TCONS_00054288 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054288
Unique NameTCONS_00054288
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3431

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054288 ID=TCONS_00054288|Name=TCONS_00054288|organism=Clytia hemisphaerica|type=transcript|length=3431bp
CAACGAAGTATTAACCTATTGACTTGAATTCTTGTCTCAGAAAAAAGAAC
ACTAAAAATTATCAAACATATCAGCATTTATACTATGAAGCTTAAAGTAT
AGAATGATCTAGCTTTGCCTTTATTGTCATATTGTGGTGAGCTAAAGGTT
CAAACATCAGAGCAAATCATTCAAACACATTGGAGTTGCAATGGAAACGA
ctggaaaaaaatcaaactagatatacaaaaaacttgattttggTCATTAC
CGAAGTCTGATCACTCGGACGAAATAAAGCGAGTTAACATTTTCGGACAC
CTTGGATCGGTAGATTTCACCAACAATTATTAAATGAGATTCATGGAAGG
TTTAGGATCTCTTATCTCTCCATCACGAAATATTTACGATGCCGCCGGAT
TGGGTGAGAAAGCCCGCATGAACCATCCACGGTTGAGGACACGTCGTAAA
ACATGGGCGGGTTTCCTTGACAACCGGCCACAAAGTGCACCCAGTGAAGC
TTTCTTTACCAGGTTTGCGGATATCGGTGAAGATGAAGTGCTGTGTAGTC
GCGTGATGAACCATTCAACGACTGGTTTGGTGGCATCGAATCACAATGTG
ACCAGTGATATCGATTTTGGAATCGATAAAGACGTGACGTTAATCGAAGA
CAACCGCGAATACAACCCCGTTGTTTTTGACGTTTTGAAAGTGTCAGCCG
ATGAAATCGCACAACAATTGACGTTAATCGATTTACCTTTGTTTCAACAC
GTTGAACCTGAGgaaTTGACGAGTTGTTCGTGGACGTCCAAACGAAAACA
TGATAATTGTCCCAACATCGTCAAAGCTACCAAACGATTCAACCAGGTCA
GTTATTGGGTGACACGTGAAATCCTGGATACAAACACAGCCAAGGGACGC
GCAGAACGAATCGCTTACTTCATAAAAGTTGCTAAGAAATTACAAGAATT
GAATAATTTGAATTGTTTGAAAGCAGTAGTATCTGGTCTGCAATGTACAC
CAATATATCGTCTAAACAAAACCTGGAATGTTGTACCAAAACGGGACAAA
GAAAAGctagaaaaattaaatgaaCTTGTATGCGAAGAAAATAACAGTTC
CAAACTACGGCTTCACTTGCAAACGACAAAGTTACCATGTATACCTTACT
TAGGAATGTATCTGACAGATTTGACGTATATCAACACTATACATCCTCCA
ACTGGTGGATTGGATGTAGAAAGGACCAATAAAATGAATGAAATACTAAG
GATCATAGCAGACTACCAACAATCTTTATATGATTTCAAACCGATATATG
CTGTACAAAACTATTTGAACTCCGTAAAATATATCGATGAGCTGCAAAAA
TTCATGGAAGATGAAAATTATAAATTATCATGTCAGATTGAACCAACGGA
ACTTCAAACGCGCGCTGAACGAAATGGAAGTACTGGAAAACGGGAAACTG
TCTCAGAATCGGATGACACGTATCGTTTGTATCCTAAACAACCAGCCTCG
AAGTCAAACAGTTTGAACCCCAGGAGGACTGGATCAAGCATCAATCCTAA
ATCAGCCAGTCTGAATCTCCCAAGCACACCTTTCAATCAGCACCGTTCTC
CTTCACCCAATAGAAAAGACTTTGTTCCTGGACATCGCAAAGTCAAAAGT
CTGGGGAGCACGCAAATCTTTCTCCAATCGATAAGTGGAATGAATCCTAG
TTCAACGTCAATATCATCAGGAAGTAACGTTTCAACTGGCTCTCGATATA
ATTTAGTGGACGATAgtatcttggaagataatttaaACACTGATATACGG
TCGAGTACGTCTTACGATTCCGGACTAGATCATGATGAACCCGAAACTCA
TCCGATAATCCGATCGAACTATATAAGTGAGGATACGAAACcggaatttt
attttaaattacaAGGATTTTTAAAACGAAAGACATTAAAACGAAATGCG
ACTAGTCCGAAAGTAGCGAACTGGCAACGGTATTGGGTTGGAATTACTTG
TTCACATTTGGTATATTTTTTACCTAAGTACAGGGCGTTTGGTGGTCATG
ATCGAAATAATTTTAAAGAAAACGCAGAGAAGATTCTTCCGTTGTTTGGT
TCCGACGTCTGTGAATGTAACGAAGAAGGAAGCTTCCAACTGACGGACGA
AAGCGGGGCCAACGTATACCGGTTCCGTGCGGGAACGAACCTCAATCGGA
AACTATGGATGGATTTCATCAAAGAAGCTTCAAATGGCGGCATGAAAGAA
CCGCCTCAAAATCTGATAACGTTTGACGATGATGATACTCACTTATGACG
TCAGTGGACTACTTTCTCTTTCTGAATGTTTTCCAACCGTCATCTTTCGG
TTCCACTCTACAGTTATCTCCAGTCCACTTCCGCAGATGATTATCTTCAA
TCATGGATGTCGCTTAATCTCCCAATTCTGTTATGGAATAACCAGTGAAC
TCCAACCAACTCATTATCCGTACACAAAATGATAGTTCCTGGTTTGAGAC
TCTGGATTCTTTTTACATCGTCACcaattatgaaaataataataaatcaA
ACAACAAAATATTCGCTACTTAAAGCAGTGGACAActgaagaattttttt
ggaatatttcttACATTCATTTCCAATACCATGAAAACTGCGACAAAGTG
ATTTCTAATAAAATACCTTGAAGTAAAGGTGGAATACAACCAAAGGGTGA
TGGATAACTGAAGAATTTTTTATTGATACttaattatattatatatttac
TTTGAACATAGGAAAAAGTTAATAGAATCAAATTTTTATAGAATATTGTC
TAGAAAACAGAGAATACTACTATCAGTATGATATATACGTGATATATACG
CGAGCTTCAACGAGATGAATACTATTGACCAAGCTCCCAGGGAGCTTCCT
GATTTTTTCCTTTTCGCCCGGATTCTAATTTCAATTGTTATGACATGGAC
ATGGCGGATGAACTTAGggcgaaaatttaaaaagttttgtgaAACCCTGT
TAGTGATGAGATAAGATGATCccaaagagaattttttcattttttgtttc
aagAAAGGAGAGAATACTGAACAGGTCTCTCAAAGgatttactttaggcg
tacaagctttcgcgagcagaaacttttgcgattttcgtctttaaaaattc
ttggaagggccattcgcgaaagtttctgctcgcgaaagtttgtataCCCA
AAGAGTTTAATATCATTATGTATAGTGATTTATTATTTCGAAATGGGACT
TTATATgaaatttctgtaaaatatcCGTCTTAGAGTCCcgtagaaaattt
atttttgtatataGGTCCTCTTTTGTCTCCTTGAGTTCCCTTTTTTGGAA
GAAGTTTGGGAGATGAAAGTTTATATTGTATAAAAGATGGAAAAAGTGTT
CAAAATATAATGTTTATTGATGATAACTCAa
Run BLAST on NCBI

transcript from alignment at scaffold_242:1654472..1672472+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054288 ID=TCONS_00054288|Name=TCONS_00054288|organism=Clytia hemisphaerica|type=transcript|length=18001bp|location=Sequence derived from alignment at scaffold_242:1654472..1672472+ (Clytia hemisphaerica)
CAACGAAGTATTAACCTATTGACTTGAATTCTTGTCTCAGAAAAAAGAAC
ACTAAAAATTATCAAACATATCAGCATTTATACTATGAAGCTTAAAGTAT
AGAATGATCTAGCTTTGCCTTTATTGTCATATTGTGGTGAGCTAAAGGTT
CAAACATCAGAGCAAATCATTCAAACACATTGGAGTTGCAATGGAAACGA
ctggaaaaaaatcaaactagatatacaaaaaacttgattttggTCATTAC
CGAAGTCTGATCACTCGGACGAAATAAAGCGAGTTAACATTTTCGGACAC
CTTGGATCGGTAGATTTCACCAACAATTATTAAATGAGATTCATGGAAGG
TTTAGGATCTCTTATCTCTCCATCACGAAATATTTACGATGCCGCCGGAT
TGGGTGAGAAAGCCCGCATGAACCATCCACGGTTGAGGACACGTCGTAAA
ACATGGGCGGGTTTCCTTGACAACCGGCCACAAAGTGCACCCAGTGAAGC
TTTCTTTACCAGGTTTGCGGATATCGGTGAAGATGAAGTGCTGGTAAGTA
TCTTTCTCCATCTGGATTTTCAAATACCAATCTTCAAAGCTGCTATAAAA
GGAGAATGGAAGCCTTGAAGCTTAATGTTCTTATATGCTTCTTTGCTcct
atttaaaaaaacgtgcaccAATCTTCAAAGCTTCTGCAAAACATTTTGTC
CTGCAGTGACTTTCAATACTTCTTATTCCTCACTGAGACTGAGTATCATT
TGATTGATTACCAGTGGTGTAACCAGTGTCCATTATTTAGGACGATTTCA
ATTTTAGCGTTAGCACTTATCTATCAGGTATGTATTCTCCTCAAaaggtt
tttgactttttttggaaGGTTAGCATAAAAGCATTAATTTTTAATAATCC
AGGAAGTTGTTGATGGGAAGCATTGACATTCATAATgagctttttacttt
ttttacactttGCATCTCGATGCTAATTCTGACCAGTCTCCTTTCTGACA
GCAAGGAAAATTTACTTTAACTATAAGTGTTTTGTTGAAAGCCAAAAGGG
AAAAAAGCCTAGAATATCAAGAAAGACCATTCCTGAAAGTTTTCTAGGGT
GGTTTCGCAAAAATATCTGTACATTAGAAAATAGAggaaaaactttcatt
tttaaggcATACAAGCAGAAAGGGGAAGCAATTCATATTTACTGCTGTAA
GAAaaacttttatgacgtcatcaatgacaAAAATACACATACATTAGAAG
TAGTATTACGAACAACTTCAAAGGGCTTAAATCGTCATTTGTTAATGATT
CTCCTAAAACGATGCCAACATCAGCGTTTCTCTTTATTATCCATCATGCA
ATGCATGATGAGCCACTTTTTCCATGTTTCATAGAATTATTCCGTGCATA
TGCAATAAGGAGTTGAGGAAAACTTATTAAGTCTAAACCACTTCCCATCA
CTACCCTTGCTATAACTCTTAAGAAATGCTAGTTGTTCGATGAATAAAGA
CACGTTTATAATGCTTTTTGAGATataggttcgagttatagaggttcgag
ttgtaTGTAGTAGAGGTCTGAGTTATGTAAAGGCTATTATTTTTTACAGT
ATCGTTTATTCTTTCAAAACCAAAACTCAACTGCTAATGAATTTCATTAA
AGCGAGCAATTATACAAATTATACCACTTGAAAAATGAGGTTGAATTTTA
CATATTAAATCATGCAACATGCTCATGCACGACTTCTCCTCATTAAGCAA
ACATTAAGAGCAATTACCTCCTTCCTTGTAACCATCTAaccatctgatga
cgtcatcatatgTTATGTTGTTGGGATGgtaccattttgttttttctgtt
tgTTGTCGTTCCAAGATACAAACATAACAAACTTTTTGTAGTACCAATCA
CAATATCTTGATGTCGGTGAAATTTCCTGTGTATAATTTCATCAAAACTT
GACCTAGTACTTGTACTTatgaaatacacgcttttttttttataagaata
cactttataagaatgtccatgatgaaaatggccaaaaaattaagaatatg
gtaagaatatcaccatcatgaaaNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNataccgtaagaatatttttgga
tgattttcgccaaaaagttaagaatatccatgatgaaatgaaaaaacacc
attcttataaaaaaaaaagcgtgtataccaAATGGGTTAAAAGAAGGTAT
GCCTTTGATTCTCACTTTTACCTACGATCTAGCCTTTATAAATGTGATGA
GTATAAAGAATGGTTTACGCAAGTTAAGATTCTGCGAACGACACCATTCT
CATTCATTCATCATTAGCGGCTGTTTTGTAAAGGTGAGCACCCAGCTGCG
GTGCGCAAGGCTACGGGTTAAATCCCTGGCTAGATCATACCAAAGATCAT
ATACAGGTACTTGATGCCTTTCTGCTTAATGCTCAGCTATGAAAACGAAG
GGTCGAGGGTAAGTTGTACAATCGAGGTAGAAAGAATCGGGTCCTTACTT
ACTTAAAATGACCTGTACCTAGCCCCTAGCATACTGTATTTTccgttgat
tttttttcactcacTTTTCGTCCAGAGTTTACTATCGGATACATCTTTTG
TAGCTTATTCATGTTTTTGCTAAAAATACACTACGAAAGAATGAGGAAAA
GGTTACTTGTAATAACTCAAACATACGGGCCCaactgacacacaacgttg
tttcaacgttcatctaacgttaaatggacgttgtgaacattaaattgacg
ttgaaacaacgttgtgtaccagctgggaagGAAGGGTGTTCGTTCAATCG
TTTGTTTTCATCACCGTGAAATTGTATATAAGAGATATAAGTTGACATAA
GTAAATACAGGGATCTTCCGTTTATAGGTTTTGTATCTGTCGACGAGATC
TATTcataattttgttttcatttcgaGTAACGAAAGATAATGTGTATTCA
GTGAGAATTTTGTCGGTGATTGTTGTCGAGTTATATTTTTAGAATCAAAA
TGCGTTCGGATTAAGAATGTGAATATAGTTGGTTAGATTTCTGTTATAGA
AGTACAGTCTTGTTTTGGTACCTATAGGATAATTGGaatcttgaaaataa
tttatgcTGGTACTACTTCATATGAAGAGAGATGCTCGAAGAAAATGTCT
TGCATAATCTGACAACTATTTTTGTAATCAAGAAATCATCACAGGACGTT
TTTAACCTCTCTGCTGTAAGAGGATTTCATTCGAGAAGAATAAAGCTTTC
AAAATCAATATGGCGACAGATATCTTATGGATCAATGGCTTGTCTTTTGC
TAACACCAATTCTCAACATCAACAAAATAAAGTAATGTTTGCTCTTTTTG
TTGACACCAAACCATATCTCTGAAATACTAAATCTGAAGTTGCATTGCCA
AAGGTAACTTCATCTTACAAAGATTTAAGATTCGGTTCAAAGTTACCAAT
GGATGTTTTACTTGATCGGGTCGGAAAGTGATTGGAAACATTTGTGAAGA
TGTATGTGTGAATCTTAATTTCTCGTAGCCCATGTGACCTCGTCACGATT
GCTGATGGTTTTTATGTCTATTATCACCCTTTTCGTGCTTTTGGCAcctc
aaaaatataattttgcaccttatttatttatttctaagCAAATATTTTGG
TCCTATAAGTTCACTTAATAGATCAAGGCGATCTTGGTCCTATAAGTTCA
CTTAATATATCAAGGCGATACTACAATTTTCTTAATTTAGGAGATTACAC
TTAACGTAAATATACATGGGATACATACAAATACAAATTAAGAGACTgct
tcccagctgacacaccgttttttcgacgtttatctaacattcacaacgtc
caaataactttagatgaacgttgaaacaacgttgtgaaGAGACCACTTAT
AAGAATCCATAGATATGTGAGTGCTTCAAAAACTCTATTCTATTTTGATC
GAATTATCTACAAAATCAACTCTTTAACAAAAATCACGTTAAGTCAGGTT
TATCTCAATGGTCACCCCTGGCAACTAATTGGATTTTTGTGGTCCCGCTC
ATTAAGATACTTCGTTTATTGTTCGAATGTTGTTTCAAGGTATAACATTT
AGTACAACTACAAGTTGTATCATTAATGTTTAAAGCCGTTTAAGTGAGGT
ATAACAAAAAGGGACATTCTCTGTGAGCGATCACTGGtgtgcaaaaataa
aattgagaaaGAGATAATCTGTTGCAAAAGAATTTTGTTGAACATCAGAG
AAAAATACATCATGATTTGATCCCAAAGTAAAGTGTTCTAGCTGTGTGTG
TGAAGACAACAAAATATCAATTTACtgcaaaaagaaactttttcccTGTT
GTTGTATTGTATTTTGAGATTTATTTCGTGTGTATTACGTTGTTACCGTC
AGTGTATCATCGAGTCACTTTGACTGTAGCAAAACACTCTAAAGAAGTGA
GATTTAGCACTGAAATATCCATTGTTTGGTTGTTGAACCCTTACACTCAT
AGAGTGACTTTTACTGTCGcgaaacaaaacacaaaacactCTTAAAAGAA
GGGGCAGTTAGCattgaaacatttggtttgttGGTTGATTATTTGTTGAC
CTCTCACGTTCACGATGAGCACGCGCACGATGTACTTCAATTACAATTGG
AATCAGAAAGCCCTTACACGTACAATGTCGGAAGGGGTAAGCAGGAATAA
GTATTTTATGTATATGAAGCATCTTAAAGACTAAATGAACATCTACCAAA
GCTGTTCAAAAACTTATTTTGAAGGGAGTACTTTTGGATGAGTTAGTTAC
TTCACACATTAGCGTAGCATCGCAGATTGATTAGGTTGtacagtcgactc
tctctaattcgaactcaaacggGAATCTGttttgttcgaattacggagag
attcgaattatggaaattaTTTTACGAACAATTCTcttgaattacagaaa
gattcgaataaaagcTCACTGTATATCAAATGTGGTATTGTTTTGTCTGT
TGGCCCTTTTACCTTTTTTCCAGCTTGATATTTTTAAAGTCAGTATAGAG
AAACATGTAACGCGGCTGATATTTCTCTCGATTTTCTCCTGCAGAtattt
ttgtcatgtttttCGAAGGTAATAAGCTTTACACTGTAATGACAAAGTGA
TGAGAAAATTTGACGATCAACTTATTTTGATTGTAACTCTgatgagaaaa
aataatttcactgCTCTGTTATCAAAATTCTGTATGGTTCGATTAACGAG
CGGATGAGTATTTTTCTTGAGCATTTTGTGTTTAGGTATTCTTGCTTTTT
CTTCGCTATTTCATTTAACTTCAAGATTATATTAATGGTGTTGGTGTTGT
CAACTCTGTGCTCTGGTTTGTGACAAAGATTTTACCACTCCTTGGTTAGA
CTGacagtgtttttattttctgtCAAAAATGATGTTTTAACGCCACAGGA
CCACCACCAAacataaatttttcaatttcctcATGCtaagaattttgttt
tgatcctttgtttttttgttttgaacgtgTTTCCCGATTTTGCAGCAGGC
TTCTAAATCACCTAGGTATAATTTACCAGCTAGCTTACTTGCTCAACACT
TTGTCACATTAATAAAAGTTCCGATTAAGAGTTTTCAAAGtgaagtttaa
gtttaagtttaagcAATCATTTGCTTTATGATGCTGCTTCTAGCTAGATG
AAACTCGGCTCTTTTGCCATGCCTTGACAATGCTTGTGAGTATTTCTGAT
TCGAGCATCAGGCTCGTCAACTAACCCAGCTATTcgtgaaattttctttt
atttagtcGATTCTTAGTTAAAGTCTCTACATACTCGCTCAGCCAGTTTT
TAAATACAGACTTCTGTactaaaacttttttcttactGAAAGTGTAATCG
CGTGATGAATCATCCAACAACTGATTTGGTGGCCTCGTTTATCCAGTCTT
TAAATACAGACTTTTGTACtaaaacttttttcgttttctttacAGTGCAG
TCGTGCGATGGGTATGGTTGGCCTCGGTTAGCCAGTCTTTAAATACAGAC
TTTAGTActaaaacttttcttctttcttctttacaGTGTAGTCGCGTGAT
GAACCATTCAACGACTGGTTTGGTGGCATCGAATCACAATGTGACCAGTG
ATATCGATTTTGGAATCGTAAGTCTAATTTTTGCGGCAAATTGAAATCGT
ACAGGAGGAAGTTTGACCCGGATCACGGAAATAGATGATTTTGGGGAATA
TAGTGGGGCGGAAGGGTGTGATGCCTTAAATTCAAGAAAAGTTAAGTCTT
GAATGAGGGACTGGTCTATTGATTTCTTTTccaataaattaaattgaaaa
cttTTGGAATTTTAAAAAGAGACATTTTGATTGAAGTATTTATTTGTTCG
TCTTCTGAGATCACTTTCCGTCAAACCTTTAAATGTTCCAGGCGGCTGTC
TTTGAAACTCAAACACATAAACGAGTGTCGTTCGTActtatttggaattt
ttttcactatTTCGTCATCAGGTCATCATAACATCGATCAAAATTTCAAC
ACTTGATCTAAATAATTTTCGTTAACTCTTGTGAGAAAGCTTTCATCTGT
TAAAGTGATCAAGTTGTCACGTTTGAGAGTATGATTTTGTATTTTCACAA
GACCTAGTCCCTGAACGGTCTCCTGACTTCCTGGATATACAACCTATTAA
CTTTGAATTCGTTTTTCAAATAGTACAGTGGATCTATTGCCCAAACATAG
CACTGACTTTATTTAAAAAGGGCCTTTGCCAACAGCCTTGGTCTCTGCTA
acctaaaaactcaaaaaagaaaccattttatgattttcccAACACATTTT
TTACAGGATAAAGACGTGACGTTAATCGAAGACAACCGCGAATACAACCC
CGTTGTTTTTGACGTTTTGAAAGTGTCAGCCGATGAAATCGCAGTAAGAA
TGATTCGCATTTTTCTCTTAACCCTAtaagccccaagcttttttgacttt
tgtatccccagggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNggggggggtagaatctaccaccctcgattattttcgatctag
aagagctatggccatgaaatttggtacagatgttctctatcatgatacaa
ttttccaggaagaaaaaaaaaattgatgacgtcattcaaaaactgatgac
gtcatcacaaaatttccacctgtcggaaaaaagcctaaatatatggttta
caaatatgtctattacagtcgaaccaataaagatatttcaattctgttta
aagattctgaaaggtaaaagactgttctttaacataattgccggtttcac
aatttccatgaagagtttttcttaaaatctaatgCTGacgatgagtaaaa
ttttcagaatttgatgacgtcataaatgatgacgtcatcattttcaaaaa
ttttcttttgattttttaaatttgtattatcaatgcctatcacgtgtaaa
aatttgaaaatgattgaataaatagtttagaagttaNNNNNNNNNNNNga
ttttagctgggttttatgtcatgtttcacaataaagtcataaaacctgat
ctggacaacctatgaccctaaaattttgcacaagtactccTAATAAGATT
TTATTAAAagtcagaaagtttcaagtcgtttaaaaaatttttctccgaga
tataaacaaaagaactccagcgtggtagattctaccccccctggggctaa
tagggttaatgaAGTATTGGAAACTGTCTTTTTTTCAACATAAGGCATAA
AGAGATACTCAGCTCTATACGTGAAGGGCCTATATGTATGCTCATTTTTC
TGGAAGATGCAAATTGAATATAATTTTCAAGGCCAAAATTAATGAATTTC
ATCTNAGGCATAAAGAGATATTCAGCTCTATGCGTGAAGGGCCTATATGT
ATGCTCATTTTTCTGGAAGATGCAAATTGAATATAATTTTCAAGGCCAAA
ATTAATGAATTTCATCTCTCAGAATTCTTATGGAATCTGCATTTAATTGC
TTTTGCTTGTTAAGGACCCCTAATGTTTTATGGGTATTACTTTTCGCTAA
AGGTTATGACATTTTTCTAGAACCCTTGTTAAAGAGTCACGATATATTGC
CAACCTCCGCAGAGAAAATTGATTAAACCGAATTGCATTTTTGTTTCAGt
tgttctttttcatcaaagtaGAGATTAGGACCCGTTTCATAATTGAAACA
TTCCCACCACTAAGAAGCATACTGAATTGGTTGCTTATTAAAAGATTGTT
AACACTCGTTATTTAACAAGGCTTACTTAGAGTCTAATTAAATCTTCAAA
TCAAACTCTAACCATGTATCTAATTGAGAATTTactatttaaatatttta
aattgtgATCTCTTAAGATCGTTTGCAagaaattacacgcttttttttaa
gaatacactttataagaatgtccatgatgaaaatggccaaaaaaataaga
atatgctaagaatatcaccatcatggaattttgctattcaagcaaagaat
gtcatttttagagcattctaaattataaattgccaattaccccaaAGTAA
TAAggatgctgtaagaatattttaggatgattttcccaaaaaagttaaga
ataaccatgatgaaatggatttacaccattcttataaaaaaaaaagcgtg
taaatggGAGTTTATTAGATTTTAAAACTCGAGAGCTTTACGATTTTCCA
AAATTGAtaaagaatttctcaaatttgAGCTTGTGCAATTCTATCGAACA
ACCAACAATGGATGAATCTTCTCTTTTTGTCTTTCCAGCAACAATTGACG
TTAATCGATTTACCTTTGTTTCAACACGTTGAACCTGAGGTATAAACTGT
TCTTCTCTCCCGATTATCATTCATCATTTCGGACGCTTGTTGAATCTCGG
ACAACAAAGATCCATCATGAATAAATATAGTCATATAAAAAACGattact
tttttgttttatatttcaCTAATTCAtcagaaaaactttgaaaaagttaa
cattttgagattttaattCTACTCATAAAAATTATTATACACTTTGGGAA
ATGCTACTCATTTTTTTCGAcatttcattttgaaggaaTTGACGAGTTGT
TCGTGGACGTCCAAACGAAAACATGATAATTGTCCCAACATCGTCAAAGC
TACCAAACGATTCAACCAGGTACTTAAAGTGATTTCTTTTGTATACATAG
TTTATGAGCGCCTGTGTGTTTTTGATACTGTTTCTTAGTAATTTCATTAC
CAATCTCCTCAAAAGCTTACCGCGCCTATAAAGGTTGATGGGTGTATTGG
GGCTGTACCCatagatctgtaaagcccgaatggctagatttgcggctttt
atcgaaaagtgaagcctaggtttggaaggatttcctaccaaagtcacgtg
actaaaatatgcagtTTCACCGGTTTGANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCGCCTACtctttttgatctcgcgctccgaaaaca
attaaaatgctagatcctatccatcggcacgaaatttaaaaagtcaaatt
tttgctttacttttttttgctggagaaagcttaaagttgcctatctagcc
tttcgggctttacagatatctgtggctGTACTAGTACCAGTACCATACAT
CTTTCTTTACTAATTCATTACTTTGACGAATcacacttttttgtttttta
tgatGTTAATTTTTAGGTCAGTTATTGGGTGACACGTGAAATCCTGGATA
CAAACACAGCCAAGGGACGCGCAGAACGAATCGCTTACTTCATAAAAGTT
GCTAAGGTAAGACCCTCGATTATGTCTGTCCAAAATAGGAGAGATTCTCG
TCTTTTTGTTTGGGTCAAGAATTCGCTTCCACAATTCGTCTTGTTCTGTT
TGGTGGCATCTTTGAAATTCTCTTCCTTTTGATCAATTTGACTCATTTGA
AACTGCTAACACGCAAATTAAGGACTAATAAATAAGGTTGAGGGGTAGAA
TCTCCTCATTACATGGTACTTGAGGTATTCAAGATAGTCTTTTAAAATTT
GTAATTCTGCCGCAGCGAATTTTGCAAGTTTGTTttgacgtcataaaaaa
tacTTGTAAACTGAATCATTTCGTTTTATTCTTTTAGAAATTACAAGAAT
TGAATAATTTGAATTGTTTGAAAGCAGTAGTATCTGGTCTGCAATGTACA
CCAATATATCGTCTAAACAAAACCTGGAATGTGAGTTCATGTATTTTTAA
CCTCGGAGTAATGATCACATTATTAGTTTACTTAATCTGATGTCATTACT
TTTGGCATTCTTCATAATatgtatatataattttttgcaTTCTTTCCGTG
CCTTTAATGCTTCAATTACGCTTTCCTTCAGAAGAAAACTCTATTTCTCT
AGTTCCAATTCCCTCAGAGTTCTTACTCTTTAGTCAAGGCCTCTCCTTGC
CTATGACTGTAAATACCAAAGTGTGTCGTGGTTTCGAACTAATCTTATCT
TGATTGAatagtcaaaattcagtatctTCAAATAGCGTGTCACACATCCC
TTTAAATAACGCGAAAAACCGTAATCTTATCTTTCCTGGAGAGCCCGCCT
TCCTTTTACCCCTTGACGTTTTTACATTGATTTTGCAAGATACAGTATGT
AATACACTCACTATAGAGAAATAAcagtattttcttgttttgttaTTCGC
GACATACTGTAATAGCTTCAAAACATGATCACCCGAGAAAAATGTGGTGA
CTCATTAGTATGGAATTTTGATTTCTGAATCTGTAAAAGATACCTGAGCT
TTGAGTGATTTTATCTGAGACTTTAGATTTATCATCTTTTTCCTCATCTT
TAGGTTGTACCAAAACGGGACAAAGAAAAGctagaaaaattaaatgaaCT
TGTATGCGAAGAAAATAACAGGTAAATCACGTTAAACCATACATAAAGCC
CTTTCCCTTCTTTTGCGGGCTTTCTATCTGATGGCTATCGATTTACAACT
AATCGATTCAAGGCTCGtcaagaaaattattcttggcTCTCGATTAAACG
GTTACAGCTTGATTTCGATATTTTAATCTTCCATCAGGAATTTCAATGTT
CATCTTTACTAGTAGTTTCACCGCATGCTATTGAGGGATGAGATCTTTCT
ATGTCCTTCATTGCTCAATTACTGTAATTTCCAAATGCTTTTAAAATGAC
ATGTAATTTAGCATCCTAAATTGTCTTTTTGGCATCATGAAACAAAACCT
TGTTTTATCGCAATCAAAGCTACATTAGAACATAATTACAAGTTCATTTT
CGACCACTAAAGCATGGTTTTGTGATTAATTACCAGCCCTTTTATCTCAT
GACACGCTCTAACGGAAATGAAGATTCCATTGGATTTCATTAGACATGTG
TTGTTAATTGCTGTCATGTGATCTGATTTTCCCACGGGAATTTAAGCGTT
TCCGTAATTCAATGGTTTCTCCGATATCTGCTGACTTTAAAAAAGAACCA
TCTAAAAATTAATCTCAAGCAAAGAAGAAATTTCATATTTGGATTTAAAA
CAGtttgaattttgtttgaaaagcgCTACGCCTTTTGTATGACTGGGTGG
CCGCCCTCCGAGTCTACTTTGCCCCTAGCCAAGTGAGTTCCCTGCTCAAG
AAGACTCTGTAACTGAAAGCTGAGTGGATAAAATATATTTGTAGTTGAat
ctttgaatatctttacaacgaTAACACCTTTCTTTGGTCTTTTTCTATTG
CAGTTCCAAACTACGGCTTCACTTGCAAACGACAAAGTTACCATGTATAC
CTTACTTAGGTTTGTACTTCattctaatttgttcgaattacagagagatt
caaatcatagaaagtattttatactgttttctccttgacggggataAAGA
ACACAATCGggttatagaaagattcgaataataataACTCGAATTATAGA
GATTCTACGTTCAATTTTACGTTGAAGTTTTtaagttttacttttttcaa
gttGTTGttggttgtttttgtttttttgaaagttaatAAATGTGAAAAGA
ATCGTGATTTATTTGCAGGAATGTATCTGACAGATTTGACGTATATCAAC
ACTATACATCCTCCAACTGGTGGATTGGATGTAGAAAGGACCAATAAAGT
ACGTATTATTGGTCCTCGTAATTTAATGCTAATATGCACGGTATTAGTGT
AAATATCCTCTCAATTACATTGTGCTACTAGTTGCAAATAGCTTTTTTTA
ACAATATATACCTGCTCTGCCAGAAAAATCTGtgatatagttggacagaa
aattcttatttctttgcATATATactcaaaagaatatttttgaaaattaa
ataatgtcaattttaaccattttgcAGATGAATGAAATACTAAGGATCAT
AGCAGACTACCAACAATCTTTATATGGTAAGTTCATTCAAAATGTATATT
CAGCCTTTAGCTTTTGCCGATGGTACAAATATTTCACAGATTGTGTTGTT
ACATTTTCTTCTAGTATCGCTTCAttcgttttctttataagaacatccaa
aatttttgaagcctccgaatgttcttaactttttgagtttcctGAACATg
ttaacatgctcttatttatgccattttttgagtatttttttccattttcc
taagaaatttggtgCTTTTGAGTCCGCAGAGGCTTAAaataattgttctt
atatagtttgttcttataaaaaaacgggTACTCGATCATAAGGAAATGAG
CTACTCAAATTTCCCTTCCCACAAAACCTTTCACATCCCGAGACATCCTT
ATCTTCTTCTACATCGTAGATGGCTTAACAGCTCGTGAAGGATTTTCTTG
AAGTATAACGTATAAGTGGTTTATAGAAACTTTATCTAtcgtcaaaattt
tttattaagcAGATCAATGACCACTTTATAACGAATCCTCATCATTTAGC
AGATGATATCTAAACATTTTGAATGATTAGATTTCATAATCTACTTCTTG
TGATTGTACTAGTAAATCGTCTCTCTTTTCTATTCTTGATAGCAAACTGA
TAGAAAGCCCTGTGTTAGTTTAATAGCTCGAGGGGTAAAGAATCCTACAT
ttactaaaaattaaaaatatataaaaacaatgacaaatttcataaagatc
GACAAATTTCACTGTCCACAACTCTGACCCATCctattcctctttgttta
tcacgcaGATTAACTACATATGATtcaaagaacgacaaattacgcatgcg
tgttataatgcaggattctttagaggaacatACTGTCTGGACTGTAATGG
CTTTTAAACTTTTATTCCTGGTCAGTTATCCaatccaaaatgaaaaatat
gctAGCGAGTCTggatgtaaatttttttaattttatttcctGTAGATTTC
AAACCGATATATGCTGTACAAAACTATTTGAACTCCGTAAAATATATCGA
TGAGCTGCAAAAATTCATGGAAGATGAAAATTATAAGTAAGTTGTGCCAT
ATATTAATATGAGAAAAGAATCTTACGTTTAAGTTATATAGGCTTGATTA
TGTAATCTTTGTTTGAGTGTTCATCGTTTGTAAGCACTTTAAATTTTACC
TTTAATGACAGAAACACCTACTTTTAAGGCCAGGTTAACGATATTGAGAT
CTAAATCGCTATGAAAAAAATGCTGAACTTGCACAAACACTGCAATGTTT
AAcaataaataatcaaaaaaCCAAATAACACACGTTAGGCCCTTGGTTGT
TCAATATGACAATTATAGAATGtcttctttttataattttattatgCTTT
TCATTGCTTTTTCAAGATCCTAAATCTATCTCCGTTACAGTAAtcctttt
tcattgtttttctcTTTACTTCAGATTATCATGTCAGATTGAACCAACGG
AACTTCAAACGCGCGCTGAACGAAATGGAAGTACTGGAAAACGGGAAACT
GTCTCAGGTAATGTGTGATTTGCTCTCTACCAATCGCACCTACTCCCAAA
ATTCTAGATTTTATTTCATAGCTATTTAGGTTACAAGTTTTTCATGCAGA
AACTCTTTCGTTTTCTCATTGGAATTCGCTAACTAGAATATCAGATCACT
GTGTTGGTCGAAACTGCGggctattccaaatcgctttagtCACTCTGCTG
CCCTACTTAATCATGCGCAAAAAAACTAGATGTTTACATTAATCCTTCTG
TAGATCACCATTACTCATCATTTTCTGAATCTCTCTCACAGAATCGGATG
ACACGTATCGTTTGTATCCTAAACAACCAGCCTCGAAGTCAAACAGTTTG
AACCCCAGGAGGACTGGATCAAGCATCAATCCTAAATCAGCCAGTCTGAA
TCTCCCAAGCACACCTTTCAATCAGCACCGTTCTCCTTCACCCAATAGAA
AAGACTTTGTTCCTGGACATCGCAAAGTCAAAAGTCTGGGGAGCACGTAA
GTTTACTTCTTATCTGTaaacagacccgatatctacggataatttcaaaa
ttcattcatGTACTACGCTACGTCATACGTGAGATATACTCTGATACAGA
ATAGTTCACTTCCTGagctcaaaattttgaaacagaAACTTTGCAAGATA
TCTATCCACCTTTTTTCCTTGCTTGCATTTTCCGACATTGCTTGGTGAAA
CTTTAAAAGTAACTTTTATTTCGCTTTTAGGCAAATCTTTCTCCAATCGA
TAAGTGGAATGAATCCTAGTTCGTAAGTATTTTATTCAATTCTCAGtctc
tcaaaatattttgtagTCTAAGTCTATTTTAGTGACATTATCCCTAACTA
ACTGAAAGTTATTTATGGGGCTTCTCAAGTAGCCTAACCCTATTCCAATA
TTATCATACTTAAGGCTTAAAAAAGAGATGACACGTGTACTTTCCATTCA
ATTAGGCGCGATGAGATTTAATACAGTtatagttgactctctctaattcg
actttcAAGGGATAGagatttttcttcgaattagagaaagattcggatCT
TTGATGGATCTTTTTAAACCAGTTTCTAGTTGAAGGGATCAATGTTTTAG
CTCGAATAACAGAATAATTGTggttcgaattagggagagttGACTGAATG
TTTCGAATCCTGAAATCTGATTCTTTTTACTACAGAACGTCAATATCATC
AGGAAGTAACGTTTCAACTGGCTCTCGATATAATTTAGTGGACGATAgta
tcttggaagataatttaaACACTGATATACGGTCGAGTACGTCTTACGAT
TCCGGACTAGATCATGATGAACCCGAAACTCATCCGATAATCCGATCGAA
CTATATAAGTGAGGATACGAAACcggaattttattttaaattacaAGGAT
TTTTAAAACGAAAGACATTAAAACGAAATGCGACTAGTCCGAAAGTAGCG
AACTGGCAACGGTATTGGGTTGGAATTACTTGTTCACATTTGGTATATTT
TTTACCTAAGTACAGGGCGTTTGGTGGTCATGATCGAAATAATGTAAGTT
CATGttttattaatttcaaaatcataTCCACCAACTTTCTTTGCAGGTAG
TTAcaatatttttgactttttaaaccGGAATCAATGAAATGGGAACCATC
CCTCagtttgattttgaagaaataGACTACGTTAAATTACGTTACGAGCA
ACGCTTCcctcattttcaaaataattgttatagtaattgattcccagagg
agttcaTTAGAACTTTACTCTATTCAAAAAGTAACACTTGAAGACTCGAG
GGTATCTCCAtggcaatggtttcaaaacgaggcatctcattgcactcaaa
ataatttctattATAATATGGCCTATTCTCAGAAtgctaatttatttttt
tcaattttcaattttcctatTGTAGTTTAAAGAAAACGCAGAGAAGATTC
TTCCGTTGTTTGGTTCCGACGTCTGTGAATGTAACGAAGAAGGAAGCTTC
CAACTGACGGACGAAAGCGGGGCCAACGTATACCGGTTCCGTGCGGGAAC
GAACCTCAATCGGAAACTATGGATGGATTTCATCAAAGAAGCTTCAAATG
GCGGCATGAAAGAACCGGTAAGCTCTTGAGATGGGTTGaggtttcaaaat
ttcctattttGGTCTCATAAGTTATTTTTCaaacggaaacacccgaaaaa
aacCTGTTACTAAAAACAGAAACAGGGTAGTCAAAatccgtttttttttt
ctttaggtGTTTCCGTTAGGATATATGATGTTATCTTGGCTTGCGCATAT
CAAGAATCCCCTCGTTTTTAAACAACATTACCAAATTTAATACATAGTGG
ACTCAACCGTCAAATCGAGTCAGATCTTTAAATTATGAAGTAATTAATTC
GACCAATGGGTACTTGATTTCGATGTTGAGCGAACTCTTGGACAAATAGT
CGTAAATAAGGTACTTATGGACTTTGTACGTCGCTGTATAttaaactcaa
tttttttttctttttgctttcagCCTCAAAATCTGATAACGTTTGACGAT
GATGATACTCACTTATGACGTCAGTGGACTACTTTCTCTTTCTGAATGTT
TTCCAACCGTCATCTTTCGGTTCCACTCTACAGTTATCTCCAGTCCACTT
CCGCAGATGATTATCTTCAATCATGGATGTCGCTTAATCTCCCAATTCTG
TTATGGAATAACCAGTGAACTCCAACCAACTCATTATCCGTACACAAAAT
GATAGTTCCTGGTTTGAGACTCTGGATTCTTTTTACATCGTCACcaatta
tgaaaataataataaatcaAACAACAAAATATTCGCTACTTAAAGCAGTG
GACAActgaagaatttttttggaatatttcttACATTCATTTCCAATACC
ATGAAAACTGCGACAAAGTGATTTCTAATAAAATACCTTGAAGTAAAGGT
GGAATACAACCAAAGGGTGATGGATAACTGAAGAATTTTTTATTGATACt
taattatattatatatttacTTTGAACATAGGAAAAAGTTAATAGAATCA
AATTTTTATAGAATATTGTCTAGAAAACAGAGAATACTACTATCAGTATG
ATATATACGTGATATATACGCGAGCTTCAACGAGATGAATACTATTGACC
AAGCTCCCAGGGAGCTTCCTGATTTTTTCCTTTTCGCCCGGATTCTAATT
TCAATTGTTATGACATGGACATGGCGGATGAACTTAGggcgaaaatttaa
aaagttttgtgaAACCCTGTTAGTGATGAGATAAGATGATCccaaagaga
attttttcattttttgtttcaagAAAGGAGAGAATACTGAACAGGTCTCT
CAAAGgatttactttaggcgtacaagctttcgcgagcagaaacttttgcg
attttcgtctttaaaaattcttggaagggccattcgcgaaagtttctgct
cgcgaaagtttgtataCCCAAAGAGTTTAATATCATTATGTATAGTGATT
TATTATTTCGAAATGGGACTTTATATgaaatttctgtaaaatatcCGTCT
TAGAGTCCcgtagaaaatttatttttgtatataGGTCCTCTTTTGTCTCC
TTGAGTTCCCTTTTTTGGAAGAAGTTTGGGAGATGAAAGTTTATATTGTA
TAAAAGATGGAAAAAGTGTTCAAAATATAATGTTTATTGATGATAACTCA
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034238XLOC_034238Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054288-exon-scaffold_242-1491911889:1654472..1655014TCONS_00054288-exon-scaffold_242-1491911889:1654472..1655014Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1654472..1655014TCONS_00054288-exon-scaffold_242-1510915933:1654472..1655014Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1654472..1655014TCONS_00054288-exon-scaffold_242-1575043694:1654472..1655014Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1660758..1660838TCONS_00054288-exon-scaffold_242-1491911889:1660758..1660838Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1660758..1660838TCONS_00054288-exon-scaffold_242-1510915933:1660758..1660838Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1660758..1660838TCONS_00054288-exon-scaffold_242-1575043694:1660758..1660838Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1661528..1661614TCONS_00054288-exon-scaffold_242-1491911889:1661528..1661614Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1661528..1661614TCONS_00054288-exon-scaffold_242-1510915933:1661528..1661614Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1661528..1661614TCONS_00054288-exon-scaffold_242-1575043694:1661528..1661614Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1663560..1663610TCONS_00054288-exon-scaffold_242-1491911889:1663560..1663610Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1663560..1663610TCONS_00054288-exon-scaffold_242-1510915933:1663560..1663610Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1663560..1663610TCONS_00054288-exon-scaffold_242-1575043694:1663560..1663610Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1663857..1663940TCONS_00054288-exon-scaffold_242-1491911889:1663857..1663940Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1663857..1663940TCONS_00054288-exon-scaffold_242-1510915933:1663857..1663940Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1663857..1663940TCONS_00054288-exon-scaffold_242-1575043694:1663857..1663940Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1664538..1664627TCONS_00054288-exon-scaffold_242-1491911889:1664538..1664627Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1664538..1664627TCONS_00054288-exon-scaffold_242-1510915933:1664538..1664627Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1664538..1664627TCONS_00054288-exon-scaffold_242-1575043694:1664538..1664627Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1664959..1665051TCONS_00054288-exon-scaffold_242-1491911889:1664959..1665051Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1664959..1665051TCONS_00054288-exon-scaffold_242-1510915933:1664959..1665051Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1664959..1665051TCONS_00054288-exon-scaffold_242-1575043694:1664959..1665051Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1665675..1665742TCONS_00054288-exon-scaffold_242-1491911889:1665675..1665742Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1665675..1665742TCONS_00054288-exon-scaffold_242-1510915933:1665675..1665742Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1665675..1665742TCONS_00054288-exon-scaffold_242-1575043694:1665675..1665742Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1666575..1666630TCONS_00054288-exon-scaffold_242-1491911889:1666575..1666630Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1666575..1666630TCONS_00054288-exon-scaffold_242-1510915933:1666575..1666630Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1666575..1666630TCONS_00054288-exon-scaffold_242-1575043694:1666575..1666630Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1666890..1666969TCONS_00054288-exon-scaffold_242-1491911889:1666890..1666969Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1666890..1666969TCONS_00054288-exon-scaffold_242-1510915933:1666890..1666969Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1666890..1666969TCONS_00054288-exon-scaffold_242-1575043694:1666890..1666969Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1667199..1667247TCONS_00054288-exon-scaffold_242-1491911889:1667199..1667247Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1667199..1667247TCONS_00054288-exon-scaffold_242-1510915933:1667199..1667247Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1667199..1667247TCONS_00054288-exon-scaffold_242-1575043694:1667199..1667247Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1668217..1668307TCONS_00054288-exon-scaffold_242-1491911889:1668217..1668307Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1668217..1668307TCONS_00054288-exon-scaffold_242-1510915933:1668217..1668307Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1668217..1668307TCONS_00054288-exon-scaffold_242-1575043694:1668217..1668307Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1668696..1668778TCONS_00054288-exon-scaffold_242-1491911889:1668696..1668778Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1668696..1668778TCONS_00054288-exon-scaffold_242-1510915933:1668696..1668778Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1668696..1668778TCONS_00054288-exon-scaffold_242-1575043694:1668696..1668778Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1669063..1669267TCONS_00054288-exon-scaffold_242-1491911889:1669063..1669267Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1669063..1669267TCONS_00054288-exon-scaffold_242-1510915933:1669063..1669267Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1669063..1669267TCONS_00054288-exon-scaffold_242-1575043694:1669063..1669267Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1669502..1669543TCONS_00054288-exon-scaffold_242-1491911889:1669502..1669543Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1669502..1669543TCONS_00054288-exon-scaffold_242-1510915933:1669502..1669543Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1669502..1669543TCONS_00054288-exon-scaffold_242-1575043694:1669502..1669543Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1669957..1670314TCONS_00054288-exon-scaffold_242-1491911889:1669957..1670314Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1669957..1670314TCONS_00054288-exon-scaffold_242-1510915933:1669957..1670314Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1669957..1670314TCONS_00054288-exon-scaffold_242-1575043694:1669957..1670314Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1670697..1670888TCONS_00054288-exon-scaffold_242-1491911889:1670697..1670888Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1670697..1670888TCONS_00054288-exon-scaffold_242-1510915933:1670697..1670888Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1670697..1670888TCONS_00054288-exon-scaffold_242-1575043694:1670697..1670888Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1491911889:1671295..1672472TCONS_00054288-exon-scaffold_242-1491911889:1671295..1672472Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1510915933:1671295..1672472TCONS_00054288-exon-scaffold_242-1510915933:1671295..1672472Clytia hemisphaericaexon
TCONS_00054288-exon-scaffold_242-1575043694:1671295..1672472TCONS_00054288-exon-scaffold_242-1575043694:1671295..1672472Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1654472..1672472 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.147818	0.406406	0.0837097	0.241346	8.63467	6.0845	2.32546	2.52474	2.00774	3.90281	1.58173	1.93792	12.7484	10.3362	7.45724	14.6871	19.3069	17.8536	11.1064	11.4294	25.0507	27.8101	4.96867	7.8721	7.95332	12.7987	1.5173	1.34527	21.9274	18.9263
Blast
[Close]
BLAST of TCONS_00054288 vs. Swiss-Prot (Human)
Match: RGPS2 (Ras-specific guanine nucleotide-releasing factor RalGPS2 OS=Homo sapiens GN=RALGPS2 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.341e-102
Identity = 214/583 (36.71%), Postives = 316/583 (54.20%), Query Frame = 1 
Query:  646 EDNREYNPVVFDVLKVSADEIAQQLTLIDLPLFQHVEPEELTSCSWTSKRKHDNCPNIVKATKRFNQVSYWVTREILDTNTAKGRAERIAYFIKVAKKLQELNNLNCLKAVVSGLQCTPIYRLNKTWNVVPKRDKEKLEKLNELVCEENNSSKLRLHLQTTKL-PCIPYLGMYLTDLTYINTIHPPTGGL--DVERTNKMNEILRIIADYQQSL-YDFKPIYAVQNYLNSVKYIDELQKFMEDENYKLSCQIEPTELQTRAERNGSTGKRETVSESDDTYRLYPKQPASKSNSLNPRRTGSSINPKSASLNLPSTPFNQHRSPSPNRKDFVP-GHRKVKSLGSTQIFLQXXXXXXXXXXXXXXXXXXXXXXRYNLVDDSILEDNLNT---------------------DIRSSTSYDS----GLDHDEPETHPIIRSNYI----------SEDTKPEFY---FKLQGFLKRKTLKRNATSPKVANWQRYWVGITCSHLVYFLPKYRAFGGHDRNNFKENAEKILPLFGSDVCECNEEGS---FQLTDESGANVYRFRAGTNLNRKLWMDFIKEASNGGMKEPP 2256
            E  + ++ VVFDVLKV+ +E A Q+TL+D+P+F+ ++P+EL+SC W  K K+ + PN V  T+RFN VS+WV REIL   T K RAE ++++IK AKKL ELNNL+ L AVVSGLQ  PI+RL KTW ++ ++DK   EKL  ++ +E+N  +LR ++ + K+ PCIPYLG+YL+DLTYI++ +P TG +  + +R+N MN ILRII+D QQS  YD   +  VQ YLNSV+YI+ELQKF+ED+NYKLS +IEP          G++  R   S  D    + P+  AS      P+    S+  + A   LP TP      PSP  ++ +P GHRK  SLG   I   + +    ++   +           +L+DDS++E +  +                     ++   TS+ +     L H       + R+ Y           SED     Y     +QG L+RKTL +    P VA+W +YW  +  + L Y+  K  +    +R +FK  + K + + G  V   ++      F LTD    N Y+F+AG  +N  LW   +  A     ++ P
Sbjct:   33 ELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEP----------GTSTPRSAASRED---LVGPEVGAS------PQSGRKSVAAEGAL--LPQTP------PSP--RNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPR--------HLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVARNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAK--SLKATERKHFKSTSNKNVSVIGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLSAACQSNKQQVP 576
The following BLAST results are available for this feature:
BLAST of TCONS_00054288 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RGPS22.341e-10236.71Ras-specific guanine nucleotide-releasing factor R... [more]
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