TCONS_00054170 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054170
Unique NameTCONS_00054170
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2703

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054170 ID=TCONS_00054170|Name=TCONS_00054170|organism=Clytia hemisphaerica|type=transcript|length=2703bp
AGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGTTTACAATATCAAA
ATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAACC
AAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCTTT
GGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaaat
ggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATCCA
AGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAGAG
GAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTACAAC
CAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAGTG
AAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAGCT
AATGGGAAGAAAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAG
CTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAG
CAAAAGCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAA
GAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGC
TCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACA
GTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGCCCCAGCTAAG
AAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGA
AGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGCTCCTGCCAAAAAGAAAG
CTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCT
GCGAAAAAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAG
TGAAGAAGAGGAACAGCCCAAAAAACaaaaagaagaaaagaaaaatttga
aacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAG
GAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGA
TGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCC
GTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCT
GATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACAC
TACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTA
AAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGT
TTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCG
AGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATG
ACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCT
CGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGA
ATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTA
AAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAA
GATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAG
CGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTC
GAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCA
AACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAA
TGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTAT
TAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGC
CCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTC
CTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGA
ACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTT
GAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAAC
TTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaa
tctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATT
GACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttt
tatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATA
ACAAtacattatttttttgtatttttttcatggTTTTCAATTGGCTTGGA
AacttttataaacaaaacttttacAGGACATAATACTTTAttatacattt
ttaatttttgtcattttttggtaaaaaagacATCGGATATACGGACAGTG
GTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCag
tacatgtttttataagcatatcttaGGCTCAGATATTgggaaaattaagc
atatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGG
ATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAATG
gag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69460..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054170 ID=TCONS_00054170|Name=TCONS_00054170|organism=Clytia hemisphaerica|type=transcript|length=11351bp|location=Sequence derived from alignment at scaffold_242:69460..80810+ (Clytia hemisphaerica)
AGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGTTTACAATATCAAA
ATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAACC
AAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCTTT
GGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaaat
ggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATCCA
AGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAGAG
GAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTATGTT
TTTTACATTAGATTAgacatttgatattttatgcCTAACATCAGAGTAAC
TGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTTAGGAAAAAGTAGC
TGTAACAAAAATGACTATGCTATCAACTTTGTTGGAATTTCACAATTTGT
AAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTGGTGTAGGCGAATA
GGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTGGAAAGATCCAGGC
GTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGCCTTTAAAAAACAG
AGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCCATGAGTCCAATCC
AAGActgtttgaaatttattttaaatttcctATTTGGAGTTACCAAAATT
CTTTATGAAAATCATTTAACACAAAActtgatcaaatttaaaatgtaaaa
gCAGCAAATATATATACAGAATAGAACAGAAAAATGAAGTGACTGCTTTT
GTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaaaaatctttgaaaa
ttgcagataaaatctttaaaaaaacacTTGATGATCAAGAGGCTGGCTAC
GTTGAATCTACAAAATTATTTGGATAGTATTGCCAAAAAATCTGACAAAT
ATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAGCGTGAGCGAGTTG
GAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAGCTCAACAAAACCA
TGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATTATTTCTGCATTTC
GATCAGCTATCGAAACATAGAACTATTTCTTTAATGTGGTTTAAATTGTT
TTTagtatttacattttttgtgaaatttctagCTTCCATTTGAAAAAGGA
TATCATTTTTTTTTGAGTCACAAAAGATACGGAAATTACTACATAGCAGT
CAGCTGTAAATAATTGGAAATAAAgttaattaaattttcaaaatgattta
gGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGA
CAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATG
GAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTACAGTACACATTgc
tatatcaattttttttaaatatatcatTTAGTAAGATTTTGCTGAGGCTT
GgcttttcttatatttttggcCCTTTAAGCCTCAAATTTTTCTTATCCTG
TTCTCATggggtgtaattgaggtataTCAAgcattatacccaatttttac
tactttgaccccaaaattagtatttttctTAAATATTCTAATGCTtcggc
gattttgagcctcaaagtgtataccttattacacaaatattactagtATT
TTATTAACACAAATTGAAAAGTTTCATGTTAATAAAAACCAGCCGTGATG
TCCTTGaagaagcaaataaaatttgtgttaattttttgcgtgttaatttc
aaggtcATTGAATACTTTCCTCGTAATATTTGTGCAATAAGGTAATTAta
ttattttctggtttacagacattatgaggaaaagttttggacaggaggat
ggaaaaaaaaataaaaataaaattaatgttttaaatttttttttagtttc
tttttaaaaatctgaattcaaaggaaataataaaataaaattttacgaaa
tttccTAAAGTatcaaatttttagatttaaagacaaaagaatAAAGTGCA
AGATGTTGTGTAGATTAGTTTTAGATACGCATCTACggataaaaacataa
aaaatgtacACATAAAGACTGATATGTGTTTATGTAAGACTGAcgtaggt
tcccacttaggttcccccatcccacttctGGTATGCCTATTTTTCTATCT
ACTCTTGAATTTTAACAATCACATAAAGGACCCTGAATAAAAGCaattac
aataaaaaatcaactgcGTAACACAAGAGTTGtataatttagtttttttt
tatttacttgcCTAAACCTGGAAAGTAAgacagaaaaaattaaattaaaa
attaaaaaaattaaaaattgatagATATCTCATATAATACTCAGTACTGG
GCAATACCTAGTTAATTTAACATATGGGGTATATTTTGgggcaaaaattt
aatttttgacaaTCTAATTTCACTTATTGGATTTTGAGGAAAGTTAGCTA
AAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAGAATCAAGCTCAGA
AGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGGTAAAA
AGTTTAAagcctttaaattgagaaaatgcaGATTACACACACAGATCTAG
GGGGTTTAAAAGATCTTTGTGAAactaaaaaatttttgggggattttttt
tcattcaacaaccaaatttagaaaattagtATTAATAACATTATTTTGGA
ATAACAGACATGAAGACAATCCCATCTTAGTCTTCTCAGGACAAATACAG
CATTTTCTAGAGCACAATGTTGGTTTTACTACACaaataatcatattttt
cttctttttttgtcaaACTGATACTTTACCTTTACTGCGTTTTTGCATAA
TCAAAGATAGAAGtgcttttttgagagaaaaaaacagttttgaaaactaa
ttttagGTTTTAGTACTGCCACTTGTAGACCTTaagtagtaagtctgcga
ccgcagtcggaggcgacccgaaggctcctctttcgatagctgtctacccg
aaggtaggggagggcgccactctttctcNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNggttttttcacctttcaaagtctctctaagggtcgg
aaaaatcagaaagttttaaattagtctctctaagggtcggaaaattcagg
aattttatgaaattttttgatttccagagaaaaagttgtaataaagtctc
tctaagggtatgacttttttcaaaaatcgaaaaaaaacattcaaagagtc
tctctaagggtcaccttttcagcaaaaatcagtctctttaagggttgGTT
TTCAGAGGTCCCATTCgtacatacccctcattcgccaaccctagtacccc
ccggatgaacgttatgtacagaaaaattttatcaCAACTAAAAAAGTTCT
AAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGT
ATCTGGatcctgaccccccccctgaccAAAAAGGGTACTTTTTGTAGTGT
TTTACCACCAAAAAGGCTGTGTTAAATATATAAAGAAAGCAGTCATAAAT
AGTAAAAAATTTATAAGTGATAACAAAACAGGCCATGTCTTAGAAAGGTA
GCGTCCATTGGTGACCAAAAAGGGTACTTTTTGTAGTGTTTTACCACCAA
AAAGGCTGTGTTTAGTGAAAGGGGCAGGATCAGTTAATAAGTGGGCGCTA
AAAAAGGGCATTAAAAATGGTCAGACAACAGAACACATAATTGTTCTGGG
TTTCGTCGCTCAAATTGAATTGATAAAGAGGGCGAAATGTTATCAAGATA
TTCTATGTTTCTTTTAAGTGCATTCTAGACTACTCTTACTTTTGCGGGCA
GTGCAAAATGTTGTGTGGATATTTCTCAATGGTGTGTGATATGCTTGTTT
ACCAGATTTGTCTTATCTAACAACTTTTTTGATTCAGCCCCATCTAAGAA
AGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAG
AGGAAGAAAAACCCAAAGCTAAAGCAAAAGGTACAAATTAATGCAGTGAT
CTCCTTTAatgtttgaaaatctctttcaTATCATGTGATGCtgcaaaatt
ttgaagattaatTTTCACATCTAGATTGGGTTATATAACAAGAAAACATG
AGTTAATACCTGCCTTATGGATCATATGGAACAGTGTTGTTGGGCCTCCT
AAAGTTTCCTGAATTGTCCTAAATTTTGAAGCCATCTAAAATCTCCTTTG
AAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTGATTGTGTTTAAAC
AGTAATAAATGCAAGCAAAtctctttgattctttttagCTCCAGCCAAGA
AAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGATGAA
GAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGATTATGTTGTTTTG
GTAAGAAACTAACTTTGACCTCTATTTCATATAATTGATCCTGGTACATC
ACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAAACTTTGGATTTAG
ACACTTAAAGTTTTGACACTCACATGACTGATTAATATTAAagtttccat
tttcattttaatcCATTAACATCTCTTTCAGCTGAAAGCCGAAAGTCTGA
GATAGCcttgtccaaattttcgtaatCTTACTAAAACATTGCATTTTTTA
GCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGACAG
TAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATAATGA
TCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAGGATAGGTTCTACA
GTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCAACATCTGATTGTA
CAGATTTTTctccaaatttaaatttctacAATTTTGAAATGAAGTTAAAG
AAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAAATAAAAAGCTTTG
CTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTTTTTTAAGCTCCAG
CTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGT
GATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTAAATAGTTTGAAAC
ATGCCAAAGATTTATGAAACTCTAccatttaaagggataatcagatgggt
tgagatttttttgtttttactaaaagtcaaaaacttctTGTAACATAATT
ACCTTTGCTTTAGAAATACTtaattaaaaagattttgagGTTTGCTTAGG
AAAATAGAAGGATTCCGCATACCAAATATCCCAAACCCATAGTGTGCAGT
GgggtctgacccccccccccccccttttNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccatttataTTT
CATTCCCCCTATATTTGCATTGGTTGGCAAAcaatatcatactccaggat
gcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATAGGGCATTTTTTCC
TAAGTTgttccactaaaaaggctgtttttaccaatattttagtaatttca
ggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGCATAAAAAATGGCC
TGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCACTTTTCATACCAT
TCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAACGTTAAAATTATT
GTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatgtttcaaattgtCA
TTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGCATGCATTTGGTGA
ACctaattttgcagaatttaatttcgcggttttagacAAACACACAAATA
TTCTCATGAATAAAGAATAACctataaaattggtctttttaggcaATAAA
GgacatattttaaacaaaacatCCTCTCAACCGCAAAATTATATTCTGCA
AAACTtccgaattttgagctgtgaaccaCTAAATGAAATCCCGTGAAAAT
ATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTTTTAATTCAGCCCC
AGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTG
ATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGGTACAAACCGA
GGAAGTCctgttttgtaatattttgataaagaaaCCAAAGTTTTCTTGTT
GTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTCAGCTGATTTTATA
TTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCT
GAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGGTAA
TTTCATTAATATCCttggtctttattttattattagtgaggttaagtaaa
tcagtaaaatcacgacgacgaacgaaaatttaaaatttctttcaaccaat
caaaagtAATTAGCTGATTTATTTTAGCCCCACGTTAAGTGATAGCTCCc
aagtacataggtccccccaaaaaagtggtgtTCTTCCAGGCCCCTCCGTT
GGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGNAAAAAA
GTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTCTTCCAGCCCCCTC
CGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGTTT
GCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCATGCTTTGTCATTAT
AAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGTGGAGGCATGCGTG
TCACATCAAATGATTCAACatgagaaaaaaaacgaaattctATCTTTTTT
AAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAGAA
GAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTAACTTAAGtgtttt
ttcagatttggtTCATTTTCACCGGCTCATTTTCATGTTGAGTGACCAAG
GCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCTGCAATGCTTGGGT
CATATCACCAGAATGTAATATTTCTAAAACTTGCCAACGATTTTAAGAAC
TTTTACGACCTTTTATTATcatagaaaaagaagaaaagaaaaatttgaaa
cgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAGGA
AGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGATG
GACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCCGT
ATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCTGA
TTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACACTA
CTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTAAA
ACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTT
CTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAG
ATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATGAC
ACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCTCG
AGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGAAT
ACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAA
GATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAAGA
TTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCG
GTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGA
GGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCAAA
CAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAATG
ATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTATTA
ACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGCCC
TCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTCCT
CTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGAAC
GTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTTGA
AGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAACTT
GCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaatc
taGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATTGA
CATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacattttta
tttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATAAC
AAtacattatttttttgtatttttttcatggTTTTCAATTGGCTTGGAAa
cttttataaacaaaacttttacAGGACATAATACTTTAttatacattttt
aatttttgtcattttttggtaaaaaagacATCGGATATACGGACAGTGGT
AAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCagta
catgtttttataagcatatcttaGGCTCAGATATTgggaaaattaagcat
atgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGGAT
AATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAATGga
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054170-exon-scaffold_242-1491911889:69460..69802TCONS_00054170-exon-scaffold_242-1491911889:69460..69802Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:69460..69802TCONS_00054170-exon-scaffold_242-1510915933:69460..69802Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:69460..69802TCONS_00054170-exon-scaffold_242-1575043694:69460..69802Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:70811..70930TCONS_00054170-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:70811..70930TCONS_00054170-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:70811..70930TCONS_00054170-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:75797..75889TCONS_00054170-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:75797..75889TCONS_00054170-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:75797..75889TCONS_00054170-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:76198..76290TCONS_00054170-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:76198..76290TCONS_00054170-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:76198..76290TCONS_00054170-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:76904..76993TCONS_00054170-exon-scaffold_242-1491911889:76904..76993Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:76904..76993TCONS_00054170-exon-scaffold_242-1510915933:76904..76993Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:76904..76993TCONS_00054170-exon-scaffold_242-1575043694:76904..76993Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:78006..78098TCONS_00054170-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:78006..78098TCONS_00054170-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:78006..78098TCONS_00054170-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:78228..78305TCONS_00054170-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:78228..78305TCONS_00054170-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:78228..78305TCONS_00054170-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:78813..78878TCONS_00054170-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:78813..78878TCONS_00054170-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:78813..78878TCONS_00054170-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1491911889:79084..80810TCONS_00054170-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1510915933:79084..80810TCONS_00054170-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054170-exon-scaffold_242-1575043694:79084..80810TCONS_00054170-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69460..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	3.98794e-10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054170 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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