACATAAATTAACACATACTGGTGAAAAACCT TATTCGTGTGAACAATGCAATAAACGGTTTAGCCAACGATCAAATTTGAA TAAACACCTGCTCACACATACTAAGCTCAACTTTTCCCACCAATGATAAG TGCAGATGACAACACCCAGCAAGTCGCAAGCCAACAGCATCCCATCGGAT TCCCAAACGCTAGTTGCAGCATACTATCTCCACAATTCGATATACCTTAC GACACTGGTCAAGAAGATAATACAAACCAGCAGACCGTCGAACCTCAGCC ACAAACGGTATCAAACTCTGAAGTTATCCCACCTCGATTGCCTTCAAATT CTGAAGTTATACCACCTCGATTGCCTTCAAACTCTGAACTTATGCCACCG CTTCAAATAGGTGCAAGCTCAGCATCAACTTCCCAACAACATCATTTTGA TTCGAAAAACCCAAAAAGTAACGACGTCGCAGACTCGAATAGATATAATC CAATTATCCTTCAAGATGGTAGAAATAACTCCATAGCAACGGCTAATAAT GATTACTTAGAATCCAATATGGCGGATTTTGGACTACTTCCTCCAGGGAC TGGGGAACAGTTTGTCTGTCCGTATTGTAAGTTTACCTTTACCACAAAAC GAGACATGGATCGACATTTGAGATCACATACCGGTGAAAAACCTTTTCAT TGCGAGAAATTTTCTGTTGATGAGGAATCGCGTCAGGGATCATCAACAAA TGGTGTTAATCAAATCACACTTCCACAAGACGAATAGCGATGAAAGCTAT CAAACTTCCCCGTCTTCAAAAGATTTCTTTATCGGTAAAATTGTTCAAAT CATGGAGTTAGCCCTCAAACAGATCTTATCCTTGATGGACGCCAGCGATA TGACAAGATCGTTTGCAGATGAGACGATTGACGTCTTGGATCAGGACGTG GAAGGAGATATTGAAGTGACTGAACCAAAAATTACTAAGAGTGAAAAAGC GCGAATGATTTCTGAGGAGATTGGTGATGAATCACGTGTTATGAAAAACA TTCTGAACGATTACCAAGGACGATTCTCAATTTTTCGTGACGGTATTCTA AAGTTGAAACATTATTATGATACGATGAATGGTATTAACGATGAAGATGT TAACGCCAGAGACGAGGGTGGTGATGGCGGTGGTTGTGGCAGCGGTGGCG GTATTTTTGTTGATTCACCTTTAATTATAGATGTTGTTAACCATCATGCA GCTGACGACACCCATTCCATTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00053333-exon-scaffold_228-1575043694:472544..472731 | TCONS_00053333-exon-scaffold_228-1575043694:472544..472731 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1575043694:470034..470168 | TCONS_00053333-exon-scaffold_228-1575043694:470034..470168 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1575043694:468764..469006 | TCONS_00053333-exon-scaffold_228-1575043694:468764..469006 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1575043694:468508..468547 | TCONS_00053333-exon-scaffold_228-1575043694:468508..468547 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1575043694:467416..467996 | TCONS_00053333-exon-scaffold_228-1575043694:467416..467996 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1575043694:466587..466733 | TCONS_00053333-exon-scaffold_228-1575043694:466587..466733 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1575043694:466014..466267 | TCONS_00053333-exon-scaffold_228-1575043694:466014..466267 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:472544..472731 | TCONS_00053333-exon-scaffold_228-1510915933:472544..472731 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:470034..470168 | TCONS_00053333-exon-scaffold_228-1510915933:470034..470168 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:468764..469006 | TCONS_00053333-exon-scaffold_228-1510915933:468764..469006 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:468508..468547 | TCONS_00053333-exon-scaffold_228-1510915933:468508..468547 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:467416..467996 | TCONS_00053333-exon-scaffold_228-1510915933:467416..467996 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:466587..466733 | TCONS_00053333-exon-scaffold_228-1510915933:466587..466733 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1510915933:466014..466267 | TCONS_00053333-exon-scaffold_228-1510915933:466014..466267 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:472544..472731 | TCONS_00053333-exon-scaffold_228-1491911889:472544..472731 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:470034..470168 | TCONS_00053333-exon-scaffold_228-1491911889:470034..470168 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:468764..469006 | TCONS_00053333-exon-scaffold_228-1491911889:468764..469006 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:468508..468547 | TCONS_00053333-exon-scaffold_228-1491911889:468508..468547 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:467416..467996 | TCONS_00053333-exon-scaffold_228-1491911889:467416..467996 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:466587..466733 | TCONS_00053333-exon-scaffold_228-1491911889:466587..466733 | Clytia hemisphaerica | exon |
TCONS_00053333-exon-scaffold_228-1491911889:466014..466267 | TCONS_00053333-exon-scaffold_228-1491911889:466014..466267 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_228 | supercontig | scaffold_228:466014..472731 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
Term | Definition |
GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00053333 vs. Swiss-Prot (Human)
Match: FEZF2 (Fez family zinc finger protein 2 OS=Homo sapiens GN=FEZF2 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.200e-23 Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 3
Query: 1002 RNNSIATANNDYLESNMADFGLLPPGTGEQFVCPYCKFTFTTKRDMDRHLRSHTGEKPFHCEVCSKYFARKDFLTKHKLTHTGEKPYSCEQCNKRFSQRSNLNXXXXXXXXXXXXICKICQRGFHQMINLHRHEQIHCNVSKQFQCVWCTKMAYQ 1466
+ NS TA ++ + G G + F C C F ++ RH+ HTG +PF C+VC K F + L +HK+ HT EKP+ C QC K F++ S LN H+ H +C+ C +GFHQ N H+ H + KQ++C C K +Q
Sbjct: 247 KENSALTAERGGVKGHSKLPGGSADGKPKNFTCEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIRIHAGYKPFVCEFCGKGFHQKGNYKNHKLTH-SGEKQYKCTICNKAFHQ 400
The following BLAST results are available for this feature:
|