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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054488 ID=TCONS_00054488|Name=TCONS_00054488|organism=Clytia hemisphaerica|type=transcript|length=933bp
tttgcagtggagacaaaaaatACTACAGCCTTTGATAGAATTGAATCATA
TAGCAGTTTCGTGCTCGTTAAAAAATAttccggagtggaatattatcata
aCTATGctataattataattttcacACGAGCGactctttgatcttagaac
atcagcaatgtgaaaaaatatttcgaaaaaaatattcttcatggTTTATA
GACGAAACCATTAAAACATGTTCATACTGTTACTGTTAACAGAGTCATTA
AAGTATTCTCTGAATGCTCTGAAAAAGGTCTCATAACTGTTTATAACTGT
CAATTATGATGATAAATTTGCCATCTGTTTTGATATGAATGAAAATAGTT
GTAGTGACGTTAATTGCTTATTGATTGGAAAGTAATTATCGCATGTGGTG
ccataattatttttttaaatgaaagtaattattGAATTGGTATGCTACTT
TTTTTTAGCTGGTAAATTATGCTTACTAAAACCaatctaatgtttttttt
atttgaagaagTTTTTCAGGCATTACATCAAATAAAACGCCTTCATGTTT
TTAACCCGGATAAAGTGCAGTACGAATCCTTTCCATttgaacaaaaaaga
aatcccttatgaaaaaatgagatgaaaaattataaaactaaTCTATCGAC
TATTCCATCAATAGAACACATAGAATGGAACTTTCTTGAATTAATAAAGA
AATGATCAGCTTTCACAATTCCTTAGCCTTGATTATGaatctctttttta
ttttctttaaagagaGTATCATGGTATTGTGATACAAACTGTACTGCTGC
ATTAGCATAGCTTGTTCTTTACAATTTGTGCAGTCATTGAAAAATCAGGT
CGTACGattatttaattaaaaaaaaacgatggACGAAAATTCTTTTGACT
AGTAACATTACGCAAGTAAAACTTTTTATGGAA Run BLAST on NCBI transcript from alignment at scaffold_242:1330093..1331025 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054488 ID=TCONS_00054488|Name=TCONS_00054488|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at scaffold_242:1330093..1331025 (Clytia hemisphaerica)
TTCCATAAAAAGTTTTACTTGCGTAATGTTACTAGTCAAAAGAATTTTCG
TccatcgtttttttttaattaaataatCGTACGACCTGATTTTTCAATGA
CTGCACAAATTGTAAAGAACAAGCTATGCTAATGCAGCAGTACAGTTTGT
ATCACAATACCATGATACtctctttaaagaaaataaaaaagagattCATA
ATCAAGGCTAAGGAATTGTGAAAGCTGATCATTTCTTTATTAATTCAAGA
AAGTTCCATTCTATGTGTTCTATTGATGGAATAGTCGATAGAttagtttt
ataatttttcatctcattttttcataagggatttcttttttgttcaaATG
GAAAGGATTCGTACTGCACTTTATCCGGGTTAAAAACATGAAGGCGTTTT
ATTTGATGTAATGCCTGAAAAActtcttcaaataaaaaaaacattagatt
GGTTTTAGTAAGCATAATTTACCAGCTAAAAAAAAGTAGCATACCAATTC
aataattactttcatttaaaaaaataattatggCACCACATGCGATAATT
ACTTTCCAATCAATAAGCAATTAACGTCACTACAACTATTTTCATTCATA
TCAAAACAGATGGCAAATTTATCATCATAATTGACAGTTATAAACAGTTA
TGAGACCTTTTTCAGAGCATTCAGAGAATACTTTAATGACTCTGTTAACA
GTAACAGTATGAACATGTTTTAATGGTTTCGTCTATAAAccatgaagaat
atttttttcgaaatattttttcacattgctgatgttctaagatcaaagag
tCGCTCGTgtgaaaattataattatagCATAGttatgataatattccact
ccggaaTATTTTTTAACGAGCACGAAACTGCTATATGATTCAATTCTATC
AAAGGCTGTAGTattttttgtctccactgcaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054488-exon-scaffold_242-1491911889:1330093..1331025 | TCONS_00054488-exon-scaffold_242-1491911889:1330093..1331025 | Clytia hemisphaerica | exon |
| TCONS_00054488-exon-scaffold_242-1510915933:1330093..1331025 | TCONS_00054488-exon-scaffold_242-1510915933:1330093..1331025 | Clytia hemisphaerica | exon |
| TCONS_00054488-exon-scaffold_242-1575043694:1330093..1331025 | TCONS_00054488-exon-scaffold_242-1575043694:1330093..1331025 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_242 | supercontig | scaffold_242:1330093..1331025 . |
Blast
The following BLAST results are available for this feature:
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