TCONS_00054516 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054516
Unique NameTCONS_00054516
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2221

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054516 ID=TCONS_00054516|Name=TCONS_00054516|organism=Clytia hemisphaerica|type=transcript|length=2221bp
TTGTTAGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTGCACA
CGCAAGTTGGAAACCAAATTGGAAAGCTTCTGTGGAAAAGCTTTGAAAGA
GATGTCATCTATTAAAAGACAAGGTACCTCTTCAAGAGATCCAACTCTGT
TCCAGGGTTTATGTGGCGAAATAATGAGTTCAATGGCCTCCACAACACAA
TATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACACTATCCT
TCTAAACCATAATCAAATCAACCTCATCAACGACCCAACGAAATGGAAGA
TCATTAAAGGACCATTTGGGTCtgGTAAGAGTGTCTCCATGTACGAGATT
GCACGAAAACTTATGCATCAAACAGATCAACTTTATTACATTGCTTTTGA
TCCATTCTCATTGGTGGATTTAAAGTTCCAAGAGGGGTTCAACAACTTGT
GTGACGAGGAAAAACTTGACAAGTCCAAGATCAAAGCTTTTAGTATCGGT
GATGCACTAGAAGGATCAACAATCGATATTTCGGATGTTTACGATATGAT
GTATCCACCGCGTGTCAATCTTTGTCGAGTATTGGAATATCTTTATTCtg
ataaaacaaaacatttaggATTTATGATCGACGAGTTCCCTGGTGATTTT
CTCACAACCAAATACGTTGAAAACCTCAAGGAAAGCCTCGAAAAGAATTT
CCAGGATACGACTGTCATTCTTGCGCTCCAAAGTGTAGAAAAAAAACGCA
AAGTTATCAAATCAGGATTTTTCAATGACGATGTGAAGGAAGTTGAGAGA
TGCGACTACCATCAAACCGGTATGACAGTCTTCACTTTGGACAAAACGAT
GCGAATGGCAGTAAATATTCACCAGATGATTGAAATCTTTCAGGAAGAAA
TCGAAAAAGAAATCGTAGACGTACCTTTGGAATACAAAACACGAATTCTA
CGCAGACCGTACGAACCCTCCACCCGCAAAACAAGAAAAGCTACCAAAGA
TGTCCCTCTTAAGCCTCAAGAACAGAAAGAACAAAAGCAACCGAGACCAA
CAGATGACGCCAGTCTCCAAGATAATCCGAATTATCAAAGTGTGCGAAGG
AAAACCAACGTTGCCTCGTTCTACGATCCAGAAACATTGTTAACAGACAT
AAACGCTCAGTCAGGGTCTGTttccaaaaaactttcaacttcATTCTCTT
ATGTTCGTGGTCAAAGTGGTCACCAAATAAAAAGTGATTCAAAGCCCAAC
CTCATTTATTTGAACAACTTTAGATTCGACGTCAATAACTTCAATTCGTC
TGATGCAGCTTATTTGAGTGCAATTTTAAGAAGGCTGATGAAAAAGGATG
TTCAGTTAACCGTCATATGTGGTACAATCGAAGAACTAGCTATTTTGAAA
TATGTGTTTCAACATAATTTAGAGGTATCAGAAATAACAACATTTGCACC
GTCTTTAGCAGGAAAATATCCAACCAAAACAGAGAAATGGGAGGCTTTAA
AAACGGGAAAAGTATTACTCACATGTTATAGAGGTTTCAGAGGCTGCGAA
ATGGACCATTGTATTTTATTTGCTAGCCCTGAAGATAACGTTCCAAAGAA
TTTGTACATTGAGATGCTCACTCGAGCTATCAATTTCGTTGATATAATCG
TTCTTCCTGTAAAGGAATCAAGCACGGTATCTCGTTTGATTGgaattttc
gataaatggtTGCAAGCTGGTCTTGTTTCTCCTACACATACTAAACGTTC
AAGTACAAACATTACTTTCTCGTCATTGGAAGAGCTAGATGATACTACCG
ttacaaaacaaaaagagGATATTGTACCACTTGATCAAACCTGTGATCAT
AATGTTAAAAGACAAATTCTTCAAGTCATCGAGGATAGCTCGTTATTCAA
TCACTCCCACATCGATGCAGCAGTAAAgaaTCTGCAACAATTCAGGACTA
GACACTTCGGATACGAGCTCCGAGACACATCAGAACGACATTATAATGTG
ACAATCGATGGAAAAACATACGATTTTGATGatgtttggaaaattttgcg
cgaaaagaatttcaagaaattcgaagaaattttCCAACAAAATCCGAACA
TCGTCAACTCGTTGCGTGATGGTGGTTTTCGTGGTGGTGgttttggtggt
ggttcgacaCTTCTCATGAAGGCTGTTTATGAAGATCGTTTCGACGTTTT
CGTTCACTTGATGGAATATCC
Run BLAST on NCBI

transcript from alignment at scaffold_243:160831..174382+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054516 ID=TCONS_00054516|Name=TCONS_00054516|organism=Clytia hemisphaerica|type=transcript|length=13552bp|location=Sequence derived from alignment at scaffold_243:160831..174382+ (Clytia hemisphaerica)
TTGTTAGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTGCACA
CGCAAGTTGGAAACCAAATTGGAAAGCTTCTGTGGAAAAGCTTTGAAAGA
GATGTCATCTATTAAAAGACAAGGTACCTCTTCAAGAGATCCAACTCTGT
TCCAGGGTTTATGTGGCGAAATAATGAGTTCAATGGCCTCCACAACACAA
TATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACACTATCCT
TCTAAACCATAATCAAATCAACCTCATCAACGACCCAACGAAATGGAAGA
TCATTAAAGGACCATTTGGGTCtggtatgttttttttgtatttcttcaaa
aaacttcttatttttttttagaatttctgGTTGTACTAGTTCATAAATGT
CTTAATCCCTATTATCTCCAagctttttcgatttttcttgtCCAAGCGGG
TGGGGGGAGGTcaaatctaccaccctcgattattaaTATTCCACAAGAGC
TGTGGCCATGAAAATTGGTACAGATTTTCTCTATCATGACACaaatttcc
aagaaaaaaaagaaaattaatgacgtcatctaaaAAGCGATGACATCATC
AGAAATTTTCCAATTATCGGAGAAAAGCCCAAATTTATGGGTGACAAAAA
TGTCTGTCACAGTCGTTCCAACAAACAAAGGTATTTAAATTCTANCCCAA
ATTTATGGGTTACAAAAATGTCTGTCACAGTCGAACCAACAAACAAAGGT
ATTTAAATTCTGTtcaaagattctgaaaggttgttctttaacataattgc
cggttttgcagtttccataaagattttatcttaaaatctgtgcagaagat
gagtaaaatttttaaaatttgacgacgtcataaataatgacgttgtaatt
ttctttttttttcaattttttcaaattcatattgTCAAGGTCtgtcacgt
gtcaaaatttgaaaattattgcataaatatttcagaagttatcagcactt
taaaattaaGATTATCAGCCATTTTAGCGGGTTTCATGTCATTTTTCACA
ATAAAACCATACAACCtcatctggacaacctatgaccctaagaTTTGCTT
GCACAAGTactattaaaagtcagaaaattttatattgtttcaaaaatttt
tctccgagatatacgCAAACCAAAATAATCAGGAGTCATTCAGAAAATAT
TTTGGGGACATTTAATTGCAACGTAAAACATTTTgcatgaatttttttca
aattttgctgacgtcagcagaaatcagcaaaaaacgaaattttgcaataa
agtgtcgacgtcagcaaaactaaaaagaaaagtttttttcaaaatgatcc
ttcTGCTTGTGGCTCAAAACAGTTTCAATTCACTCCACCATCCACATCCG
ATTCTTTTCAATTATTTAATAGGTAAGAGTGTCTCCATGTACGAGATTGC
ACGAAAACTTATGCATCAAACAGATCAACTTTATTACATTACTTTTGATC
CATTTNCAATTCACTCCACCATCCACATCCAattgttttcaattatttaa
TAGGTAAGAGTGTCTCCATGTACGAGATTGCACGAAAACTTATGCATCAA
ACAGATCAACTTTATTACATTGCTTTTGATCCATTCTCATTGGTGGATTT
AAAGTTCCAAGAGGGGTTCAACAACTTGTGTGACGAGGAAAAACTTGACA
AGTCCAAGATCAAAGCTTTTAGTATCGGTGATGCACTAGAAGGATCAACA
ATCGATATTTCGGATGTTTACGATATGATGTATCCACCGCGTGTCAATCT
TTGTCGAGTATTGGAATATCTTTATTCtgataaaacaaaacatttaggAT
TTATGATCGACGAGTTCCCTGGTGATTTTCTCACAACCAAATACGTTGAA
AACCTCAAGGAAAGCCTCGAAAAGAATTTCCAGGATACGACTGTCATTCT
TGCGCTCCAAAGTGTAGAAAAAAAACGCAAAGTTATCAAATCAGGATTTT
TCAATGGTAGGTCATTCTTAAACTTTGCGTAGATCAAAAAAATCATCACT
TTTCGCTCATATTTCAATTTGTACTTTAAAGAAAATACGATAGATTCTAA
GCTAATAGAGTATACCTTTAGACCATATCTTTTATTACATGGGTTAATTG
GAAGAGAATGTTTTGCAAGTCTTGCATAtcctaccagtggatacccctta
agaCCGCATActccttaaaacctacaaagttggGTTTTGGGCTCTCTTAA
CTACCAGGCCTAATTTTATATtacatatttcactttttagAACCTCTTAT
ATAGGTACTTTTATAAAATACCAAACTTCAACAATTTTGATTATCGCAAA
GTGTCGTAAAATTCAAACTtactcaaaattttatcaagaatcccttcaaa
aaatctagtTTTTCGGACCTAGAGATTAAACAATTGAGTTTAAGGTTATA
AAACCTAAActtgtttcttattttttcacgaagcaataaaaactttctta
gcagcttttacaaaaagCATACTCAGGGAAGAAATCATAGATAGCCTAGA
CTCaccatttctatttctatttctttattagcatgaactttttacaagtt
attttcgctaatggaacaaaaaataaataaatgaaaaaatattaagtaat
TTACAGATTATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATT
CAATAATTAAAAAGTCTAAAATCAAAAGACTAAGATAAAAAAGAGCTAGA
TTTAGGCAGATTCGAGAAGTCTAGTAGTATATTGAAGCTGAATGTGATTT
CTTTCACCAGAAAATGTTTCATTACACCACAGTTTTCTCTATCAGGTTTT
AAGGGGTACGTATCCATTGGTACTTTGCTTTTGAAGCAAGCGAACCATTC
ACTTCATTATGCAATATTTTGCATTAAAACGGTTGCTCAAATTATATTTA
ACTTCCTTTTGTAGACGATGTGAAGGAAGTTGAGAGATGCGACTACCATC
AAACCGGTATGACAGTCTTCACTTTGGACAAAACGATGCGAATGGCAGTA
AATATTCACCAGATGATTGAAATCTTTCAGGAAGAAATCGAAAAAGAAAT
CGTAGACGTACCTTTGGAATACAAAACACGAATTCTACGCAGACCGTACG
AACCCTCCACCCGCAAAACAAGAAAAGCTACCAAAGATGTCCCTCTTAAG
CCTCAAGAACAGAAAGAACAAAAGCAACCGAGACCAACAGATGACGCCAG
TCTCCAAGATAATCCGAATTATCAAAGTGTGCGAAGGAAAACCAACGTTG
CCTCGTTCTACGATCCAGAAACATTGTTAACAGACATAAACGCTCAGTCA
GGGTCTGTttccaaaaaactttcaacttcATTCTCTTATGTTCGTGGTCA
AAGTGGTCACCAAATAAAAAGTGATTCAAAGCCCAACCTCATTTATTTGA
ACAACTTTAGATTCGACGTCAATAACTTCAATTCGTCTGATGCAGCTTAT
TTGAGTGCAATTTTAAGAAGGCTGATGAAAAAGGATGTTCAGTTAACCGT
CATATGTGGTACAATCGAAGAACTAGCTATTTTGAAATATGTGTTTCAAC
ATAATTTAGAGGTATCAGAAATAACAACATTTGCACCGTCTTTAGCAGGA
AAATATCCAACCAAAACAGAGAAATGGGAGGCTTTAAAAACGGGAAAAGT
ATTACTCACATGTTATAGAGGTTTCAGAGGCTGCGAAATGGACCATTGTA
TTTTATTTGCTAGCCCTGAAGATAACGTTCCAAAGAATTTGTACATTGAG
ATGCTCACTCGAGCTATCAATTTCGTTGATATAATCGTTCTTCCTGTAAA
GGAATCAAGCACGGTATCTCGTTTGATTGgaattttcgataaatggtTGC
AAGCTGGTCTTGTTTCTCCTACACATACTAAACGTTCAAGTACAGACATT
ACTTTCTCGTCATTGGAAGAGCTAGATGATATTGTAATNatacctttttg
gaagcgtattagggtgtagaatatgaaaagtgctgttcaataattgtttt
tcttgcctaaataaagatatatgaataaatattgcaaaaaatacaaaaat
gctgacgtcagcaaaacttaatttttgaataacttttgattggcttaact
ttagatgctgaaattttaaaCGAAAGTAGGACATTATGAATAGGcacatt
ttaaattaaaaaatattttgaaattttgctgacgtcagcatatttttgca
aaaatgcgttttttacttatttctgctgacgtcatcaaatttcaaaaaaa
aactttgatccgaaatgtgcttttcaatattttcttgcattctgcaaaat
ttcagcatctaGAATAAGCCAATccaaagttatttaaaaaataagttttg
ctgacgtcagcatttttacattttttgcattatttatcaataaatcttta
tttaggcaaacaaaacaattatcgaACAGCACTAttcatattctacaccc
taatacgcttccaaaaaggtatgaatgaacacctcttggcgagtgctatt
ggtgtttaaaaattacggaAAATTTGGACAGGCCTTAAAATGCCTGAGCT
ATTAATTTCGTTGATATAATCGTTCTTCCCGTAAAGAAATCAAGGTGGGT
CAAAGCTGGTTTGATTGGAATTTTCGATAAATGGCTGCAAGCTGGTCTTG
TTTCTCCTACACATACTAAACGTTCAAGTACAAACATTACTTTCTCGTCA
TTGGAAGAGCTAGATGATACTACCGttacaaaacaaaaagaggTAAGTAA
CAGATTTGAGAttaccaaaaaattgttttattaaatGAAACGCGCATGCG
TTGATATCTTTCGTTTGATAGATGgtaaaacggttttttttgttgttttg
taacGGCAGGATATTGTACCACTTGATCAAACCTGTGATCATAATGTTAA
AAGACAAATTCTTCAAGTCATCGAGGATAGCTCGTTATTCAATCACTCCC
ACATCGATGCAGCAGTAAAGTAAGTAGAATTTATTGTATATCGGTACTTC
ATATACAATATTCACAGTAACCCTTATAACATAAGTTTTTTAGTATATTC
TCGAAAGTTTATTACTTACAATATAACCTACACTAAGTACGTAAAATCAT
TACTTCATAAAAAATCGAAGATACAGAGCACATATTGTGAGAATGATATT
CTATCCCATATCATATTTTATCACCTGATAACATCACTGTAAATAACTAG
TCTTGTGATACCAAACGGAAgcatatattttgaaaacgcgttggtttttt
tttttttaattatcttttcttattttttcaggaaTCTGCAACAATTCAGG
ACTAGGTATAtttccaatgaaataattttcaaactgtCTTAAAGGTCGTG
CCCTTTTTGCTAAGTATTTAAGGATATGTAACTAGTTCAAACTCTACCTC
CAGATTGTAGTTACCCGTTCAAGGCTTGTTAGGTAACGAAAGGCTCCTTT
ACCTTTTGATTGCCAGAAAGAGTATCGTTTATCCACTCAAgcatcatcat
ttttttctataGCGCAAAAACTAAACCTTACCTGTCTTCATTAAAAAGAC
TGTTTAGATANACGAAAGGCTCCTTTACCTTTTGATTGCCAGAAAGAGTA
TTGTTTATCCACTCAAgcatcatcatttttttctataGCGCAAAAACTAA
ACCTTACCTGTCTTCATGAAAAAGACTGTTTAGATGTCGGTTATTTTTGG
ACGTACTGTATGGAGCGTTTTACACTCCGAGACTGAACTCTGAACCCTGT
TATTGAAGAGAACGTGGCGGATCGGGTTCGCATCGTAAATGACGATGTAT
GTGCATGTAGGTGGTGGATAAATTAGTAACTAGTTTCTTTAATGCCAGAA
TTACGCATCAAGGCTAACTGTGACATTACTGGTTGCGCATCCTCGCAAAT
TGTCCCAAAATTAAAGAATACCATAGGCAAGCAAAATCTTAAGCAAACTC
TTACCCGTCCCTAAGCATGTCGAGGGTAAAGATAAGCAGGgaaggaaaaa
atgaaaatgtaggaaaacacttttgaaaaattccatttCATCTTTCCTTG
TTTTGCAGACACTTCGGATACGAGCTCCGAGACACATCAGAACGACATTA
TAATGTGACAATCGATGGAAAAACATACGATTTTGATGGTAAgtttaaat
ttttggaaatgagCAACGCACTGTCAAAAATGCTGTGTATATGTTAACGA
TGTACTTTTACTTTCTTGGGAAACGTTCATATTCTTTTACTCTTGGATTC
CAAATAAAccagggggttggaaattgtattATAATCAGGCTATTAAGAGA
aaaataagggaccttctctttgaaacctataaatattcttaaaaattaaa
aaaggggGGTGCTAATGAGGTCAGGGGGTttggaaattttcgaaaaataa
ttaAGCGGGGGGGTTTATTtggaacaaattaaaaaaaacattttattctt
CAGATTAACTTCTTGACGTCCCATCAgcgaaatttttttctcttaggACC
GATATTTTCGGCTGCCGGTAGTTTTGATTTAGgactttattaaaaaattt
gacacactgAAAAGATGGAGCTTTGAAAGATTCCAACGGTACTAAACATT
AAGGCTTTAACTATCACCAAACCCTGCTATCACTAAAGCCAAGATAATTC
GATTTAAAGTTTAAgcattaaaaaatctttaaaatgcgATTTTTTTGCTA
TTTGAGAACGGGAGTTAAGGAGTACTTAAGTTTAATGAGAACAATCCGAA
TCTTTTTTGGAAGAGTAATTTTCCAATGATGCCAAAAATAGCTCATAACT
CTTAGAATCGACCCACAATCAGGGGGTGCTAGAGTTGGACaaatacaatc
atggtcgtaatatttgaggaaaaagggaaatccaccgggaagttttgaaa
ccacaatcgatttgtaagtgctctaaagtaggttggaggggtagagtttt
aactctgagttctaacatgagacttaacacttaggaccttaggatctgag
gataggaccttaggatctgaggataggaccttaggatctgaggatccaaa
agttcaaaaatagtccaatagggctcataatatagcctggtggtctataa
acccgagccaaattgaaatatcctattaaatttaagagatggcccaaaat
cgacttcctcgcccgaactccaaatttcgaaaaacgaggaaatgaGTTTA
gttctcaatagatttcgaccatgattgtagaaagaaaaacttttcttttt
caaaataaagcacGCACAAAGGGTTCAAGAACAAGAACGAAATAGCTGcg
aaaagtctttaaaaatatttttattcagcCAAAGCCAATACAGTGTAGAA
TTTATGCCGGGGGTTACTAAGTACTGACTGACATGCACCGCAAGGGTCGA
TTTTCTTTCACGCTAATTTACTCAAATTCtgaagtaaccagtcattttct
tgtcTGTAAGCTTTATTACACCGGATTTTTTAATcatgctgaatgagatg
cctttaatatgaatagatagaatttatcagttggaaaaaattggaaaggg
cagttttagagatgaatctaatcaattattcttttgtctttttgatgACA
AAATGAATAATTTGGAACAGAAATAAGTGATCTGATGATTAAATACAAag
cttttcaaaagaatttcagTTTTCATCGCTAATCATTATGACGCTGATAG
TACAAAAGGATAGAATTGACACCCTTTTCAGGGCCCCCCTTTTCAAGTTT
CAAGAATGTCGAATTTTGCATTTTGCACGTGACTCTAATTAATtatatga
gacaggggtgagctaaCTTAATACAATATATTCAAATGATAAGGAgagac
cattgagtttaaagcccgaagggctagagtagaatctctaacctttctca
agcaagagatagtgaaaccttaaaaaatgcgccgtatttttgacgacaga
ttgaatctagcaattcctttgtttacgattgatatttttttcgcaattta
gcggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggcgaaac
gctcaaggccgcgcaactttcggatgagctggagtttttacaacgtCGGC
CATGATTTTCGATGTGTATTTCACAGAGCGCAAAAACTGAATAAGTTGAG
ATATATTCTATCTGAAAAGAACATTCACCAaccgaattgaaatatatcaa
atttctatcagaaaaaaaattttgtcccgaagtcccgaaatgTCAAACTt
atgaaaagaaaattacaccaaacaaaagtcccgaggtctcgaaagtcccg
aattgaactatatcaaatttcaaagaagaaaaatacaCAAACCTAAAGTC
TCCAGGTCCCGAaagtcccaaattgaaatatatcaaaattctaccagaaa
aacaatttttacaccaacctaaagtcctgaggtcccgaagtcccgaaata
tcaaacttatgaaaaaaaattacacaaacctaaagtcccgaggtcccgaa
agTCCCGAATTATAATATATCAAAATctaccagaaaaaaaatttacacca
acctaaagtcccgaggtcccgaaagTCCCGAATTATAATATATCAAAATc
taccagaaaaaaaatttacaccaaCCTAAAGCCTCGAAGTCCCGAATGGA
AATTTACCAAAGTATAGTCTGAAAAAAGTTACCCCAATCAAAAATCCCAA
GGTCTCAAAGTCCCGATGTAAATATGAAAACTCAAGTAGAAAGAGGACCG
GGGAAATGACTGATTGATTAAATTTGATTGGGCAGGGGTGAGATTGATGA
AATAGACAAGGGTGTAATTTCCACACAAAGTTGGGGGAAACTCAAGTGGA
AAGAGGGGAGAGTTTAGTGAATTTTACATAAAGAAAGAttggaaatctat
caaaagaGGCGGGGTGAAAAAGGGGCGGAAACAATGAATGATAAATTGAA
TagagtgagacaggggtgagatTAATGAAATGGAcaaggataaaattttt
acataagGAAGGAAAACGGGTGGGGTGGAACTAGAGTTGAAAAAGGACCG
GAGAAAAAGAGTGATAGATTAGACGGGGGATCGGATTGTTGAATTAGGCA
AGGGTGGGATGAAATTCAAGCAAAAAGAGGGGCTTGGATAAATGATTGAT
GAAACACGAGATAAGTGTGAGATGACGCGTAAAGAGAGGTCAGAGATATA
CATGAAGACAGGGGTGAGATAGATGCAAAGGGATAAGGGAGGGTGAGAAA
GGGGTGAGATGGATGTAAAGGGAGGTGGCAGTAATAGTATGAAAAGCGTA
GGGGTAAAAATCAATTAAGACGAGACATGGGTGGAAACTTTCGCTCtcag
aaatttgatatatttcaattcgggacttcgggacctcgcgacttttggtt
ggtgtaatttttttttctcagaaatttgatttattgaaattcggGACTTT
GGACCTCGGGTGTTTaggttggtgtaattttttttctcagaaatttgata
catttcaattcgggacttcgggacctcgggacttttggttagtgtaatat
tttttttcagaaagttgatgtgtttcaattcgggacttcgggacttttgg
ttggtgtaatatttttttccgaAAGTTGATGCATttgaattcgggacttc
gggacttcgggacttcggtACCTAGgtatggtgtgattttttttaaatag
atttttgatattttgcatttcgggacttcgggactttggGTTGGAGTAAT
ATtgtttttcagaaacttgatgtatttcaattcgggacttcaggacttag
gtatggtgtgattttttttaatagattttcgatatattgcaattcgggac
ttcgggacctcgggactttgggttggtgtaatattttttttcagatagtt
gatgtatttcaattcgggacttcgggacttgagtatggtgtaattttttt
aaatagattttcgatattttgcaattcgggacttcgggacctcgggactt
ttgattagtataatattttttttcagaaactcgatttattgaaattcggg
acttcgggaccttgggacttttggttggtgtaaattttttttgatagaat
tttgtcatacttcaattcgggacttcgggacctcgggacttttgatTGGT
GtactttttttctcagaaatttgatttattgaaatttgGGACTTCAGcac
ctcgggacttttggttggtgtaattttttttctcagaaatttgattcatt
gaaattcgggacttcgggaccttgGGACTTGAGTAtggtgtaaatttttt
aaatagattttcgatattttgcaattcgggacttcaggacctcgggactt
ttgattagtgtaatatttttttcagaaattcaatttattgaaattcgggA
CTTTGGGACCTTgggacttttggttggtgtaaatttttttgatagaattt
tgacatacttcaattcgggacttcgggacctcgggacttacttttggttg
gtgtaatattttttttaagaaagttgatgtatttcaatttgTGACTTAGG
GACTTCGGGACTTGAGTATGGtgtaatattttgtaaatagattttcgata
ttCTGAATTTCGGGactttgggttggtgtaatatttcttttcagaaagtt
gatgtatttcaattcgagacttcgggacttagggatggtgtgatttttta
aaatagattttcgatATATTGCAAttcttcgggacttcgggacctcggga
cttttgattagtgaaatatttttttttcagaaagttgatgtattttaatt
cgggacttcgggacttaggtATAGTGTGGTTTTTTAAacagattttcgat
attttgcaattcggggcttcgggacctcgggacttttgattagtgtaata
tttttttcagaaattcgaTTTATTGAAATTCGGGACTTCGAGACCTTggg
acttttggttggtgtaaatttttcttaatggaattttgacatacttcaat
tcgggacttcgggacctcgggacttttggttagtgtaatattttttttaa
gatagttgatgtatttcaatttgggacttCGGGACTGAGTATGGTGTAAT
tgtttttttgatagaatttcgaTATATTCAGTATTTCAATGATTGTAACT
TTGTAATTTTAAACATTACAGTAAGAAAGGATGAATTGGTGCTGTTCTGC
AAAATTCAGCATTTCTCCAGCTTGTCCCGcaattttggtaggatttgttg
acttcaaatcctaccaaagagattgacttctagcccttcgggcttatact
tcattgggagAGACACTCTCCCGAAGGGGGGGGGgccactcatatggtcc
gatcCACGGCATGTGTTTTTTTTGAGACTCTCGAAATGCAAAGTGTGTAC
TTTTGATATAGTGCATTATAAGgatcttcttttagctggaaaCAATGTAA
GTGCGTTTGTGTTTGGGACTGCTGAATCGCAGGTCTGACAGTGAAATTTT
TGAATCGCTGCTATTTTCATTCGTTTtcccctccccccccccgtaaaagg
aagaaaatctttttacgATATGGGAGGTCTCTAAAAAGTATCAAATGAAA
TTGACAGGAGTTGTCAATTTTNttttttttcttctttttttctttctttt
tgcccATTCCctccttcccccccccccccccgtaaaaggaagaaaatttc
tttacGATATGGGAGGTCTCTAAAAAGCATCAAATGAAATTGACAGGAAT
TTTATCCCCGAGGGAGTTTCTTAATCATATAAAGAGATTTCTCTGGTGCG
TTTTTCATTCATTTGTTATTTAATTCATTGGGGCTTGTTGAGTGGTTGTT
TGTGTACGCATAGAAAGTTAATATTATTTTTGGAATGTTGAATAATATTT
TATCAGGTAAAATAATTTATTATACAGTAGAAAGAATTTCTTTGTCAGAA
TAATTTCTGTAGACATGTTGAAAATGCTTGTTTTCTCTGAGAAATGATTT
CTCAAAGTCTGAGAAGCGACTTAGATATTCATCTAAAGTTTACCTTTTTA
CCCGAATTTAAATAGTTTTTTGAATTTCCCTCTTGGAAAAAAGCCATTGG
GATAGTGGGTGCCTTTTACAAACAAAAACTAAACGGTACCTTTCTCGTTT
TTTCCTTCAAACTTTTAAGTCCAAAAGAAAAGTGACGGAATTAAATTTTT
cggttttaaaggttttgccCTTTTCGTTGAAATTAATACCATAAATCTGA
AAAGATCTTAATTTTGTTGCCCGAAATTTAACTTACAATAGTGGGATtgg
agtttgttttttttttaattttttttttttttgtattctcAGCgtagaaa
ttttttgttcatcaaaaatatCTTCAGCCCGAATAAATAAagtcttttct
tttcaaactaAATGGAAATTCTAATTCCAAAATTTCAACTTCAAACAATT
CTTCGCTCGGAAGatatcgaaattcaattttatttttcacggAGGAGATT
TTTCCCGTTATAAGTAAAATGATTTTTCACTGAGCAAAAAGTTTTCgtcc
aaattttaaaaactttttgccATCAACNCGTTATAAGTAAAATGATTTTT
CACCgagcaaaaagttttttactatattttaaaaactttttgccatcaat
tcggaaatatttttgttgttcagattggaaaatttcagctttaaagtatt
tttagttcttgagatatcgaggttaaattcttttttaagtGGAAATATTC
TACCGTCaagaatgaaaatgatttcttgctgagcaaaaagttttccttca
aaattcaaaattttttcgccATCAATTCGGAAATATTTTCTTCGTTctgt
ttgcaaaatttcagcttcaaagtatttttagttCTTAAGATATTGAggtt
cattttttttgaaagttttttttacctcgggaaaagtttgaatttcttca
ttttttcttcagatgtttggaaaattttgcgcgaaaagaatttcaagaaa
ttcgaagaaattttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGA
TGGTGGTTTTCGTGGTGGTGgttttggtggtggttcgacaCTTCTCATGA
AGGCTGTTTATGAAGATCGTTTCGACGTTTTCGTTCACTTGATGGAATAT
CC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034374XLOC_034374Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054516-exon-scaffold_243-1491911889:160831..161154TCONS_00054516-exon-scaffold_243-1491911889:160831..161154Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:160831..161154TCONS_00054516-exon-scaffold_243-1510915933:160831..161154Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:160831..161154TCONS_00054516-exon-scaffold_243-1575043694:160831..161154Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:162384..162836TCONS_00054516-exon-scaffold_243-1491911889:162384..162836Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:162384..162836TCONS_00054516-exon-scaffold_243-1510915933:162384..162836Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:162384..162836TCONS_00054516-exon-scaffold_243-1575043694:162384..162836Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:164145..165104TCONS_00054516-exon-scaffold_243-1491911889:164145..165104Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:164145..165104TCONS_00054516-exon-scaffold_243-1510915933:164145..165104Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:164145..165104TCONS_00054516-exon-scaffold_243-1575043694:164145..165104Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:165893..165972TCONS_00054516-exon-scaffold_243-1491911889:165893..165972Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:165893..165972TCONS_00054516-exon-scaffold_243-1510915933:165893..165972Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:165893..165972TCONS_00054516-exon-scaffold_243-1575043694:165893..165972Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:166090..166199TCONS_00054516-exon-scaffold_243-1491911889:166090..166199Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:166090..166199TCONS_00054516-exon-scaffold_243-1510915933:166090..166199Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:166090..166199TCONS_00054516-exon-scaffold_243-1575043694:166090..166199Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:166512..166535TCONS_00054516-exon-scaffold_243-1491911889:166512..166535Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:166512..166535TCONS_00054516-exon-scaffold_243-1510915933:166512..166535Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:166512..166535TCONS_00054516-exon-scaffold_243-1575043694:166512..166535Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:167289..167368TCONS_00054516-exon-scaffold_243-1491911889:167289..167368Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:167289..167368TCONS_00054516-exon-scaffold_243-1510915933:167289..167368Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:167289..167368TCONS_00054516-exon-scaffold_243-1575043694:167289..167368Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1491911889:174193..174382TCONS_00054516-exon-scaffold_243-1491911889:174193..174382Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1510915933:174193..174382TCONS_00054516-exon-scaffold_243-1510915933:174193..174382Clytia hemisphaericaexon
TCONS_00054516-exon-scaffold_243-1575043694:174193..174382TCONS_00054516-exon-scaffold_243-1575043694:174193..174382Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:160831..174382 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.034906	0.0488841	0.142031	0.346929	0.596214	1.1263	0.515343	0.346587	5.31952	4.55237	10.5601	12.1404	7.06217	6.21441	4.98446	5.89968	2.54202	1.5565	2.69428	3.89307	5.01868	5.42289	13.789	8.5783	14.2235	13.2842
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054516 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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