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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053402 ID=TCONS_00053402|Name=TCONS_00053402|organism=Clytia hemisphaerica|type=transcript|length=764bp
cctcttttcctctagatttgagagaaattttaaatttgatcgacgtttag
ggggccacatactgtacatGTATTTTCTCTTTCGAATTAGCACCATACCC
CGGCGTGGTTTTCACATAAATACATACACCCGTTTAAAGCTCTGAAGTtc
gggaaattttttcttttcttgcttgtgaaaggttaaagattcttcTCGTC
AGCCCATTGGGCTTTAAACCCAATGGTTTATGTTTTTCCCTCCATTTGGA
TACATCAAGTTTGTTATTTATATCATAATATAATCATcaataaaaattct
tttcaagTTTAGTAcctattgaaaaatattcaacaacaaaaacattcCAA
TTTTGAATATCACTATTCCATGTAGAGTTATACCAAATGGAAAACAATTG
CCAAATTTCACAAACTGCCAGAGAAATTTCAGATCTGAATCTGAATGGTG
AAGTCTGATAAAACTTTATTGTATCATCGCAACatcatcaaaaaattgta
ttttaaaattagcTGCTAACTATCAACAATCATCAAAACCCTTTCCAATC
GGTAGCATCAGACGTTGAACCAGGTGAACCTTGAAGTAGCCTTACACCAT
CTTTCAACGCTGGTGTTCCCATGTGATGTGGCATGATACGTGACGTCAAT
GTCAGTTCATAAGTCTGTTcagaaacattttcaaaacaaatggtTTCTTT
TAACGAAGAACATTCTGGACATTTGATTTCCAATGTTATTGTGTGACCGT
TCGTCCCATTACCT Run BLAST on NCBI transcript from alignment at scaffold_23:41983..42799- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053402 ID=TCONS_00053402|Name=TCONS_00053402|organism=Clytia hemisphaerica|type=transcript|length=817bp|location=Sequence derived from alignment at scaffold_23:41983..42799- (Clytia hemisphaerica)
CCTCTTTTCCTCTAGATTTGAGAGAAATTTTAAATTTGATCGACGTTTAG
GGGGCCACATACTGTACATGTATTTTCTCTTTCGAATTAGCACCATACCC
CGGCGTGGTTTTCACATAAATACATACACCCGTTTAAAGCTCTGAAGTTC
GGGAAATTTTTTCTTTTCTTGCTTGTGAAAGGTTAAAGATTCTTCTCGTC
AGCCCATTGGGCTTTAAACCCAATGGTTTATGTTTTTCCCTCCATTTGGA
TACATCAAGTTTGTTATTTATATCATAATATAATCATCAATAAAAATTCT
TTTCAAGTTTAGTACCTATTGAAAAATATTCAACAACAAAAACATTCCAA
TTTTGAATATCACTATTCCATGTAGAGTTATACCAAATGGAAAACAATTG
CCAAATTTCACAAACTGCCAGAGAAATTTCAGATCTGAATCTGAATGGTG
AAGTCTGATAAAACTTTATTGTATCATCGCAACATNTCTCAATTTGAATG
GTGAAGTCTGATAAAACTTTATTGTATCATCGCAACATCATCAAAAAATT
GTATTTTAAAATTAGCTGCTAACTATCAACAATCATCAAAACCCTTTCCA
ATCGGTAGCATCAGACGTTGAACCAGGTGAACCTTGAAGTAGCCTTACAC
CATCTTTCAACGCTGGTGTTCCCATGTGATGTGGCATGATACGTGACGTC
AATGTCAGTTCATAAGTCTGTTCAGAAACATTTTCAAAACAAATGGTTTC
TTTTAACGAAGAACATTCTGGACATTTGATTTCCAATGTTATTGTGTGAC
CGTTCGTCCCATTACCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053402-exon-scaffold_23-1575043694:42317..42799 | TCONS_00053402-exon-scaffold_23-1575043694:42317..42799 | Clytia hemisphaerica | exon |
| TCONS_00053402-exon-scaffold_23-1575043694:41983..42263 | TCONS_00053402-exon-scaffold_23-1575043694:41983..42263 | Clytia hemisphaerica | exon |
| TCONS_00053402-exon-scaffold_23-1510915933:42317..42799 | TCONS_00053402-exon-scaffold_23-1510915933:42317..42799 | Clytia hemisphaerica | exon |
| TCONS_00053402-exon-scaffold_23-1510915933:41983..42263 | TCONS_00053402-exon-scaffold_23-1510915933:41983..42263 | Clytia hemisphaerica | exon |
| TCONS_00053402-exon-scaffold_23-1491911889:42317..42799 | TCONS_00053402-exon-scaffold_23-1491911889:42317..42799 | Clytia hemisphaerica | exon |
| TCONS_00053402-exon-scaffold_23-1491911889:41983..42263 | TCONS_00053402-exon-scaffold_23-1491911889:41983..42263 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_23 | supercontig | scaffold_23:41983..42799 - |
Blast
The following BLAST results are available for this feature:
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