Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054238 ID=TCONS_00054238|Name=TCONS_00054238|organism=Clytia hemisphaerica|type=transcript|length=2783bpRun BLAST on NCBI transcript from alignment at scaffold_242:954262..960298+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00054238 ID=TCONS_00054238|Name=TCONS_00054238|organism=Clytia hemisphaerica|type=transcript|length=6037bp|location=Sequence derived from alignment at scaffold_242:954262..960298+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00054238 vs. Swiss-Prot (Human)
Match: NOTC2 (Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3) HSP 1 Score: 566.229 bits (1458), Expect = 1.515e-175 Identity = 312/756 (41.27%), Postives = 421/756 (55.69%), Query Frame = 2 Query: 680 CKCRKGHDRTTATTCVD-INECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGIND-------------------------------------YICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGIN--DYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTC*CPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKINPC----------TSKPCENDGICSVKENNIYFCQCKDGWSGQNCKVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCVNAFTCQDLLNDHRCFCRPGWKGKNCDVNIDPCFKN-QCQNNGSCHAIGSGYRCMCPNSWIGRHCEKKA-SCTPNTCSGNGR--CLTKAGGYVECFCDKGYRGRYCEFEKDPCKSSPCVRG---VCHKSGPLDYVCVCPKGFNGLNC 2776 C C G+ C D I+EC SPC N G C++ V+ Y C C G +G NCE N ++C S+PC + +C+DGIN Y+C C PGFTG+ C +++EC S C+ C++G+N Y C C G+ G NCE + NEC S+PCQN G C + +N Y C C+ GFKG NC+ N +EC S+PC N G C D I+ YTC C +TGKNC+T + C +PC+N VC + N YTC C PG++G+RC +++EC S PC N+G+C + Y C+C PGF G +CE D+++C ++PC+N G C+DG+N ++C C PGF G C+TD+NEC S PC+N G C D +N YTCKCQ GF G +CE ++NEC S C N G CVDGIN ++C CP GF G C ++NEC S PC N+G CVDG+ Y C CP G+ GKNC+ VN C SPCKN+G C + C C GW G C+ C C++ G+C + N ++CQC G++G C+ + +EC S+PC + C D Y C C PG++G C+Y +EC + PC N TC DL+N +C C PG +G C+ NID C + C N G C GY C C + G CE C N CS G C+ Y+ C C + GR+CE D C PC+ G + P ++C CP GF+G C Sbjct: 593 CICNPGY---MGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHG-ICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVC-INAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYL-CVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARC 1342 HSP 2 Score: 554.673 bits (1428), Expect = 1.273e-171 Identity = 289/688 (42.01%), Postives = 404/688 (58.72%), Query Frame = 2 Query: 734 NECLRSPCRNGGACMNRV--SSYYCQCPKGWTGRNCETNVNECQ---SSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTC*CPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKINPCTSKPCENDGICSVKEN-NIYFCQCKDGWSGQNCKVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCVNAFTCQDLLNDHRCFCRPGWKGKNCDVNIDPCFKNQCQNNGSCHAIGSGYRCMCPNSWIGRHCEKKA-SCTPNTCSGNGRCLTKAGGYVECFCDKGYRGRYCEFEKDPCKSSPCVRGVCHKSGPLDYVCVCPKGFNGLNC 2776 + C+ +PC G C Y C CP+G+ G +C +V+EC S+PC++ CV+ + C+C G+ G CE ++NEC S CQN+ C+D I + C C PGFKG +CE +NECQS+PC NNG CVD +N + C C PGF G C+ + ++C S+PC N C+D N Y C+C GFTG CE N++ C PC ++G C DGI+ YTC C PG+ G C ++EC SSPC N+G C+D +N Y C CQPG G NCE + ++C S+PC + G+C+DGIN Y+C C PGF G+ C D++EC S+PC+ C++G+N + C C G +C + VNEC S+PC + G C G++ Y C C AG+ G NCE D NEC S+PCQN G C + +N Y C C GFKG NC+VN++ C +PC NQG C + GY+C C++ + GKNC+T + PC+ PCEN +C N Y C C GW GQ C ++ +EC S PC+N C + + Y C C PG+ G C+ + ++C ++PC N +C D +N C C PG+ G C +++ C C+N G+C + Y C C + G HCE CT ++C G C+ + C C G+ G +C E + C S PC+ G Y C CP G+ G NC Sbjct: 377 DACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPC-HHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIH-GNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSF-SCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNC 1060 HSP 3 Score: 525.783 bits (1353), Expect = 1.500e-161 Identity = 282/666 (42.34%), Postives = 389/666 (58.41%), Query Frame = 2 Query: 725 VDINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGIN--DYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTC*CPAGFKGKNCEVNVNSCKPSP----------CKNQGICQETSQGYSCTCLVGWQGKNCETKINPCTSKPCENDGICSVKENNIYFCQCKDGWSGQNCKVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSP-CVNAFTCQDLLNDHRCFCRPGWKGKNCDVNIDPCFKNQCQNNGS--CHAIGSGYRCMCPNSWIGRHCEKKASCTPNT-CSGNGRCLTKA---GGYVECFCDKGYRGRYCE 2665 +DI+EC +PCR G C+N V+ + C CP+G +C + VNEC S+PC + C G++ Y C C G+ G NCE + NEC S CQN G C + +N Y C C+ GFKG NC+ N++EC S+PC N G C D I+ YTC C + G NC+T C +PC+N C + N YTC C PG+ G+ C +++EC S PC N+G+C + Y C+C PGF G CE ++++C ++PCQN G C+DG+N ++C C PGF G C+TD+NEC S PCKN G C D +N YTCKCQ GF G +CE ++NEC S C N G CVDGIN ++C C GF G C ++NEC S PC N+G CVDG+ Y C CP G+ GKNC+T VN C SPC+NKG CV + C CP+G+ G C+V SC + C++ G+C + C C +G+ G CE +++ C S PC++ CS Y C+C G+ G NC+ E +EC + PC N CID N + C C PG G C+ N ++CA P C+N C D + + C C PG+ G+ C+ +I+ C N C + GS C + + Y C+C +++ GRHCE P C G C + G++ C C G+ G C+ Sbjct: 681 IDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGN-CTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGG-YRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFI-CRCPPGFSGARCQ 1343 HSP 4 Score: 488.034 bits (1255), Expect = 2.884e-148 Identity = 286/715 (40.00%), Postives = 400/715 (55.94%), Query Frame = 2 Query: 671 TGKCKCRKGHDRTTATTCVDINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQ-SSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQSTTCQNNGVCVD-GINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSP--CQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVC-VDGIN-DYTCKCQPGFKGKNCETDVNECQ---SSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTCQCPAGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTC*CPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKINPCTSKPCENDGICSVKENNIYFCQCKDGWSGQNCKVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCVNAFTCQDLLNDHRCFCRPGWKGKNCDVNIDPCFKNQCQNNGSCHAIGSGYRCMCPNSWIGRHCE-KKASCTPNTCSGNGRCLTKAGGYVECFCDKGYRGRYCEFEKDPCKSSPCV-RGVCHK--SGPLDYVCVCPKGFNGLNC 2776 T +C C+ G T C + CL PC NG C + + C+C G+TG+ CET+VNEC CQ+ C++ Y C+C GFTG+ C++ C + C N G C G + C C PGF+G CE N+++C + CQN GVCVDG+N Y C+C P + G C + +EC P CQN G C + Y C C G++G +C N+++C + C C+D + ++C C G G C + + C S+PC +C + +N Y C C G+KG +C DV+EC S+PC++ G CV+ + C+C G+ G CE D+NEC S PCQN C+D I +TC C PGFKG +CE ++NECQS+PC N G CVD +N + C CP GF G C+ D+++C S+PC N C+D N Y C C GF G CE N+++C P PC + G CQ+ Y+C C G+ G C +I+ C S PC NDG C + N Y C C+ G SG NC++ ++C S+PC++ C+DG N Y+CVC PG+ G+RC + +ECAS+PC TC + +N RC C G +C ++ C N C +G+C SGY+C+C W+G +CE K C N C G C GY C C KG++G C+ D C S+PC+ +G C SG Y C C + G NC Sbjct: 128 TYECTCQVGF---TGKECQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLD-DACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPC-HHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRC-IDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGI-CMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCI-HGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGY-RCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISG---YTCHCVLPYTGKNC 830 HSP 5 Score: 416.387 bits (1069), Expect = 1.829e-123 Identity = 264/728 (36.26%), Postives = 373/728 (51.24%), Query Frame = 2 Query: 752 PCRNGGACMN-RVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVD--GINDYTCKCQPGFTGKNCETNVNE--CQSTTCQNNGVC-VDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQ-SSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSPCKNNGVCVD-GINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSP--CKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCQNKGVCVDGI---------------------------------------NDYTCKCQPGFKGKNCETDVNECQ---SSPCQNKGVCVDGINDYTCQCPAGFKGKNCETDVNECQSSPCQNKGVCVDGINDYTC*CPAGFKGKNCEVNVNSCKPSPCKNQGICQETSQGYSCTCLVGWQGKNCETKINPCTSKPCENDGICSVKENNIYFCQCKDGWSGQNCKVERNECDSSPCVNAFQCIDGKNDYTCVCKPGWEGKRCQYNKNECASSPCVNAFTCQDLLNDHRCFCRPGWKGKNCDVNIDPCFKNQCQNNGSCHAIGSGYRCMCPNSWIGRHCEKKA-SCTPNTCSGNGRCLTKAGGYVECFCDKGYRGRYCEFEKDPCKSSPCVRGVCHKSGPLDYVCVCPKGFNGLNC 2776 PC N G C+ + YC+CP+G+ G C+ + + C+ + CQN CV + TC+C GFTG++C+ + + S C N G C + + Y C CQ GF GK C+ + C S PC N C N ++CKC GF G CET+ NEC CQ+ G C++ Y C+C GFTG+ C++ C SPC N G C G + C C PGF+G CE N+++C + CQN GVCVDG+N Y C+C P + G+ C DV+EC P C+N G C + Y C C G+ G +C ++++C + C C+D + Y C C G+KG +C DV+EC S+PC++ G CV+ + C+C G+ G CE D+NEC S PCQN C+D I +TC C GFKG +CE+ +N C+ +PC N G C + + C C G+ G C+ I+ C+S PC N C + N Y CQC G++G C+ + CD PC + QC DG + YTC+C PG+ G C +EC SSPC+N C DL+N ++C C+PG G NC++N D C N C +G C + Y C+C + G+ C C N C C+ G+ C C +G C + + C S+PC+ G C G Y C+C G+ G+NC Sbjct: 34 PCVNEGMCVTYHNGTGYCKCPEGFLGEYCQ-HRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQW-TDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKC-IDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-QCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCI-HGICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGF-RCICPEGPHHPSCYSQVNECLSNPCIHGNC-TGGLSGYKCLCDAGWVGINC 754 HSP 6 Score: 278.87 bits (712), Expect = 2.726e-77 Identity = 176/489 (35.99%), Postives = 236/489 (48.26%), Query Frame = 2 Query: 662 YPKTGKCKCRKGHDRTTATTCVDINECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNECQST------------------------------------------------TCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGVCVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGINDYTCKCQPGFTGKNCETNVNECQSSP-CKNNGVCVDGINDYTCKCQPGFKGKRCETNVNECQSSPCQNNGV--CVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGIN---DYTCKCQPGFKGKNCETDVNE-----------------------------CQSSPCQNKGVCVDGIND--YTCKCQPGFKGKNCE-------TDVNECQSSPCQNK---GVCVDGINDYTCQCPAG 1843 Y + CKC+ G D +INEC S C NGG C++ ++S+ C CP G+TG C +NEC S PC N CVDG+ Y C C G+TGKNC+T VN C + CQ++GVC++ N + C+C G+ G CE ++EC S+PCQ+ C D I Y C+C PG++G NCE +ECQ+ PCQN G C+D +N + C C PG G CE N+++C P C N G C+D I Y+C+C PGF G+RCE ++NEC S+PC + G C+ NDY C C+ F G++CET V+ C PC N G C N + C+C PGF G C++ + C SSPCQ+ G C Y+C+C P F G CE T C S C +K GVC + N + CQ G Sbjct: 967 YVNSYTCKCQAGFDGVHCEN--NINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVKCRKGEQCVHTASGPRCFCPSPRDCESGCASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCELYTAPPSTPPATCLSQYCADKARDGVCDEACNSHACQWDGG 1453 HSP 7 Score: 179.874 bits (455), Expect = 7.981e-46 Identity = 137/420 (32.62%), Postives = 197/420 (46.90%), Query Frame = 2 Query: 671 TGKCKCRKGHDRTTATTCVD-INECLRSPCRNGGACMNRVSSYYCQCPKGWTGRNCETNVNECQSSPCQNNRVCVDGINDYTCKCQPGFTGKNCETNVNEC-QSTTCQNNGVCVDGINDYICKCQPGFKGKNCETNVNECQSSPCQNNGV--CVDGINDYTCKCRPGFKGNNCETNFNECQSSPCQNNGACVDGIN---DYTCKCQPGFTGKNCETNVNE-----------------------------CQSSPCKNNGVCVDGIND--YTCKCQPGFKGKRCE-------TNVNECQSSPCQN---NGVCVDGINDYTCKCQPGFKGKNCETDVNECQSSPCKNKGVCVDGINDYTCKCQPGFKGKNCETDVNECQ--SSPCQNKGVCVDGINDYTCKC-----QPGFKGKNCETDVNE 1765 T C+C G+ T + C + ++EC +PC++G C + + Y C+C G+ G NCE V+ECQ+ PCQN C+D +N + C C PG G CE N+++C + C N G C+D I Y C+C PGF G+ CE ++NEC S+PC + G C+ NDY C CR F G +CET + C PC N G C N + C+C PGF+G C+++ + C SSPC++ G C Y+C+C P F G RCE T C S C + +GVC + N + C+ + G +C + ++ C + C D IN+ +C C D ECQ S C+ C D D C + G+ G +C D E Sbjct: 1132 THYCQCPLGY---TGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCGQVKCRKGEQCVHTASGPRCFCPSPRDCESGCASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCELYTAPPSTPPATCLSQYCADKARDGVCDEACNSHACQ----WDGGDCSLTMENPWAN-CSSPLPCWDYINN---QCDELCNTVECLFDNFECQGNSKTCKYDKYCADHFKDNHCDQGCNSEECGWDGLDCAADQPE 1540 HSP 8 Score: 114.39 bits (285), Expect = 1.443e-25 Identity = 76/230 (33.04%), Postives = 114/230 (49.57%), Query Frame = 2 Query: 2117 KPCENDGICSVKENNIYFCQCKDGWSGQNCKVERNECDSSPCVNAFQCIDGK--NDYTCVCKPGWEGKRCQYNKNE--CASSPCVNAFTCQDLLND-HRCFCRPGWKGKNCDVNIDPCFKNQCQNNGSCHAIGSGYRCMCPNSWIGRHCEKKAS--CTPNTCSGNGRCLTKAGGYVECFCDKGYRGRYCEFEKDPCKSSPCVR-GVCHKSGPLDYVCVCPKGFNGLNCGK 2782 +PC N+G+C N +C+C +G+ G+ C+ R+ C+ + C N C+ TC C G+ G+ CQY+ + S PC+N TC L D + C C+ G+ GK C D C + C N +C + + + C C + G+ CE + P C G CL G Y +C C +G+ G+YC+ PC SPCV G C ++G + C C GF G C + Sbjct: 33 EPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQ-HRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWT-DACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSY-QCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCER 259 The following BLAST results are available for this feature:
BLAST of TCONS_00054238 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|