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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053395 ID=TCONS_00053395|Name=TCONS_00053395|organism=Clytia hemisphaerica|type=transcript|length=981bp
aaagactcacttttgaatttttttttgcttgaccataaaggacaatctaa
ttcctacgagttcgaccaaaaataacgatttctaactcaaactgggcatt
accggagggcttcgccctcctatatagcccatgtcgtatatatacgacat
cggcacttaaagggttaacaaCAATCTCATGCttttaatcaaaagattct
CTTGGATGCATTGAAAAAGGGGCACAGTATCCTGATACCTACCCGGCCTT
ATCAATATGATACTGAACCACAACCAAACATCATGGATTATTGTCTCAAA
GCTCAAAGAAATAAGGGTATGCCTTTTAACtgtagtttagacggcccact
ttttgtCCAGCCTATTCTAATTATGAATTGTGAAGTGGGCAGAAAGTTGA
cagtctaaagtcaatgcattttCCTCCTTTAAACGTTTCAATCTGTTCCA
AGCAAAGGTTTTAACTGCAAAAATTTTGCCAACTTGTTGCCCACTTGTTG
TCAACTTTTttcctactctaacaattaggaATAGACGTCGGCCGTCTAAC
ATAGAGCTTTGACACTGAAGTCTTTTAGaataaagtttgaaattttcatt
ttccccttGTAGCCATTCAAAGTTTAAAGCAAAAGAAATAACCGTTTAAA
AGATCTGATCTAAAGATACTAAGCTTATAATATAAAAAGGTGCTTGTGAT
TAAAAGGATGGTAGAGGAAATGCTTTGATGGTATCTTTTTTCTCTTAATC
AGATAGTCGTTTGGGCAGAGCTTTGGTGAGCTGTATCactttatcaaaag
aaagagtaaGATTCTTGATGAATTTGTTGAAGAACTGTAAGTCCCGAAGA
AAGGTTGGACAAAAGAAGCGAACATTTCTAACAAAAAACTGACGCAAATT
CCATTTTGTGCCAAGTTTTAAGTGATTATGTTTagacccagggggggggg
gtactttcGACCCTCAGACCTTTACCGGGac Run BLAST on NCBI transcript from alignment at scaffold_23:20957..21937+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053395 ID=TCONS_00053395|Name=TCONS_00053395|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at scaffold_23:20957..21937+ (Clytia hemisphaerica)
aaagactcacttttgaatttttttttgcttgaccataaaggacaatctaa
ttcctacgagttcgaccaaaaataacgatttctaactcaaactgggcatt
accggagggcttcgccctcctatatagcccatgtcgtatatatacgacat
cggcacttaaagggttaacaaCAATCTCATGCttttaatcaaaagattct
CTTGGATGCATTGAAAAAGGGGCACAGTATCCTGATACCTACCCGGCCTT
ATCAATATGATACTGAACCACAACCAAACATCATGGATTATTGTCTCAAA
GCTCAAAGAAATAAGGGTATGCCTTTTAACtgtagtttagacggcccact
ttttgtCCAGCCTATTCTAATTATGAATTGTGAAGTGGGCAGAAAGTTGA
cagtctaaagtcaatgcattttCCTCCTTTAAACGTTTCAATCTGTTCCA
AGCAAAGGTTTTAACTGCAAAAATTTTGCCAACTTGTTGCCCACTTGTTG
TCAACTTTTttcctactctaacaattaggaATAGACGTCGGCCGTCTAAC
ATAGAGCTTTGACACTGAAGTCTTTTAGaataaagtttgaaattttcatt
ttccccttGTAGCCATTCAAAGTTTAAAGCAAAAGAAATAACCGTTTAAA
AGATCTGATCTAAAGATACTAAGCTTATAATATAAAAAGGTGCTTGTGAT
TAAAAGGATGGTAGAGGAAATGCTTTGATGGTATCTTTTTTCTCTTAATC
AGATAGTCGTTTGGGCAGAGCTTTGGTGAGCTGTATCactttatcaaaag
aaagagtaaGATTCTTGATGAATTTGTTGAAGAACTGTAAGTCCCGAAGA
AAGGTTGGACAAAAGAAGCGAACATTTCTAACAAAAAACTGACGCAAATT
CCATTTTGTGCCAAGTTTTAAGTGATTATGTTTagacccagggggggggg
gtactttcGACCCTCAGACCTTTACCGGGac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053395-exon-scaffold_23-1491911889:20957..21937 | TCONS_00053395-exon-scaffold_23-1491911889:20957..21937 | Clytia hemisphaerica | exon |
| TCONS_00053395-exon-scaffold_23-1510915933:20957..21937 | TCONS_00053395-exon-scaffold_23-1510915933:20957..21937 | Clytia hemisphaerica | exon |
| TCONS_00053395-exon-scaffold_23-1575043694:20957..21937 | TCONS_00053395-exon-scaffold_23-1575043694:20957..21937 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:20957..21937 + |
Blast
The following BLAST results are available for this feature:
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