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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053513 ID=TCONS_00053513|Name=TCONS_00053513|organism=Clytia hemisphaerica|type=transcript|length=1227bp
ACCACTTTAGTAGTATGGTCCAATTTTTGTCTATATCCAGCCAGACCCag
ccattttttcatttcaaattttccaattttcttattaaacattttttata
aacagGGCCCTtgccacttttttgcaaagcaaaaaaaaatttctcttcac
ctaatttttttttttctggcccGTCGGTGCAAACCAGGTGCAAACCAtgg
gttgcgcctccttagtcactatatttttgttggcctcctcactttcaaaa
tcgtgACGTGGGCCCTGATAAATAATAAGTAATTTTCTATAATCACCAAC
TTGCCTTAAATAACATATAATGTCTGGGATTTTAGAATTGCTCCCTTCCT
TAAAAGGAACTATGCGTCCACCAAAGTAACCATTTGTGAACTTCAAGAAT
AAAGATTTCATGAAACTTTTAATTAGAGAAGAATTCTTTGAAATGCAGTA
TTTGAGATATTGAGTCTCACCCACTACTTTGAGTCAATTTTGGATTTGGC
AAACTTAACTGAATATTTGGTATCGGGAGTCCCCTAATtcctagattttt
gaaaaataaatttgaaatttcacaaaTCCTGTAAAAGATTAATTCTTCCC
TTATTAATGTTAGGAATAatatatgtttcaaatatttctggTTACGTACA
ACACTTTTCATATACCCATATTATATAACTAAGCCATGGGAAAATCTATT
CTTTAAACTTGTGAGGAATGGTTTTATTAAGGTAAACCCTGTCAGAAAAA
TAACTTGTAAACACCTATTATTGCATTTTCTTATGcactttttattatat
ttatatttCTCAAGGATATTATGCAATCtgggaaaaattttaaaatttgg
gaAAAGTTTTACTTGTTCTAAAAGGGAGTAACATTACTCCcctttaaaac
aagtaaaaCTTTTAGTGAAATAGCTATAATTTTCTATGCCATTATGGGCT
AGTAGAAATTCGttcgttctttttttattttgaaataccCCTCATATCTA
CCtgtatttttattataaaacatAGCTTGAAGAATGGTTGATTCGCATTT
TTGTTTGTCCTTTTCCAACAGCTCCAATAAACTAGAACTTGACATATTTA
CAGATAGGATTCTTATGAATTAGCTACAATTTTTAAAAgtcttttaagtt
tttaaaattttgtaaataaaatatcaaaaaagaaatgtttttatttttta
ttactttgtaCATTTTTATATAGCTAG Run BLAST on NCBI transcript from alignment at scaffold_232:53815..55041 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053513 ID=TCONS_00053513|Name=TCONS_00053513|organism=Clytia hemisphaerica|type=transcript|length=1227bp|location=Sequence derived from alignment at scaffold_232:53815..55041 (Clytia hemisphaerica)
CTAGCTATATAAAAATGtacaaagtaataaaaaataaaaacatttctttt
ttgatattttatttacaaaattttaaaaacttaaaagacTTTTAAAAATT
GTAGCTAATTCATAAGAATCCTATCTGTAAATATGTCAAGTTCTAGTTTA
TTGGAGCTGTTGGAAAAGGACAAACAAAAATGCGAATCAACCATTCTTCA
AGCTatgttttataataaaaatacaGGTAGATATGAGGggtatttcaaaa
taaaaaaagaacgaaCGAATTTCTACTAGCCCATAATGGCATAGAAAATT
ATAGCTATTTCACTAAAAGttttacttgttttaaaggGGAGTAATGTTAC
TCCCTTTTAGAACAAGTAAAACTTTtcccaaattttaaaatttttcccaG
ATTGCATAATATCCTTGAGaaatataaatataataaaaagtgCATAAGAA
AATGCAATAATAGGTGTTTACAAGTTATTTTTCTGACAGGGTTTACCTTA
ATAAAACCATTCCTCACAAGTTTAAAGAATAGATTTTCCCATGGCTTAGT
TATATAATATGGGTATATGAAAAGTGTTGTACGTAAccagaaatatttga
aacatatatTATTCCTAACATTAATAAGGGAAGAATTAATCTTTTACAGG
AtttgtgaaatttcaaatttatttttcaaaaatctaggaATTAGGGGACT
CCCGATACCAAATATTCAGTTAAGTTTGCCAAATCCAAAATTGACTCAAA
GTAGTGGGTGAGACTCAATATCTCAAATACTGCATTTCAAAGAATTCTTC
TCTAATTAAAAGTTTCATGAAATCTTTATTCTTGAAGTTCACAAATGGTT
ACTTTGGTGGACGCATAGTTCCTTTTAAGGAAGGGAGCAATTCTAAAATC
CCAGACATTATATGTTATTTAAGGCAAGTTGGTGATTATAGAAAATTACT
TATTATTTATCAGGGCCCACGTcacgattttgaaagtgaggaggccaaca
aaaatatagtgactaaggaggcgcaacccaTGGTTTGCACCTGGTTTGCA
CCGACgggccagaaaaaaaaaaattaggtgaagagaaatttttttttgct
ttgcaaaaaagtggcaAGGGCCctgtttataaaaaatgtttaataagaaa
attggaaaatttgaaatgaaaaaatggctGGGTCTGGCTGGATATAGACA
AAAATTGGACCATACTACTAAAGTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053513-exon-scaffold_232-1491911889:53815..55041 | TCONS_00053513-exon-scaffold_232-1491911889:53815..55041 | Clytia hemisphaerica | exon |
| TCONS_00053513-exon-scaffold_232-1510915933:53815..55041 | TCONS_00053513-exon-scaffold_232-1510915933:53815..55041 | Clytia hemisphaerica | exon |
| TCONS_00053513-exon-scaffold_232-1575043694:53815..55041 | TCONS_00053513-exon-scaffold_232-1575043694:53815..55041 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_232 | supercontig | scaffold_232:53815..55041 . |
Blast
The following BLAST results are available for this feature:
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