TCONS_00054271 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054271
Unique NameTCONS_00054271
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length8476

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054271 ID=TCONS_00054271|Name=TCONS_00054271|organism=Clytia hemisphaerica|type=transcript|length=8476bp
CCTCATTTGAAATTAAATGGAAGGAAATTGCACGCTTCAAAACGATCCTT
GTTGGATTTTtttaccttggaacaatagaatttccattCCTATTGGGAAT
TCGATAAATTTTCTTCTCCACTGTAGAAAGAAGCTCCtcaggggctgtga
gacagggaatGTAAAAATGGAAACGTGAAGAAAAGTCATTCCTCCGATGA
AGTTTGAAAAGCACCTTGCTTATGGACATTTGACTTGCGAAATATCagtt
aaatatttcataaagtTAGCGAAACATCCTCTAGCGGTTTGTCCTCAACT
TTAAGGAACACAAAATTGTCTTTGGGTTTTGATGGGATATTACTCCTGGT
CACTTGTCCCATATCGGCGTACGGATCACGGGAGTTTTTCCCGGCGTATT
TATGTAACGAATGCTTCTTGTCCCCTCGGTCAGGTGCTGAGGAGCCGGTC
GATGCGTACGCACTTTCGAGTTTTGAGAACCCCCCACTTGGTTTTGCATG
CTCCGTTTTCTTTTTCTGTTCCTGTGGTTTGTCCGGTTTATAATGTGTCC
CGGTACTGTCCGAAGTTAAACGACCCATCAAATAATCGGTCATATCTTCA
TTATTGACGTTACTGTTAGGATCACCATtttctgtttgttgtttgttctC
TTCGCTAGCTTTGTCACCAGACTCTTTTTCTCCTTCTTTTCCTGCTTTTG
ATTCGTCAACAGGATTAGGTTTTGACACGTCTTCAACAGGGCTTGGATTG
CTGTTCAATGAGTCAGTGGAGACCCCCTTCGAAGAGGGATCTTCTTTTGC
TTTCTCAGAGTTCGATTCTGAATTCTCAGCTTTTGACGGATCTTTATCAG
CTGTAGTATCagagttttgtttttgaagtgaTTCCCCTGTATCTCCTCCT
TCTTGTTGATTCTTTTCGTTATTTTCGATCAATTTGGAGACTTCCTTGCT
CTCCTTTTCTTTTGTGGCATTTCCTTCTTTGTTTTCCTCTTTCGCCCCCT
CCTGTTTTGCGTTCTCCCCTTCTTTAGCGGAATCACTTGAAGGATTCCCT
GAAGGGCCATTCCCTTGCTGCTGTGCATCTTGGGATCCAGTATTTCCATT
GGAGCTATCACTGTTGAAATTATTAATGGAAGAATAAGCTGCTTCGGCTT
CCTTTGCTGCCATCTTTGCTTGTTCCTCTTTAGCAagcatttcttttgtt
ttatctacttcactttcttttgcattttcttcttttactcCATCCTCCTT
GTGCTCTTCCTTTGCATTCTCTTTCGTAGCGTCTTCACTTTGTTTAGCTC
CTTGGTCTGTGGACCCCTCTTTTGGACCTTGGTCAGTGGATCCCTCCTTT
GGTCCCTGGTCTGTTGACTCCTCTTTTGGACCCTGGTCTGAAGAACCTTC
TTGTTTCGCACCTTGATCGCTTGATCCACTCTCTTGTTTCATAGCCTCAC
CATTAGAAccttcattttgtttttgtccTTCTTCACTAGAGTTTTGCTTG
GGAGCATCAGAATTATCCTGTGTTGGCCCTTGTTCGGCAGTTGCTTGATC
TTTTGATTCATCCTGTTTTGGAGAATCTTCTTTGGACCCTTCTTCTTTAG
AAAATTCTTTCGAAGATTCTTGTTTCGAGTCGTTCTCATTATGCGCTTCC
TGTGCAGCTTTTTGGTCATTGCCTTTCGATTGCCCGTCTTTTGGACCCTC
TTGTTGCCCTTTCTCTTCATTCGCACTTTCGCTTTTTGTGTTTTCCTCTT
TAGGGTTTTCCTGCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAA
GTGTCTTCTTTAGGGTTTTCCTGCTTCGAAGCGTCTTCTTTGGGGTTTTC
CTGCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAGGCGTCTTCTT
TGGGGCTTTCCTGTTTCGAAGTGTCTTCTTTAGGGCTTTCCTGCTTCGAA
GCATCTTCTTTATTCTCCTCCTTTGATCCTCCCTCTTTGGAAGAGTTCTC
CTTATTCTCCTCCTGGGTGTTTCCTTGAGATTCAGGTGTCTTATCATCCA
ACTTGGACCCACCATCGCTCTGTCCTTGCATCGCATTCTTCAAATTATCA
TCTTCATATTCAGCGCATTCAATTTCCTGACGTTTGGAATCTTCACTCGG
TGTTCCTATCATCACATATGGATCCTTAAGAGCCTTCGGGATTTGAACTT
CCTTATGGCGCTTTTTACATTTGCTTTTGTCAATTTGACTTTTTCTTGAA
GGATGCTTCattgattttcttttagaaGATAAAGAAGACCTTTTCTTACC
ACCGATATCACTATAAAGGCGTTTCACTTCTTTGCCGACGTTTTTAGATA
ATGAATCCTCGTCTTCTTCCACGGCAGGATGAACTTTCGATTTCTCAGTA
GCAATGGCCTTCTCGAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCT
TGGTGTAGCTTTGACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTT
TAGCTTTCAGTTTTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTAT
GGATCACTGGTGTCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAA
CTCGCTTATACCATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCG
AGGCCCTAGCTTCACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTA
GCTGTCTTTTCATGTCGAGCTTCGTTTTGAGTCAACCCAACGGCTGTTCC
GAGATCTGCGTAAGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGT
ATCGTTTGTGGTTTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATG
AAAAGATAAGGATCCTTTAAGAGCTTTTGCCTTGCTTTCTCAATGTNGGC
CTTCTCAAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCTTGGTGTAG
CTTTGACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTTTAGCTTTC
AGTTTTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTATGGATCACT
GGTGTCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAACTCGCTTA
TACCATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCGAGGCCCTA
GCTTCACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTAGCTGTCTT
TTCGTGTCGAGCTTCGTTTTGAGTCAACCCAACGGATGTTCCGAGATCTG
CGTAAGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGTATCGTTTG
TGGTTTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATGAAAAGATA
AGGATCCTTTAAGAGCTTTTGCCTTGCTTTCTCAatgtttgtttgatttg
aagCGACATCACTGCGCTTCTGGTCGTTAACAGCCGATCCTAACAAAACA
TATGGATCCTTGATCGTATTTTTATTGCCAACAACCTTAGTTTCGTTTGA
GGCAACATCGCTACGTTTTTGATCATCAACAGTGGACCCTATCATAACAT
AAGGATCTTTAATAATATTCTTAttgttggctgatttagtttCGTTTGAG
GCAACATCGCTCCGTTTTTGGTCATTTACGGCCGAACCAATAAAAACATA
AGGATCATTgatgatgttcttattttcagcggCCTTCGTTTGGTTTGACT
GTTGAGTTTCACTGCGTCTTCGACTATCCACTGTGGAGCCAATTAAAACA
TAAGGGTCCTTAATGACGTTGCCTGCTGATTTCGTTTGGTTTGCTGCAAC
CCCGCTGCGTTTTCGATCATCAGCTAAGACAGATCCGACTAAAGTATCAG
GTTTATAGTATTTCTTATCTTCCAAATCGTCAGGTTGTGTCAACTTATGT
TGTGGGCTAATTCCTTTGGTGGTGGCTTTATCGACACGATCTCTCTTGCG
GCCGATATCAGCGTACGGGTCaattttgactgcttttacatTCGTGGACT
TTTTGCTACCCTTTGATGGGTGTTTATCCAtactatttctttttttaccg
ATGTCAGAGTAGGGGTCCTTACCGTTGATTTGATTACTGACTGTTTCTTT
CGAATCTTTTGATTCCGGTGATTTTAGTTTCATCAACAGAGGGAAGATTC
CTTGGAAAATACTCGGTTCAACTTGATCTCTACCAGCATTGGAAACTTCA
GCCGGATGTTGAGGAAGGTAGACACGTTTATGGGCCTTTTTCGTGATTAT
GTGTTTCTTAGAAGCAGGGTGGTGGTGATTCTTCTTGCTAATTGTGTGTC
TTTTAACAGACTTCCTCTTCTTGATGAAATGTCTTTTGACGTGTTTCGCT
TTCTTCACCACGGATCTTTTAGTAGTTTTCGTTCTCTTGTTCGTATGTGG
TTTGGTAGGCTTAGCTCGTTTGCTACCCAAATCAGAGTAAGGATCACCAT
AGTGGGTCAGTGGTTTAGATTCCTTTACTTTTGATGGATTCACAAAGTTG
CAATCATCATCTCTCTTGGAAGCTTCATTTCCAATCATTTCATAAGGCTC
ACTGCAACTTAAAAACCGTTTCGTGATTTCTGCTGATCGCCTGCTACGTT
TATTGATCTTGGCTTTCAGTGGAGTTTTAGTCGGGTCTTGGCTTCGTTTG
GTCGCGACAGTTGATGTGACGCTTTCTCCGACATCTAAATAAGGATCACG
TCCCTGGTTTACACTTTTTTGGGGTGCTTTAAATTCATGCGTTTTAGAAG
CATCATTATTCTTGGAGCTTTCTTGTTTAGCTCGTTTGGTAGGGTTCGGT
GAGGAGGCCCCTATCTCCAGGTAAGGATCCGAATTTTTCGCATTGGTTTT
CACCTTGGATGCAATCGCTTGCTGCCCAAATACTGGTAGTGAGCCTTTGG
AGGTCTCTTCCGATTGGGTAGAATTTGACTTTGGAGCAGAATTTGTCTGT
TCTTCGCTAGCCTCGGGAAGTTTATGTCGTAGATTAGCATAAGGGTCGGA
AGAAGGGTCTTGTGAGAGAGTTTGAGTTGAGTCGCCTTTTGAAAGTGTTT
GACTTGAAACACCATTCATTTCATTCTTGATTTGTGCGTTCGATTTATTG
AGAGCACGAAGCAATTCTTCAGTCTTGGCAAGTGCTTGGTCAACTTCTCC
TTCTTCGTCTTGTCCTTTCAAATTTGCTTGATTATCCTCTTTCTTCTTCT
TGAGAACTTTCTCGTTTCCCTCCTTCAATTTGTCACTCAATTCTTTTACT
CTCTCCATAATCTTTGCTCCTTTCTCTTCTTCACCCTCTCCTTTATCCTC
CTCCTTCTCTTTATTTGATTCACTCGTTTCATCCTCGTTCGTCTTCTTCA
GTGAATCTCCTTCTTCATGATTCGCTTTTTTCAAAACACTATCAGCCAAT
GAAACATCTTTTTCCAAACGTGGATCCATGTGTAAAGTTGCGTTGCTACC
AGACACTGGACCCGCCATGTTTTGAGTTACATTTGATACAGTTTTGTCAG
TCACCGATTTATCAACAACATTCGACTTGCTGTCACTGTCACCCTTCTCA
CCCCAGAACTTCGAGCTCTCTCCAACATCTGCGTAAGGATCACTAAATTG
ATGTTCAGATTTCGTAGACGCTATCTGATGTGTGTCAAACGATTCTTTAA
GTTGCTTTTGCGCTTCAAGTGCAAGTGATGACTCTGGTTGAGTGTTGCCC
TCAATGTTCGAATTCTCTGCATTCTTACCTAGCAAGTGAACTTGTTTCTG
ATTAGTTGCTCCCTCTTTTAGTTCTTCTTTACTCTCCTTAGAAGTTTCTT
CGGAAAGTTCAAACTCCTTAGCTTTCATCATTTCTTTACCACTAATCTTC
GATTGCACATCGTGATCACCCTCTTCGCCATCAGATTTGGCAAACTCCTt
cgatttttctttcttctttttcgaaTCATCTTTATCTTCGTCATCTTTTG
GCGGCTTCTGATCACCTGGTATTATTTTTGGAGGTAGAACTTTACCAATC
GACTTATAAGGATCTTTTGCGTACGATTTCACACCTTGTATGTTTTCCAT
AGACGTTGGCAATTTCGCTTTCTCTGCAATCTTCTTGAAATCAGTAACCT
GGACTTGTTCTTTCTTTTCTGCGTCATCTCTCGAATAAACACTTGTTTCC
TGGTTTCCATCAGCACCTGGACTGGTTTCTTCCAGCTTACGCTTACTTCC
TTTGACAGGCCGTGCGTTGATGCTTTTCAAGACAATGCTCTTTGAGACAg
ctttaaatttcgatttaagACCAGCTTTCGATACAATTCCACTCTTCAAA
GAAGCTTTAATACCTGTTGGTGCTATTCTGGTCTTTGTTATCGAAGCTCT
ACTTTTCACAGTCGTAATTTTGTTCTTTCTACGGCTCAGCTTTGCCATTC
TGCTTCGTTTCTCATTCTTGACGTTTTTCTTGTGATTCTTTTTAGAGAAT
GTGGAGCCTTTCAATGGTTCACTTGGTGCACTACCTATGTCCGAAAAAGG
ATCTCTTTTATGTCCGGTAGTTTTCTTCGGTCTACCAATTACCTTTTGTC
GCTTTTGCTTCTTTGAGTGTTTGGGCATGCGGCTCCGTTTACTCTTCTTG
TTTTTACGAGACACCTTTCCTCTTTTCGAGACTTGCTTACGtgatgtttt
tctttccctctttgCGCCTTTCTTTTGATTAACTTTGGTTGGTAGCCTGT
GTCTCTTGTTCCCGATATCAGCGAAAGGGTCTTTCTTAATAGTGGCATGA
ATTTTATTGatctttttcaaaggttttaGAGACTTGGTTTGAGCTTTATC
AAGTTTACTTGGTGATTTTGAATGGACTTCGCTTCCATAACCAATATCTG
CGAAAGGGTCACCAGACTTTTTGTAACCTTTGCTTGTCTGTGTTCGCTTG
GATGGCATCCCAGAGGTGTTTCCTACATCCGCATAAGGGTCTCTTTTGTA
GCCTCCTTTAGTTGAAGGCCTCTTATTTGTATGTGTGCGTTTTGTAGGGA
CATCAGGAGCGCTTCCCAGATCAGCATAGGGATCTCTCTTAGTACTCGTG
CTAGGCCCAGGTTTTTTATGGGTTTCTTCACGCTTGACTGGCGTGCTAGG
TGCACTTCCTACATCTGCGTACGGATCTCGTTTATAAGAACCTTTCTTGG
AATACGTTTGACTTCGAGCCACGGCAGCTCCCATATCTCCATAAGGGTCG
CGCCCATTATCGAAAGTTTGAAGAGTTGGTTTCTTTGGCTGTGTGCTTGA
CTCCACAGCACTATCAATATTCGGCATGTTAGCTAGAAATCTGAAAGGTT
TCATTTCGAACAAACGTTTCCTGGTTTCAGGGTTTATCTTCGCCAACGCT
TCTTTGAATTTAGGTAACGAATCTAACATCATGGTGTGAGGGCTGCTTGG
AGCTTCACGCGGTGCCACATTATTGGCTGCGGTGATCTGTTCCAAAGCTG
ACGCTGTCGAATCGACTGTGGACATTGAAGGGGTATGGGTATGAGAGATT
AATGACATTCCACCTGTGCCTCCGTGCGAGGCATCATCGAAAAGACCCCT
CTTAGTACCTGTTTTGTTAGAGACAGCCCTGATCGATCTTTTCAATCCAG
CAGATCCCATCGTTGCATAAGGATCTTTGGCCAGTTTCTCATACGATTCC
TTTTTGGTCATATATTTGTAGGTATCTTCCTCCTTATTTGGTAGGATAGC
TCCTACTTCGACCTCATCAGTTGCCCGACGCCTTCTTCGGCGGGCTGGTA
AACCACCTACATCAGCATATGGGTCGTTAACAACCATCTTGGTTTTGGTA
GCTTCCTCTTTTTGCTCCTGATGGTGTttctgatgatgatgatgtcTTTT
CTGGCCGATGTCTGAATAAGGATCTTTCAATCGATTCAATTGCAACATTg
cttcttttgtttctttcttcaaTTTATCCAAAGTGTTTTCGTATTCAAGG
ATCTTTGGTTTCAAACTTGATTCAGTCATCTCTGGTGATTGTTGTTGAGC
TTCAGCTGTTGATGTGGATGTCATTGCTCTTGTTGCTGCGGACCCTTGGT
TACCAGAGAGGATAGAAGTCAATTCTTTAGGCAAACTGACCACAATTCTC
ATTCTTTTTCCACGTTGTTCGATTCTAGATGGTGTTAAATGAATTTCTTT
ACCACGGTGGGGCGTTTCCAAGGTGCGCCGGCGGAGATCTGCATACGCTG
CTTGAAGCTTGTTTTGGTCTTCCTTAGTCATTGGTTCGTCCTTAAAGATA
CGATCTGCGATAGTCACTGCAATAGCAGGGTTGTTGGTTATCGCAACAGC
TCTGGAGTTTGATCGTTTACCATCTGGAGGCTTCAAATCAAtcgtgattg
gttctttcagcTTGGCTAACGGTCCTTTGGGatttaaagtaattttgagT
GGAACCCTGGGTAATTTACCGAACAGCTCCACAATAGTACTTGGTTGTTG
TGTTTGACCGACTTCGATTGATTCTC

transcript from alignment at scaffold_242:1538557..1547626+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054271 ID=TCONS_00054271|Name=TCONS_00054271|organism=Clytia hemisphaerica|type=transcript|length=9070bp|location=Sequence derived from alignment at scaffold_242:1538557..1547626+ (Clytia hemisphaerica)
CCTCATTTGAAATTAAATGGAAGGAAATTGCACGCTTCAAAACGATCCTT GTTGGATTTTtttaccttggaacaatagaatttccattCCTATTGGGAAT TCGATAAATTTTCTTCTCCACTGTAGAAAGAAGCTCCtcaggggctgtga gacagggaatGTAAAAATGGAAACGTGAAGAAAAGTCATTCCTCCGATGA AGTTTGAAAAGCACCTTGCTTATGGACATTTGACTTGCGAAATATCagtt aaatatttcataaagtTAGCGAAACATCCTCTAGCGGTTTGTCCTCAACT TTAAGGAACACAAAATTGTCTTTGGGTTTTGATGGGATATTACTCCTGGT CACTTGTCCCATATCGGCGTACGGATCACGGGAGTTTTTCCCGGCGTATT TATGTAACGAATGCTTCTTGTCCCCTCGGTCAGGTGCTGAGGAGCCGGTC GATGCGTACGCACTTTCGAGTTTTGAGAACCCCCCACTTGGTTTTGCATG CTCCGTTTTCTTTTTCTGTTCCTGTGGTTTGTCCGGTTTATAATGTGTCC CGGTACTGTCCGAAGTTAAACGACCCATCAAATAATCGGTCATATCTTCA TTATTGACGTTACTGTTAGGATCACCATtttctgtttgttgtttgttctC TTCGCTAGCTTTGTCACCAGACTCTTTTTCTCCTTCTTTTCCTGCTTTTG ATTCGTCAACAGGATTAGGTTTTGACACGTCTTCAACAGGGCTTGGATTG CTGTTCAATGAGTCAGTGGAGACCCCCTTCGAAGAGGGATCTTCTTTTGC TTTCTCAGAGTTCGATTCTGAATTCTCAGCTTTTGACGGATCTTTATCAG CTGTAGTATCagagttttgtttttgaagtgaTTCCCCTGTATCTCCTCCT TCTTGTTGATTCTTTTCGTTATTTTCGATCAATTTGGAGACTTCCTTGCT CTCCTTTTCTTTTGTGGCATTTCCTTCTTTGTTTTCCTCTTTCGCCCCCT CCTGTTTTGCGTTCTCCCCTTCTTTAGCGGAATCACTTGAAGGATTCCCT GAAGGGCCATTCCCTTGCTGCTGTGCATCTTGGGATCCAGTATTTCCATT GGAGCTATCACTGTTGAAATTATTAATGGAAGAATAAGCTGCTTCGGCTT CCTTTGCTGCCATCTTTGCTTGTTCCTCTTTAGCAagcatttcttttgtt ttatctacttcactttcttttgcattttcttcttttactcCATCCTCCTT GTGCTCTTCCTTTGCATTCTCTTTCGTAGCGTCTTCACTTTGTTTAGCTC CTTGGTCTGTGGACCCCTCTTTTGGACCTTGGTCAGTGGATCCCTCCTTT GGTCCCTGGTCTGTTGACTCCTCTTTTGGACCCTGGTCTGAAGAACCTTC TTGTTTCGCACCTTGATCGCTTGATCCACTCTCTTGTTTCATAGCCTCAC CATTAGAAccttcattttgtttttgtccTTCTTCACTAGAGTTTTGCTTG GGAGCATCAGAATTATCCTGTGTTGGCCCTTGTTCGGCAGTTGCTTGATC TTTTGATTCATCCTGTTTTGGAGAATCTTCTTTGGACCCTTCTTCTTTAG AAAATTCTTTCGAAGATTCTTGTTTCGAGTCGTTCTCATTATGCGCTTCC TGTGCAGCTTTTTGGTCATTGCCTTTCGATTGCCCGTCTTTTGGACCCTC TTGTTGCCCTTTCTCTTCATTCGCACTTTCGCTTTTTGTGTTTTCCTCTT TAGGGTTTTCCTGCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAA GTGTCTTCTTTAGGGTTTTCCTGCTTCGAAGCGTCTTCTTTGGGGTTTTC CTGCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAGGCGTCTTCTT TGGGGCTTTCCTGTTTCGAAGTGTCTTCTTTAGGGCTTTCCTGCTTCGAA GCATCTTCTTTATTCTCCTCCTTTGATCCTCCCTCTTTGGAAGAGTTCTC CTTATTCTCCTCCTGGGTGTTTCCTTGAGATTCAGGTGTCTTATCATCCA ACTTGGACCCACCATCGCTCTGTCCTTGCATCGCATTCTTCAAATTATCA TCTTCATATTCAGCGCATTCAATTTCCTGACGTTTGGAATCTTCACTCGG TGTTCCTATCATCACATATGGATCCTTAAGAGCCTTCGGGATTTGAACTT CCTTATGGCGCTTTTTACATTTGCTTTTGTCAATTTGACTTTTTCTTGAA GGATGCTTCattgattttcttttagaaGATAAAGAAGACCTTTTCTTACC ACCGATATCACTATAAAGGCGTTTCACTTCTTTGCCGACGTTTTTAGATA ATGAATCCTCGTCTTCTTCCACGGCAGGATGAACTTTCGATTTCTCAGTA GCAATGGCCTTCTCGAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCT TGGTGTAGCTTTGACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTT TAGCTTTCAGTTTTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTAT GGATCACTGGTGTCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAA CTCGCTTATACCATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCG AGGCCCTAGCTTCACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTA GCTGTCTTTTCATGTCGAGCTTCGTTTTGAGTCAACCCAACGGCTGTTCC GAGATCTGCGTAAGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGT ATCGTTTGTGGTTTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATG AAAAGATAAGGATCCTTTAAGAGCTTTTGCCTTGCTTTCTCAATGTNGGC CTTCTCAAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCTTGGTGTAG CTTTGACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTTTAGCTTTC AGTTTTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTATGGATCACT GGTGTCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAACTCGCTTA TACCATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCGAGGCCCTA GCTTCACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTAGCTGTCTT TTCGTGTCGAGCTTCGTTTTGAGTCAACCCAACGGATGTTCCGAGATCTG CGTAAGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGTATCGTTTG TGGTTTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATGAAAAGATA AGGATCCTTTAAGAGCTTTTGCCTTGCTTTCTCAatgtttgtttgatttg aagCGACATCACTGCGCTTCTGGTCGTTAACAGCCGATCCTAACAAAACA TATGGATCCTTGATCGTATTTTTATTGCCAACAACCTTAGTTTCGTTTGA GGCAACATCGCTACGTTTTTGATCATCAACAGTGGACCCTATCATAACAT AAGGATCTTTAATAATATTCTTAttgttggctgatttagtttCGTTTGAG GCAACATCGCTCCGTTTTTGGTCATTTACGGCCGAACCAATAAAAACATA GGGATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACG CGACGTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAG GGATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGC GACGTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGG GATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCG ACGTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGG ATCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGA CGTCGCTACGTTTTTGGTCGTCAACAGCTGAACCAATCAAAACATAAGGA TCCTTGATGATATTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTAC TTCGCTCCGTTTTTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGAT CCTTGATGATATTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTACT TCGCTCCGTTTTTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGATC ATTgatgatgttcttattttcagcggCCTTCGTTTGGTTTGACTGTTGAG TTTCACTGCGTCTTCGACTATCCACTGTGGAGCCAATTAAAACATAAGGG TCCTTAATGACGTTGCCTGCTGATTTCGTTTGGTTTGCTGCAACCCCGCT GCGTTTTCGATCATCAGCTAAGACAGATCCGACTAAAGTATCAGGTTTAT AGTATTTCTTATCTTCCAAATCGTCAGGTTGTGTCAACTTATGTTGTGGG CTAATTCCTTTGGTGGTGGCTTTATCGACACGATCTCTCTTGCGGCCGAT ATCAGCGTACGGGTCaattttgactgcttttacatTCGTGGACTTTTTGC TACCCTTTGATGGGTGTTTATCCAtactatttctttttttaccgATGTCA GAGTAGGGGTCCTTACCGTTGATTTGATTACTGACTGTTTCTTTCGAATC TTTTGATTCCGGTGATTTTAGTTTCATCAACAGAGGGAAGATTCCTTGGA AAATACTCGGTTCAACTTGATCTCTACCAGCATTGGAAACTTCAGCCGGA TGTTGAGGAAGGTAGACACGTTTATGGGCCTTTTTCGTGATTATGTGTTT CTTAGAAGCAGGGTGGTGGTGATTCTTCTTGCTAATTGTGTGTCTTTTAA CAGACTTCCTCTTCTTGATGAAATGTCTTTTGACGTGTTTCGCTTTCTTC ACCACGGATCTTTTAGTAGTTTTCGTTCTCTTGTTCGTATGTGGTTTGGT AGGCTTAGCTCGTTTGCTACCCAAATCAGAGTAAGGATCACCATAGTGGG TCAGTGGTTTAGATTCCTTTACTTTTGATGGATTCACAAAGTTGCAATCA TCATCTCTCTTGGAAGCTTCATTTCCAATCATTTCATAAGGCTCACTGCA ACTTAAAAACCGTTTCGTGATTTCTGCTGATCGCCTGCTACGTTTATTGA TCTTGGCTTTCAGTGGAGTTTTAGTCGGGTCTTGGCTTCGTTTGGTCGCG ACAGTTGATGTGACGCTTTCTCCGACATCTAAATAAGGATCACGTCCCTG GTTTACACTTTTTTGGGGTGCTTTAAATTCATGCGTTTTAGAAGCATCAT TATTCTTGGAGCTTTCTTGTTTAGCTCGTTTGGTAGGGTTCGGTGAGGAG GCCCCTATCTCCAGGTAAGGATCCGAATTTTTCGCATTGGTTTTCACCTT GGATGCAATCGCTTGCTGCCCAAATACTGGTAGTGAGCCTTTGGAGGTCT CTTCCGATTGGGTAGAATTTGACTTTGGAGCAGAATTTGTCTGTTCTTCG CTAGCCTCGGGAAGTTTATGTCGTAGATTAGCATAAGGGTCGGAAGAAGG GTCTTGTGAGAGAGTTTGAGTTGAGTCGCCTTTTGAAAGTGTTTGACTTG AAACACCATTCATTTCATTCTTGATTTGTGCGTTCGATTTATTGAGAGCA CGAAGCAATTCTTCAGTCTTGGCAAGTGCTTGGTCAACTTCTCCTTCTTC GTCTTGTCCTTTCAAATTTGCTTGATTATCCTCTTTCTTCTTCTTGAGAA CTTTCTCGTTTCCCTCCTTCAATTTGTCACTCAATTCTTTTACTCTCTCC ATAATCTTTGCTCCTTTCTCTTCTTCACCCTCTCCTTTATCCTCCTCCTT CTCTTTATTTGATTCACTCGTTTCATCCTCGTTCGTCTTCTTCAGTGAAT CTCCTTCTTCATGATTCGCTTTTTTCAAAACACTATCAGCCAATGAAACA TCTTTTTCCAAACGTGGATCCATGTGTAAAGTTGCGTTGCTACCAGACAC TGGACCCGCCATGTTTTGAGTTACATTTGATACAGTTTTGTCAGTCACCG ATTTATCAACAACATTCGACTTGCTGTCACTGTCACCCTTCTCACCCCAG AACTTCGAGCTCTCTCCAACATCTGCGTAAGGATCACTAAATTGATGTTC AGATTTCGTAGACGCTATCTGATGTGTGTCAAACGATTCTTTAAGTTGCT TTTGCGCTTCAAGTGCAAGTGATGACTCTGGTTGAGTGTTGCCCTCAATG TTCGAATTCTCTGCATTCTTACCTAGCAAGTGAACTTGTTTCTGATTAGT TGCTCCCTCTTTTAGTTCTTCTTTACTCTCCTTAGAAGTTTCTTCGGAAA GTTCAAACTCCTTAGCTTTCATCATTTCTTTACCACTAATCTTCGATTGC ACATCGTGATCACCCTCTTCGCCATCAGATTTGGCAAACTCCTtcgattt ttctttcttctttttcgaaTCATCTTTATCTTCGTCATCTTTTGGCGGCT TCTGATCACCTGGTATTATTTTTGGAGGTAGAACTTTACCAATCGACTTA TAAGGATCTTTTGCGTACGATTTCACACCTTGTATGTTTTCCATAGACGT TGGCAATTTCGCTTTCTCTGCAATCTTCTTGAAATCAGTAACCTGGACTT GTTCTTTCTTTTCTGCGTCATCTCTCGAATAAACACTTGTTTCCTGGTTT CCATCAGCACCTGGACTGGTTTCTTCCAGCTTACGCTTACTTCCTTTGAC AGGCCGTGCGTTGATGCTTTTCAAGACAATGCTCTTTGAGACAgctttaa atttcgatttaagACCAGCTTTCGATACAATTCCACTCTTCAAAGAAGCT TTAATACCTGTTGGTGCTATTCTGGTCTTTGTTATCGAAGCTCTACTTTT CACAGTCGTAATTTTGTTCTTTCTACGGCTCAGCTTTGCCATTCTGCTTC GTTTCTCATTCTTGACGTTTTTCTTGTGATTCTTTTTAGAGAATGTGGAG CCTTTCAATGGTTCACTTGGTGCACTACCTATGTCCGAAAAAGGATCTCT TTTATGTCCGGTAGTTTTCTTCGGTCTACCAATTACCTTTTGTCGCTTTT GCTTCTTTGAGTGTTTGGGCATGCGGCTCCGTTTACTCTTCTTGTTTTTA CGAGACACCTTTCCTCTTTTCGAGACTTGCTTACGtgatgtttttctttc cctctttgCGCCTTTCTTTTGATTAACTTTGGTTGGTAGCCTGTGTCTCT TGTTCCCGATATCAGCGAAAGGGTCTTTCTTAATAGTGGCATGAATTTTA TTGatctttttcaaaggttttaGAGACTTGGTTTGAGCTTTATCAAGTTT ACTTGGTGATTTTGAATGGACTTCGCTTCCATAACCAATATCTGCGAAAG GGTCACCAGACTTTTTGTAACCTTTGCTTGTCTGTGTTCGCTTGGATGGC ATCCCAGAGGTGTTTCCTACATCCGCATAAGGGTCTCTTTTGTAGCCTCC TTTAGTTGAAGGCCTCTTATTTGTATGTGTGCGTTTTGTAGGGACATCAG GAGCGCTTCCCAGATCAGCATAGGGATCTCTCTTAGTACTCGTGCTAGGC CCAGGTTTTTTATGGGTTTCTTCACGCTTGACTGGCGTGCTAGGTGCACT TCCTACATCTGCGTACGGATCTCGTTTATAAGAACCTTTCTTGGAATACG TTTGACTTCGAGCCACGGCAGCTCCCATATCTCCATAAGGGTCGCGCCCA TTATCGAAAGTTTGAAGAGTTGGTTTCTTTGGCTGTGTGCTTGACTCCAC AGCACTATCAATATTCGGCATGTTAGCTAGAAATCTGAAAGGTTTCATTT CGAACAAACGTTTCCTGGTTTCAGGGTTTATCTTCGCCAACGCTTCTTTG AATTTAGGTAACGAATCTAACATCATGGTGTGAGGGCTGCTTGGAGCTTC ACGCGGTGCCACATTATTGGCTGCGGTGATCTGTTCCAAAGCTGACGCTG TCGAATCGACTGTGGACATTGAAGGGGTATGGGTATGAGAGATTAATGAC ATTCCACCTGTGCCTCCGTGCGAGGCATCATCGAAAAGACCCCTCTTAGT ACCTGTTTTGTTAGAGACAGCCCTGATCGATCTTTTCAATCCAGCAGATC CCATCGTTGCATAAGGATCTTTGGCCAGTTTCTCATACGATTCCTTTTTG GTCATATATTTGTAGGTATCTTCCTCCTTATTTGGTAGGATAGCTCCTAC TTCGACCTCATCAGTTGCCCGACGCCTTCTTCGGCGGGCTGGTAAACCAC CTACATCAGCATATGGGTCGTTAACAACCATCTTGGTTTTGGTAGCTTCC TCTTTTTGCTCCTGATGGTGTttctgatgatgatgatgtcTTTTCTGGCC GATGTCTGAATAAGGATCTTTCAATCGATTCAATTGCAACATTgcttctt ttgtttctttcttcaaTTTATCCAAAGTGTTTTCGTATTCAAGGATCTTT GGTTTCAAACTTGATTCAGTCATCTCTGGTGATTGTTGTTGAGCTTCAGC TGTTGATGTGGATGTCATTGCTCTTGTTGCTGCGGACCCTTGGTTACCAG AGAGGATAGAAGTCAATTCTTTAGGCAAACTGACCACAATTCTCATTCTT TTTCCACGTTGTTCGATTCTAGATGGTGTTAAATGAATTTCTTTACCACG GTGGGGCGTTTCCAAGGTGCGCCGGCGGAGATCTGCATACGCTGCTTGAA GCTTGTTTTGGTCTTCCTTAGTCATTGGTTCGTCCTTAAAGATACGATCT GCGATAGTCACTGCAATAGCAGGGTTGTTGGTTATCGCAACAGCTCTGGA GTTTGATCGTTTACCATCTGGAGGCTTCAAATCAAtcgtgattggttctt tcagcTTGGCTAACGGTCCTTTGGGatttaaagtaattttgagTGGAACC CTGGGTAATTTACCGAACAGCTCCACAATAGTACTTGGTTGTTGTGTTTG ACCGACTTCGATTGATTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034233XLOC_034233Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054271-exon-scaffold_242-1491911889:1538557..1542203TCONS_00054271-exon-scaffold_242-1491911889:1538557..1542203Clytia hemisphaericaexon
TCONS_00054271-exon-scaffold_242-1510915933:1538557..1542203TCONS_00054271-exon-scaffold_242-1510915933:1538557..1542203Clytia hemisphaericaexon
TCONS_00054271-exon-scaffold_242-1575043694:1538557..1542203TCONS_00054271-exon-scaffold_242-1575043694:1538557..1542203Clytia hemisphaericaexon
TCONS_00054271-exon-scaffold_242-1491911889:1542798..1547626TCONS_00054271-exon-scaffold_242-1491911889:1542798..1547626Clytia hemisphaericaexon
TCONS_00054271-exon-scaffold_242-1510915933:1542798..1547626TCONS_00054271-exon-scaffold_242-1510915933:1542798..1547626Clytia hemisphaericaexon
TCONS_00054271-exon-scaffold_242-1575043694:1542798..1547626TCONS_00054271-exon-scaffold_242-1575043694:1542798..1547626Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1538557..1547626 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0470527 0.0455887 0 0.0380305 0 0.0182929 0.10108 0.217608 0 0 0.0992861 0.057408 0.415549 0.247251 0.176711 0.103446 0.187919 0.0791637 0 0 0.239355 0.120511 0.0149405 0.112757 0.0416235 0.178613 0 0 0.0381057 0.0339708
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054271 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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