TCONS_00053436 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053436
Unique NameTCONS_00053436
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4833

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053436 ID=TCONS_00053436|Name=TCONS_00053436|organism=Clytia hemisphaerica|type=transcript|length=4833bp
ttttttgtcaaatatcaATGTCTTCAGGTTCTTTTGCTGTTGTTTCTTGT
GAGAGGGTGAAAGACtgaaaacaaaatgaaagacaTGGAAGTTGAAGAAA
CTGTCAATGAAGAAGAACTTAATAATGAAACTTCGTGGTCAGAGAAAATG
CTAAAACTGACCAAATCTATTCATTCTTTCAACAGCCAAGCAAACTATGA
TGATGGTATCTCTCTAAATTGTACTCCTTATTGAAACCCCTCCCTTTCCT
GACCTTTTCCTGACCCAAAATAACTGTTTCAATTTTGATGATTAATTCCT
AGCAGCCCCTTTTATCCCTTATTTATGGAATGCCTTATTTATGGAATGCC
TTATTTATGgaatgagaaagaaagaaatccAAGGTaatcaaaGGATTATG
TTCCATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAGAGGTG
ATCAAAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAGGATTT
GCTCAccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAAGGACA
GGGAAGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAAAGGAC
AGAGATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGACATACGAGGt
caaagaaagtttcaattccGAAGTTCTACTCGATGTAGAAAGATCAGCTT
GCTGTCTCTTCGGCTTTCACACGTACGGTGTCCACGTAAACGGGTACGTA
AAGAACGATCAGGGCGACGTTTACATGTGGGTCTNGTCCACGTAAACGGC
TACGTAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTCAAGGCGAGC
GAAGACCAAGCCAACATACCCAGGAAAGCTCGACAATACTGTCGCAGGTG
GAATCGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGAATGCCTT
GAAGAAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGACCAGCTGG
GACCATCAGttacTTTCTTTCAAATGAGCTTGGCCTCCATCCGGAGACGG
AATTTGTTTACGATTTGGAACTTCCCCGCTCGTTCGAGCCAAAATGTAAC
GATGACGAAGTTTCCGATTTCTATCTTTTACCCATCAAGGAGGTAAAAGA
ACTTATATCAACAAAAGAGTTCAAGCCAAACTCCGCGTTAGTGATACTGG
ATTTTTTGATCCGGCATGGTTCAATTAAACCAGATGAAGaACCACATTAC
GTTGAGTTCGTCAAAGGTTGTCATCGGACGCTGGCCTATTGATGAATGCG
AATGGAGTATTGCATTGTTGCTGATTCTGTTCTTGTATATCTGCTGACCA
GTCATCGAACCGTATTTTCCATTGAAAATTCTACCGCCGTTGAATCTATG
TCCGTTTCTCGGGATTAGATCACAGGAATTTTCCGATTTTGCTATAAAGA
TGCAAAATGTGACTGAGCGCTTTGGGAATATTTGAGCCAAAAACAAGATT
CAATTAGTTGATATTATGTTTTGTAAGCCTATCCGTGCTCTTTTATTTTA
CGTGTCCCAGTGCTTTTACAACTTAACGAGTGTCACATTTGTTACGGGTA
GTCACTAAAGGGTTTTAGGGTTTCCTGTTTTAATCATTTCAACTTTATGC
TCACTGTTCAATGTTTTGTATATCCATACAAATTATCACTAGTTGGTATA
ACGTTTCTTTACAGAGAGTGATACCAATGACCTGGCATGTGTTCACCtac
ataaaactgaaaatatttcacGATATTGTACTTGTTTTGTTTCTCTAGAT
TTGTTTTCCTTACTTTGAATAAGGATTATCTTAAATCTCTATTGActatt
taaaataattttgtatttaCAAAACCCactatttattaaaaaaatttgta
cagaaatttttataggaaaattgttttttaaaaaagataactTTATCTTA
TCACGAGGCATTTTTTCCAATCCATATTTTCGAGAAAAAGTGAACAAACT
TTTCAGTGATTAAACTATTAACTAGCATCTATCATGATCGCAGCTAAACA
AAAACCTCCATCTTTCGAccataaattcaaaaaatgagtTCCCGCAGTCA
CATCACTAGCAACAGTATCAACCTGTGTCCGACGTCCAGGGTCACCGGGC
TTTCCTTCTTGGATGAAAACCGGTTGATCGTTTTTATCATCTATCCAGAT
CATTGAAGAGCCGCCCCATTTTGAATGCGTTGTTATGGCAACTTCAAATC
GTTTATCTTTATTTTCAGGTGATTTTGGAATGGTAAAGACGAGCTTCAGA
GAGGATGTCGGTTTATCCGTTTTCTCAGATTTATAACAAATAACTTTATC
AAATCTAATTGGAAAGTTAGTAGCATATTGTATTTTAAAGCCATCATTTG
AAGCCACGCTCACCTCCAAAGTGTTATGGACTGGATCTTTTTCATCGGGT
CGTATCAAGGTCCAACAATATGGTTCTGGATGTTTTGGGCCAATGAATAA
GGGGTCTGGTAACAAATACTGGTCCTGAAAATTGACAATATCACCATCGT
GTTTTATGGCGTATTGTAAAACAGCTCGCATCACGTGTCGCAGATGAAGT
AATATCAATAATGCTGATTGCGCATGCCCCTTAAGAGATGGATGGTATTG
GTCAACACTGAATAAATCAGCCAATAGAAATCCTGGTCTGGATTTAACTA
AGCCGTTACAAACCATGGCTCTCCAACTCAATGTAGGTACTTTATAATAA
CTCGCTATAGTATGTTCTTGTTGGTCTTCAAAGTTCGGACAATCTGATAA
ACCAGAATTTTTATAATCGATCCCTTTAAAGAAATTCAGATAAAGTAATG
CTGGTTTCGTTGGTAAATCAAGAATCATTCTAGTGAACCTTTCTAACGGC
CTTGCACCTTTCGTGGGAAACGTTTTATATCTATTATAATCATTAGCTGA
AAGCTCCCATATGACTAAATCAACATTCTTCTTCAGGTGGTTTTTGAcac
aatatgaaaaataatctGTCCCTATAGAACCAATGGCTGCATTGTTTACT
TTCATTTTGGAACCAGTGACAGGGAAAATCCATTGGTTCCACCAATCAAC
TACGCCCTTATAATAAAGTCCTTCTATGCTTCCACGATCTTTATATAACC
CACCACCAGCACTTATGGAGCCACCAACTACACTCAATGTTATATCATGA
CCTGTAATAGCTTTTCGCATCACACCCTTTAATCTCTCTATGTATCCCGG
ATAAACAAGTCCTGAACGAATCAGTATGGCATTCAAGTCTAGAGAAGATA
GTGTTTTGTATGGATATCGCCAAGATTCTAAAGGGTCCTTGTTTAGGTAT
TGAACGATAGCCTTGGCTTTTTCAATATTAATGACTTTAGTTTTGTTTGA
GGGTTTAGAATTTGATGAAGCAAGTAAGTTCATCAAGTTCCCTGAGTTTG
AAATGTTTGGCTGTGATTCTAGAGCGCTTGATATAGTAACTGCAAAAGAT
TGGTTTTGCTGTTTGGCTGTTGGATCAAAGCTTGGCTTCTGCTGTTGTTT
TACACCATTTAGAATATTTGTATTTGATGATTGTTGTTTTGGTTTTGTAG
AAGCGGTTTCATTGTTTGTGGATATCGCGTTTTCTTCCATGATACTGGGG
ATGGATGAATTTGCGTTATCCACCGAATCTGGATCTGACCATGTGTTGTT
TGTGAGTCGAAAATTGTTGGGTAGTTTTGGTCTGGAAATTACCAAGTCAT
CGCTATTATCGTTTTCTGTTTCACCTTTTTGTTGGCCGTCAGTGGATGAT
GATTTTTTGTCTCCAGTGCGGTGGAACTCTGTCTTTTTCTTGTAATGTTC
TTCTATGGTGTAATGTTTTGGATGAGGGTTGGTGGGTGGCATATGGTGAA
GAGAAGATATAACTATTGTTTTGTTTGTGTTGTTAGATGTCAATGATTTA
TTGTTCGTTGCAGTTGTAAATATCACGTGTCCAGgttgtttgttttgaat
aacctTATTCGTTGtcaatgttttgtttttcgttttgtttttctgttttt
gaatgtttttagcGACCGGTTTAGCGATTTTTTTCTGCTGCTTGATTGCT
TGTTTCTTTTCGAatggtttttttggactttgtttcTCAGTTCTAATCTC
AGCAGAATTTGCAGAAGTTCCTTTGGTTGTCTCACTCTTCTCTTGACTTG
ATGAAGAAACCGCTCTAATCAAATTCTTATCTTCAGTATTCAAATTCTTC
ATCTTATCTCGAACTTGTTGTAACTTTGCGATATCTAAATCCAGTTCAGT
TTGAGGTGTCGAGTCTGTTTCTTCTTGATGTGGGTCATCAACACTTCTGG
TCATCTGATCTTTAGGTGTGATCACGATTACCCGCACGTGTTTATCTTTG
ATCGGTTGTTTGATCTCATCCACGAATTTCTCTTGAATCTGTTCATAACT
TCTCTCCATATCTTGATAAACCTCATCCTTTTGGACGGCATTTTCTTCCA
ACGATTCTCGATCAATAATAATCGTAAACCCTTCATCGAAATCTTCGCTG
CTTCGTTTTTGAATAATTGAAGACCGTTTTTCCACAATCGGATTTATCGG
ATTCTCTTGTTCGGTATCAATGACGATCAATGCGCTGTCACTTTTCTCGT
CGTAATTTTCGAGGGTTTGCTCCAACTCATTATAACTCTCTTGTTCTTGG
AGCAATGTTGGTGAGCTTGAAAGGCTTTCTTGTTGGCACGTGATTCGACA
TGTTGAAAGGAGGAGAAACAAAGATAAGGAATGGACAAAGAGTAACATGC
TGCTCGCCTAAAAAATAAAGCAGGAAACAATGG
Run BLAST on NCBI

transcript from alignment at scaffold_231:222367..230151+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053436 ID=TCONS_00053436|Name=TCONS_00053436|organism=Clytia hemisphaerica|type=transcript|length=7785bp|location=Sequence derived from alignment at scaffold_231:222367..230151+ (Clytia hemisphaerica)
ttttttgtcaaatatcaATGTCTTCAGGTTCTTTTGCTGTTGTTTCTTGT
GAGAGGGTGAAAGACtgaaaacaaaatgaaagacaTGGAAGTTGAAGAAA
CTGTCAATGAAGAAGAACTTAATAATGAAACTTCGTGGTCAGAGAAAATG
CTAAAACTGACCAAATCTATTCATTCTTTCAACAGCCAAGGTATATAATT
GTAATTCCTCACGAAAAATCTTTTCCTTCTTGTTAAAAAGATGCTTTTCT
ATTTCAAACGTCAGGTTTTCATTTAGATCTTTACCTTATCTTTTGCAATA
TGACAGCTATCAGTCAGTTTTATTGTGAAAATTGATCAAAACTAGTCAAA
GCTCTTCTCATCGCAGTAAGCAGGCGAACTTCAATATGGtactttgtttt
tcaaaaaaaaatgtacaaGTTTAAATTAACATTGtgagaaaaatagaaat
attatatatctaaacttttcaccatcagaaagaagaaaggccaacttaaa
ttttgagctgtcATATCTTAAATTTGCTTCACGTGTTAGTTTAAGGTTTT
AATTGCTGTAATTaggatatttcgattttaacGATTCTTTTTTGCGGTTT
TTTGTAAGCTtgattttcattctttttcgaAAGGGAATATTTTCGAACTT
TCTTTATAACTTTTAAACACTTGAAGCAAATTAAATAAAGTATGATAGCT
CCAAATTCAATTTAGTCTTTCCTCCTTCGAATGGCGAAATATTTGgattt
ataacatttttagttttctcagGTTTTCTCACAAACTAACTAGaaacttg
tacacttttttctGAAACACCCGTTGTTTTGAGATTATAGGCTTTTGCTA
TAAAAGGTACTTTTCCGTCTGAGACCACTGTACAGTTATTTCTGTCATCT
TGGATACTAATAACAAATTGGTCTTTCTAATTTCAGCAAACTATGATGAT
GGTATCTCTCTAAATTGTACTCCTTATTGAAACCCCTCCCTTTCCTGACC
TTTTCCTGACCCAAAATAACTGTTTCAATTTTGATGATTAATTCCTAGCA
GCCCCTTTTATCCCTTATTTATGGAATGCCTTATTTATGGAATGCCTTAT
TTATGgaatgagaaagaaagaaatccAAGGTGTATGTAActtttcatttt
gtatttgctgaaaattgtttcattttaacACTACCAAGGAAAAGTCGAAT
TTTTATACTCTCCAGATCTTTTAGACTTTTTAAAGGCATTGTCCATACTG
CTCCAAATTGTACGTaagttattattatttttttagaatcaaaGGATTAT
GTTCCATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAGAGGT
GATCAAAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAGGATT
TGCTCAccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAAGGAC
AGGGAAGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAAAGGA
CAGAGATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGGTAATCATAT
TTTCCACTCTAATCATGAATTGCACAACCTTTAGCCAAACTAATTTTGTA
TCTTCTATCTTTACTTTATTAAATAAAGACCTTATACAGGACGCCTTTTT
GACACGAAAAACAAACCCATATTCTAAGTTGATAAGTATTTGATAGGGAA
AAAGATTAGGTTCGAATAGCTAGAGGATCCCTTACCTTATCGGttaatta
tttcaaattgaagCAAGATTGATTAGGATTTTCTTCTCTCATAAGATTGC
CCGCGAAATAGCCGAAAGCCCACCATATAGCAGAGATAAGTGACGTCTTT
CCGATACAAATCATTTGAGTAGGATCCGTTCTAATAAATGGGTTCGTACG
TAAAATTAGCCACAAATGGTATTATAAGAGGATGATGGTCTGTTCACTGT
AGTGAGGGATATGAATCTATAAAACAATAAACTCATCTCTCAATCTTAGA
CATACGAGGtcaaagaaagtttcaattccGAAGTTCTACTCGATGTAGAA
AGATCAGCTTGCTGTGAGTGAATGACTTGTTTTATTATTAACCATTGAAA
GAATGTAAAATCATCTTTAACCAAGGAACACAACTTATCTTTGCCGATGG
TCCGTTCCTTTTTACACAGTACAAGAACTCTTTtcggaaatcgaaaattt
gatCTGCACATACTCGTAGTCGGCAGCAAATCTGATAAGCGTACAAAATG
TGGTTTTGATTTTGTTCAGCctcgaaaaaactaaatttcttAGATGTCGA
TAGAAATTTGTGAATTTGATAGAATGGTGATAACACCGAAATATatcgtt
tgattgtttttaacattttaagaatctttgaaaaatggcctcaaattaaa
acataatttaatttgattttatttcGGTCAAACCTGTGTATAACCGCCAC
ATTCTTTTTTCGTGCTAGGTCTCTTCGGCTTTCACACGTACGGTGTCCAC
GTAAACGGGTACGTAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTN
GTCCACGTAAACGGCTACGTAAAGAACGATCAGGGCGACGTTTACATGTG
GGTCTCAAGGCGAGCGAAGACCAAGCCAACATACCCAGGAAAGCTCGACA
ATACTGTAAGCTTTAACATTCGAGTCTTTGGAAGTGTTTCAATAGTGCTA
AAATGTAAGAAGGTGACATAACCATTGTTGGTTACAAAAGAATGTATCTT
TAGGAAGATTTTGATGTTCTAACTTCTTTCACTTTCAACTCAGGTCGCAG
GTGGAATCGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGAATGC
CTTGAAGAAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGACCAGC
TGGGACCATCAGGTATTTCCTTAAATCAATCATAATTATGggttttcaat
attttacctCAAAACCTTTTGTAGACACAAAgatgtatttttgtttttca
tcggttactctttttttatttttagttacTTTCTTTCAAATGAGCTTGGC
CTCCATCCGGAGACGGAATTTGTTTACGATTTGGAACTTCCCCGCTCGTT
CGAGCCAAAATGTAACGATGACGAAGTTTCCGATTTCTATCTTTTACCCA
TCAAGGAGGTAAAATCATGTTTTGTTGCTGTTCTGGTACAGGGTGGGCAA
AAATATAAATATGGTCAGACAAAAATTGTGTTACATATGGAAAGCAATTA
GTGCCATTTTTTGCCCACCCTTTAATAACATTACTTCTCAGCTCTTTCCT
CTTACTTGTTGAAGAAGAACCGAGTGTTACTGTCTTTGAAAATATGGATA
CCGTAttacttcttttaaacgcccccctcgaataaacgcccctcctaaca
aggaaaattatttaataaacgcccccctcaAATGAACGCCCCCTCTAGGG
GAAGGGTGCTTATTGgaaacttgtgactttaatacttcaataccagtgtt
gattgggttggaaaaggaagattttaatcatttcttgtaaccagagcagt
tttcgatgcaattttagtcgttgaaccaaagaaattttgcactaaaatcc
tgatagagaactaaaacaaagggtatatttgctctaaatattcgatttta
gactaaaataatttaataaacgcccccttcttttaaacgccccgggcgtt
tattcggAGTAATACGGTATATGtagaatatttttctaaatagCTTAGAA
CATAACTATTTCCTTTCAAGGTAAAAGAACTTATATCAACAAAAGAGTTC
AAGCCAAACTCCGCGTTAGTGATACTGGATTTTTTGATCCGGCATGGTTC
AATTAAACCAGATGAAGGTATTCTATTTGTTGTTTGTTACTTTACCCTCT
TGAGTGAATTGTAGTGAATAAAACGATAACATTCGAAGAAAAGGTTCTGG
AAATGTAATGGAATTCTAGCTTGATTTGAGTAGAAGATTCATTCAggaag
atttgaaaatttcaaactaccAAATAGCCGGATGGTTGaaagttttactt
ttgaaaacccaataCTAAAGGTCAAAATCAAGCTAATTTGTAAGCTAATA
ACTGAAAGCATTCTTGTAAACATGGGTCCTGCGATTGAGGGCTGAAGACA
aggaaaaacaaggaaacatttttctttcattttccttttagaACCACATT
ACGTTGAGTTCGTCAAAGGTTGTCATCGGACGCTGGCCTATTGATGAATG
CGAATGGAGTATTGCATTGTTGCTGATTCTGTTCTTGTATATCTGCTGAC
CAGTCATCGAACCGTATTTTCCATTGAAAATTCTACCGCCGTTGAATCTA
TGTCCGTTTCTCGGGATTAGATCACAGGAATTTTCCGATTTTGCTATAAA
GATGCAAAATGTGACTGAGCGCTTTGGGAATATTTGAGCCAAAAACAAGA
TTCAATTAGTTGATATTATGTTTTGTAAGCCTATCCGTGCTCTTTTATTT
TACGTGTCCCAGTGCTTTTACAACTTAACGAGTGTCACATTTGTTACGGG
TAGTCACTAAAGGGTTTTAGGGTTTCCTGTTTTAATCATTTCAACTTTAT
GCTCACTGTTCAATGTTTTGTATATCCATACAAATTATCACTAGTTGGTA
TAACGTTTCTTTACAGAGAGTGATACCAATGACCTGGCATGTGTTCACCt
acataaaactgaaaatatttcacGATATTGTACTTGTTTTGTTTCTCTAG
ATTTGTTTTCCTTACTTTGAATAAGGATTATCTTAAATCTCTATTGActa
tttaaaataattttgtatttaCAAAACCCactatttattaaaaaaatttg
tacagaaatttttataggaaaattgttttttaaaaaagataactTTATCT
TATCACGAGGCATTTTTTCCAATCCATATTTTCGAGAAAAAGTGAACAAA
CTTTTCAGTGATTAAACTATTAACTAGCATCTATCATGATCGCAGCTAAA
CAAAAACCTCCATCTTTCGAccataaattcaaaaaatgagtTCCCGCAGT
CACATCACTAGCAACAGTATCAACCTGTGTCCGACGTCCAGGGTCACCGG
GCTTTCCTTCTTGGATGAAAACCGGTTGATCGTTTTTATCATCTATCCAG
ATCATTGAAGAGCCGCCCCATTTTGAATGCGTTGTTATGGCAACTTCAAA
TCGTTTATCTTTATTTTCAGGTGATTTTGGAATGGTAAAGACGAGCTTCA
GAGAGGATGTCGGTTTATCCGTTTTCTCAGATTTATAACAAATAACTTTA
TCAAATCTAATTGGAAAGTTAGTAGCATATTGTATTTTAAAGCCATCATT
TGAAGCCACGCTCACCTCCAAAGTGTTATGGACTGGATCTTTTTCATCGG
GTCGTATCAAGGTCCAACAATATGGTTCTGGATGTTTTGGGCCAATGAAT
AAGGGGTCTGGTAACAAATACTGGTCCTGAAAATTGACAATATCACCATC
GTGTTTTATGGCGTATTGTAAAACAGCTCGCATCACGTGTCGCAGATGAA
GTAATATCAATAATGCTGATTGCGCATGCCCCTTAAGAGATGGATGGTAT
TGGTCAACACTGAATAAATCAGCCAATAGAAATCCTGGTCTGGATTTAAC
TAAGCCGTTACAAACCATGGCTCTCCAACTCAATGTAGGTACTTTATAAT
AACTCGCTATAGTATGTTCTTGTTGGTCTTCAAAGTTCGGACAATCTGAT
AAACCAGAATTTTTATAATCGATCCCTTTAAAGAAATTCAGATAAAGTAA
TGCTGGTTTCGTTGGTAAATCAAGAATCATTCTAGTGAACCTTTCTAACG
GCCTTGCACCTTTCGTGGGAAACGTTTTATATCTATTATAATCATTAGCT
GAAAGCTCCCATATGACTAAATCAACATTCTTCTTCAGGTGGTTTTTGAc
acaatatgaaaaataatctGTCCCTATAGAACCAATGGCTGCATTGTTTA
CTTTCATTTTGGAACCAGTGACAGGGAAAATCCATTGGTTCCACCAATCA
ACTACGCCCTTATAATAAAGTCCTTCTATGCTTCCACGATCTTTATATAA
CCCACCACCAGCACTTATGGAGCCACCAACTACACTCAATGTTATATCAT
GACCTGTAATAGCTTTTCGCATCACACCCTTTAATCTCTCTATGTATCCC
GGATAAACAAGTCCTGAACGAATCAGTATGGCATTCAAGTCTAGAGAAGA
TAGTGTTTTGTATGGATATCGCCAAGATTCTAAAGGGTCCTTGTTTAGGT
ATTGAACGATAGCCTTGGCTTTTTCAATATTAATGACTTTAGTTTTGTTT
GAGGGTTTAGAATTTGATGAAGCAAGTAAGTTCATCAAGTTCCCTGAGTT
TGAAATGTTTGGCTGTGATTCTAGAGCGCTTGATATAGTAACTGCAAAAG
ATTGGTTTTGCTGTTTGGCTGTTGGATCAAAGCTTGGCTTCTGCTGTTGT
TTTACACCATTTAGAATATTTGTATTTGATGATTGTTGTTTTGGTTTTGT
AGAAGCGGTTTCATTGTTTGTGGATATCGCGTTTTCTTCCATGATACTGG
GGATGGATGAATTTGCGTTATCCACCGAATCTGGATCTGACCATGTGTTG
TTTGTGAGTCGAAAATTGTTGGGTAGTTTTGGTCTGGAAATTACCAAGTC
ATCGCTATTATCGTTTTCTGTTTCACCTTTTTGTTGGCCGTCAGTGGATG
ATGATTTTTTGTCTCCAGTGCGGTGGAACTCTGTCTTTTTCTTGTAATGT
TCTTCTATGGTGTAATGTTTTGGATGAGGGTTGGTGGGTGGCATATGGTG
AAGAGAAGATATAACTATTGTTTTGTTTGTGTTGTTAGATGTCAATGATT
TATTGTTCGTTGCAGTTGTAAATATCACGTGTCCAGgttgtttgttttga
ataacctTATTCGTTGtcaatgttttgtttttcgttttgtttttctgttt
ttgaatgtttttagcGACCGGTTTAGCGATTTTTTTCTGCTGCTTGATTG
CTTGTTTCTTTTCGAatggtttttttggactttgtttcTCAGTTCTAATC
TCAGCAGAATTTGCAGAAGTTCCTTTGGTTGTCTCACTCTTCTCTTGACT
TGATGAAGAAACCGCTCTAATCAAATTCTTATCTTCAGTATTCAAATTCT
TCATCTTATCTCGAACTTGTTGTAACTTTGCGATATCTAAATCCAGTTCA
GTTTGAGGTGTCGAGTCTGTTTCTTCTTGATGTGGGTCATCAACACTTCT
GGTCATCTGATCTTTAGGTGTGATCACGATTACCCGCACGTGTTTATCTT
TGATCGGTTGTTTGATCTCATCCACGAATTTCTCTTGAATCTGTTCATAA
CTTCTCTCCATATCTTGATAAACCTCATCCTTTTGGACGGCATTTTCTTC
CAACGATTCTCGATCAATAATAATCGTAAACCCTTCATCGAAATCTTCGC
TGCTTCGTTTTTGAATAATTGAAGACCGTTTTTCCACAATCGGATTTATC
GGATTCTCTTGTTCGGTATCAATGACGATCAATGCGCTGTCACTTTTCTC
GTCGTAATTTTCGAGGGTTTGCTCCAACTCATTATAACTCTCTTGTTCTT
GGAGCAATGTTGGTGAGCTTGAAAGGCTTTCTTGTTGGCACGTGATTCGA
CATGTTGAAAGGAGGAGAAACAAAGATAAGGAATGGACAAAGAGTAACAT
GCTGCTCGCCTAAAAAATAAAGCAGGAAACAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033734XLOC_033734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053436-exon-scaffold_231-1491911889:222367..222556TCONS_00053436-exon-scaffold_231-1491911889:222367..222556Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:222367..222556TCONS_00053436-exon-scaffold_231-1510915933:222367..222556Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:222367..222556TCONS_00053436-exon-scaffold_231-1575043694:222367..222556Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:223303..223497TCONS_00053436-exon-scaffold_231-1491911889:223303..223497Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:223303..223497TCONS_00053436-exon-scaffold_231-1510915933:223303..223497Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:223303..223497TCONS_00053436-exon-scaffold_231-1575043694:223303..223497Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:223653..223906TCONS_00053436-exon-scaffold_231-1491911889:223653..223906Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:223653..223906TCONS_00053436-exon-scaffold_231-1510915933:223653..223906Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:223653..223906TCONS_00053436-exon-scaffold_231-1575043694:223653..223906Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:224366..224429TCONS_00053436-exon-scaffold_231-1491911889:224366..224429Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:224366..224429TCONS_00053436-exon-scaffold_231-1510915933:224366..224429Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:224366..224429TCONS_00053436-exon-scaffold_231-1575043694:224366..224429Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:224835..225021TCONS_00053436-exon-scaffold_231-1491911889:224835..225021Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:224835..225021TCONS_00053436-exon-scaffold_231-1510915933:224835..225021Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:224835..225021TCONS_00053436-exon-scaffold_231-1575043694:224835..225021Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:225160..225278TCONS_00053436-exon-scaffold_231-1491911889:225160..225278Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:225160..225278TCONS_00053436-exon-scaffold_231-1510915933:225160..225278Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:225160..225278TCONS_00053436-exon-scaffold_231-1575043694:225160..225278Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:225392..225524TCONS_00053436-exon-scaffold_231-1491911889:225392..225524Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:225392..225524TCONS_00053436-exon-scaffold_231-1510915933:225392..225524Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:225392..225524TCONS_00053436-exon-scaffold_231-1575043694:225392..225524Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:226137..226233TCONS_00053436-exon-scaffold_231-1491911889:226137..226233Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:226137..226233TCONS_00053436-exon-scaffold_231-1510915933:226137..226233Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:226137..226233TCONS_00053436-exon-scaffold_231-1575043694:226137..226233Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1491911889:226558..230151TCONS_00053436-exon-scaffold_231-1491911889:226558..230151Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1510915933:226558..230151TCONS_00053436-exon-scaffold_231-1510915933:226558..230151Clytia hemisphaericaexon
TCONS_00053436-exon-scaffold_231-1575043694:226558..230151TCONS_00053436-exon-scaffold_231-1575043694:226558..230151Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:222367..230151 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.231814	0.378334	0.527899	0.593671	1.40241	0.761175	3.63911	4.70717	1.1292	0.819311	1.46918	2.76937	4.98144	2.93406	2.96881	7.79279	2.59048	3.05068	0	0.132997	2.06885	3.87871	1.86239	1.91061	1.37241	4.0753	0.106788	0.109684	0.194586	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013830SGNH_hydro
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053436 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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