TCONS_00054600 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054600
Unique NameTCONS_00054600
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1095

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054600 ID=TCONS_00054600|Name=TCONS_00054600|organism=Clytia hemisphaerica|type=transcript|length=1095bp
ACAAGGTGTTGTAAACATACACGAATTAGCATATTAATATTTAGATTTCA
TTTAGGCAACATCGGTGAACTTTTCACCCAAATACTTGGAGAAAAGGAAT
GAGGTTGTCAAGACTCCAGGATTGAAAACACAACGCTCGATATCAGTTAA
CTCGatgacgtcattcaaCAGTCCTTCACAACATTCTCCAAAGATGAATG
AGGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCT
TTCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTA
TAAACATGGGGAAACCAACCCCAACTGTTGTGAAATGcattattttagtg
aaaaccaAATTTCAACACTGGTTGAAAAATGTCCCTTAGagATGATCTAT
TTGACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGA
TTCATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATGG
CTGCAATCAATGTTCAAAAACCTGATAATGGATTTTATATAAACGATGGA
CTCTTCATAAAATCTAATGGCACTGGATACGTTCTCAAGCCGTCACAGAT
GACAACAAAAGGATCTACATATCACCCTCAGATGACGAAACCGGCTACCG
GTGATTTTTCACAAAGAATGAAAATCGAGATCTTTTGTGGTCAGTTTGTT
GAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTAT
CGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGCCGTCAAATA
ACCTGTTCAATCCTGTTTGGGAACgaagcactttcactttcgatttatCG
TTACCCTCAATGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGT
CAACCGATTAGTTTAAAGACAGGTAATTTGTTTTGATAGAATTTCCCGGG
TACTAAAATCTCGGATTGAGGTCATCCCTGAGTATTTCCATGGTCTTTGT
GTCTTTTAACTACCTATGGCTATTTGTTGGTGAAATATCCTTACTAATTG
TCATCGTTATCAATAAACATTTTAAACTTGTCCTTGGAACGttct
Run BLAST on NCBI

transcript from alignment at scaffold_243:186148..198603-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054600 ID=TCONS_00054600|Name=TCONS_00054600|organism=Clytia hemisphaerica|type=transcript|length=12456bp|location=Sequence derived from alignment at scaffold_243:186148..198603- (Clytia hemisphaerica)
ACAAGGTGTTGTAAACATACACGAATTAGCATATTAATATTTAGATTTCA
TTTAGGCAACATCGGTGAACTTTTCACCCAAATACTTGGAGAAAAGGAAT
GAGGTATGTAAATGATTGAAAATAGTTTGTTACGTAATAGTTATCGGACA
GTTGTGAGTACAATATGAGAAATATTTTACGAGCTCCGAGCTTTTTCCGT
ACAACATTTTCCGAGCCTTTAGGCGAGAATGAGTAAAATATTTCCATATT
GTACGAGCAAAGGTCTGATAACTGGTTTATCTGTGACCCAAAAAATACAT
TTTTCTGTGTTGGAAAAAAGCGGTCCGGTAGAATTAGCCTGAGACCTGGA
CAAAATTCCCAACAAGCTGAAATTTTGCACAGAGGTCCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGT
CCAGTTGAAGGTGGTGTTTCCGTTGAAGGTGGTGGTCCAGTTGAAGGTGG
TGTTTCCGTTGAAGGTGGTGGTCCAGTTGAAGGTGGTGTTTCCGTTGAAG
GTGGTGGTCCAGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTGTTCCCGTT
GAAGCTGGTGTTTCCGCAGGAACAATAAAAAACTTTTTTGAGCAATATGC
AGCCGATAACATGGATAATAATCTGAGAACTCTAACAGGAAAGGGTACGT
TTCACGGGATGGGGATAATCTCCATGTCTACAAATGGTGCAAAAACATTC
CAAGCAATCAGACGTTTGAAGAAAAACGAGAAAAAACAAACAACGGGATC
CGTACCAATCATTCCTTATTTTGGATCTCATGAACGTGGCTTGTCAAAGC
TAAGATTCAAAAAGATTAAAGATCTTTCTGAGAGTTTCAAAGATGACGTC
ATGCACTATTACCAAGAGAAGACCATCGACCTTGTATGGCAATTAGCATG
GCACTTTAAAACCCGAGAATCTGCTAGACCGAATTGGCAAGGATTTATGC
AGACTGCGGCAGTACCAGAAAATAGCGACAATCCCGTGTCAAAGTCGTCC
ATAACATTCTTACCCATCATCGACCTCAGTTCATCTGACGAAACTTGCTT
ATACTCAACACTTCTATTCATTAAAGACGAAGCAAAGAAGCACAAAATTG
AAGTACCCTGTATCACCTTTGATCAGCCTCTATGGCAGAAAGCTATCGGG
ATCATACAGGATAAAAATTTGGTTATTGTGTGTCGTCTTGGTGGGTTTCA
TACGTTACTTAATAACAAGTTTCCTTGGTAGTATTGGGAAATTGATGATG
GGGTCTGGAATTGAGGAATTGTTTGAAGAAGTTTATGCTGAGGATACTGT
GAAACACATGACATCAGGGAAAGCCTATGCTAGGGCATATTACGAGTTCA
TTTGATGACTCAGAGTGTACTTGTGGAGCACCTCGTTGAAATCATGGATG
ATGAAGGAAAACTGCTCCCCATCAATGATTTCGAATCTTGCTACTCAAAA
CTTCTGAAAGGAGAGTTGGCAGTTGAAGATCTAGTTGAGTTTGCCAATGG
AGAAGGTGCAAAATCCTTTGAAAAGGAGATGAAGAAATTGAGTGATCGCT
TGAATGAAGATTCGAGAACCGCCAAACTATGGATCCAATATATCAACTAC
ATCGACATCGTCAAAGATTACATTATTGCAGAGTGAACATCCGATTGGAA
CTTCCATCTGAAAACTTTATCTAAAATGCTGAATCTTTTTGCTGCAACAG
GCCACGTTAACTACGCGAGAAGTGCAAAAATGTACCTCCAGCAAATGCCA
GAACTTAAAAAAAAGTACCCGTACCTGTTCGAAAAATTCTCCGCTGGTCA
ACATGCAGTGAGAATATCAAACCGCTACTGGGCTGGCTTGTGGTCTGACC
TAGTTATTGAACAAACGCTTGTGCGGTCTGCTAAAAGTCGAGGTGGGCTT
ACGCGAGGACAAGGAATGGAGGAGAATGTTCGTCAACTCTGGATTTCGAG
TATGAGCTATTGTGCAGCTGTCCATGATTCTATGACAACTTTGACCGGGG
TGAAAGTAATAAGTAGCGATCAACATCAAGAGATGGGGTTTTCCCGGATC
AAAACTGACAATGAACAATGAAGTTCTTCTGTTGGGTGGAGAAAAGGAAC
CCTTTCATCTTCAAAGATCAGCACCTACATTCGCTTTCATCAGGCGTTGT
ATCAATGAAAAACAAAGACAACGTGAACTGCGAAGAGGCCGAGAAAGTTG
GTAAGAAGTTCCAGGAAACTATCGATGAAAAGGCCTTCACGGACGCCAAA
CTTAAACGGAAAGACGAAGTGAAATCACTAGCAGTTATTCAAAATACGAT
AATTGTCGATGATGAACCAATAGCAGTTGACTCGACAAGCCTCTTCACTC
GCCTGGTGGCTGTTTCTCAAAGAGAAGAAAATGTGGAAAAGTATTTTGAG
TACGAGCTGACACAGTTTTTTTCTTTAAAAAGAGGATTGATGAGAAAACC
TGACAAAGCATCACTGAGAAAGCTAATTTTACCAGAACAGAAATCTTGTG
ATCGTTTGTCAAGTGGCTAGTTTGTTCTTGATGGTGGTGCTCTGATACAT
ATAGAGTCAGTTGGAGGAAAGGCATCACATTCATGGAAATAGCCTCATAT
CATGTCAGCTATGTGAGAGCCAACTATGGTACGTGTCGTGTCGTTTTCGA
TGGCTACNGACTCGACATCTGCTATATGTGGCAAGGCCAAAGTCAGTTTC
GTTAATCAAATCAAGAAATCAGAAATTTTGGGCGAAGTATCTGAAGCCTC
TACTGACTCTCAATCGACCAAGGAACAAATTCAGGATGTCTCAATCGTAG
CCTTCAGAGAGATATATGGTGGAAATCATGATAAATCACTTTCAAATTTA
AGGTATAGTTTACATAACAGTGTAATATGTACAATAAAATGCAACCATTC
TAACATTTAAGTATTCAAATGTCCATATGTATCAGATATTTTTATGATAA
TTGGTTTCAATTTCGACCACTTCAGATACAACAAATACCTTGAGATGCTT
TGCAAAGGATTAATTCAACCTGAGCGATTGCCCCCCCCACATCTGATGCT
GCAACGCAACATGGTGCCAGAGTTCACATCCAGGTAATCACCTCTGGCTG
ATCAAGTGCGAAACCAAAACCAAACAATTTATGAACTATAATAGATGTCA
TTTTCGTTACTTATTTAGGTGATTTGGTGGAAAGAACTTGATGAGAACGT
CTTAGACCCAACAAAATGGGGTTGGCAGGGCTCTGATACAGGTCTTCGTC
CAATTAGAACCATCAAGTCAGTCGCGCCACCCGAAATTCTCAAAATTATC
AAATGTAAATGCAAGATGTCCTCTAAGAATCCTTGTGGAACAAATCTTTG
CTCTTGCCGGAAAAATGGTATACCATGTATGCCTGCGTGTGGTAATTGCC
ATGGCATGGATTGTAACAATAAAACGGTAAGATTCCATAACCATTTAAGT
CTAGCCGGGCCAGAAAGCTTCTTTCTTAATTCTTATATNGTACCATGTAT
ACATGCGTGTGGTAATTGCCATGGCATGGATTGTAACAATAAAACGGAAA
GATTCCATAACCATTTAAGTCTAACCGGGCCTGAAATTTGGGGCGTAAAT
AAAGCTTCTTTCTTAATTCTTATATTGATGGTTTTCTCAGGTGGAAAGGG
ATCAAGACGGCGAGGAGATACCAGACGAAACAATACACGAAGCAACATAT
GACACGACAAATGAAACAACAGAGGAAAATCAGAACGAAACCTTCAATAA
CTTTTACGATGATAGGAATATTTTTGATTTGTTTGATTGAGGTCCTTGAA
AAACGAAACCGATTGTCCTTTATTTTTTATTGATAATGTATCCACTTTAA
GGCCTCATTAATCTTTGTGAGATGATTTTCAGGTTTCTTTGTAGGCAACT
TTTTTGTTCGTATTGAAATTATCTTTCTTTTGATATATGACACTTGCATA
TTTTGAGAACTTTTTTTTCAAGTTTTTTTTTCGGACGTGTCCGAAATTAA
ATCGTCCGTAAAAAGTTTTCCCATGTCCGAATCGATGGGGCTTTTTTTCT
GGTAGTCAAGTATCCTATTGGGGACCTATGTACAAAATTTCAGCTTGTTG
GGAATTTTGTCCAGGTTCTGGTGAAAATTTACATAATTCTACTGGACTGC
TTCTACCGCTACAATGCAACAACATCTTTTGGTCAATTTATATTTTGTAC
ATACAAAAATACAAAATACAAATACAAAATACAAGATATATTGTACTCTT
TTTAACCAATCAGATTGCTAATATTTTTTGGATCGCCGATAAAATTGATT
AATTTGAATAAAATTAACACTTTGACTTTGAGCTAGTTTGGAATTTTGTG
ATTTGCTTTTTTCAGTCTTACTCATAATAGGCATTTGATTATTTGACCTT
TCGCAACGTAAAAAGTACCGCCAAAATTGCTAAAATATGTTTACAATGTA
TTAATTCATGATATGCACCACTGGAGAGTCTTCTGAAAACTTTTAAAATT
CTCCACCCAATACGTCACTTAAACAATAGAAAAATTGACGTATTGGGTGG
AACAAAAACAGAAAAGTTGCATAATTTTGTGAAATCATTGCGGTGGTACA
TATCATGAATACCAATAAACACGAATATGCTTTATGTGAAGGTTGTCAAG
ACTCCAGGATTGAAAACACAACGCTCGATATCAGTTAACTCGGTAAGTAT
GTTTTACTCTTATTTTTGAAGAAAAAAATGAGCCTCAATACTCCAAAGAA
AAAGGGAATTTTAAGAAGTATAGCATGAATGAATTCGAAAGGTCAAAATT
AGGTGTAAAATAAGGTATTAAACCTACGAGAAAGTTTCGGACAGTTATCA
AGTAAATTTAGAATTTTCGGACATGTGTATAGTGCTACACTAAGAGATAT
CTTTACACGTGCATCATAGCTGGTTGAGACGGCCAGCTTTCTGATCTGAC
ATATTCTAAATGTAACATTTGACAACAGTTAAGATCGTGAATTTGACTTG
AAAGAAGTCATTGCATTTACGTTATTATGTGCTGTTTTCAGTCAATCGTT
GCTTTTTGAGTGCATTTTTAGGCATTCTCTAAAGATACAAAAATCTAAGC
TTTAGCCCCCAAATATCAAAATGCTTCCTACACTGTCTGCACCCAAAAAC
GTCGATGAATTTTGTTTTCTTTCTGACGCCTCAAATAATCGTTGAAAATA
AAAAAATGAGCCAAATGCCACTGATTTGTCACCTAAAGAATCTATCCTAG
TGCATAGTTCCATTTGAATCCATTTTGGATGAAAATCATTCAAGCTGAAA
GTTTAATTTTTTAAAGTTACTGCACCCCAAAATGTAGGTGAGCCTTTTTC
CCTATAGCTTCAGGTGGAACCAACAAATCTTGTCGATTTTTTGTATGATA
AGACCTAATAGAATACAGAATCGACAAAAATTTTAGAATAAGAGAGATGA
TCCAGAAAGTTGTCAAAAAAACTTGAATTGTTTTCTACTTCATCCCAAAA
TGAGGGTGTATTCTTTTGTGTGTTTTCAGAGAAAAGCAGAAAATTACGGG
ACTATTAATTCACAATCATTTGGTCATCTAAACCAAAGCATAATTGACCC
CCCAAGCTCCCGGACTGCTAAAATACTTATAAATTATTTTACGAGCGTCA
GATTTTCCCTGTATACTACAACGTTATGATCTTTTTCAGATGACGTCATT
CAACAGTCCTTCACAACATTCTCCAAAGATGAATGAGGTTGGAAAAGATT
CTTTATATCTCATTATTTTTTTATTCCAGGTCGATTCTAATTCACGATTT
TTTTTCACGATAGTCAAGACTTTCATTTTAAATCCGCTTCTACTACTAGC
AGGGGGGAATTTGTTTTTTGGTCGCTGGATTTTTTACTCAAAGCACTTAT
TATACATAAGTGAAAAAAGGAATGGGTAGGGGAATGGTAAGGGGTAGGGG
AATCAAATTCTCTTGGGTGCCAATTTTTTTTCGGACATTTTGGTGTTATG
TTCGGACAAATCTGACGGTCTCTGATGTTTTTTAAGGACCATAATTTGAT
AGACTAGCAAAATTATAGCGGAAATTTAAACAAATTGGGAACAACCTGAG
GCTCCAACCTCAGAAATATGCAAGAAAATGTCGAATTTCATTAAATATTT
GGGACTTGGGGCTAAGAACATACAACCATGGATAGTAGTACTGTTTACCC
AAAAATGAAAAAAAATGAAAGTTGCCGGAAATCGCCTAATTGGATTTTCG
TCGGAAAGTCCATAGCCCAAACCATGCTTGATGATGTTTAGTACTGTGTT
TTCGAAGAAAATTTCGTTAATTATATCTCATTTTATTCCTTTTTGCTAGG
CTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTC
GAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAA
ACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGAAA
ACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGGTANATTTTAGTGT
AAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGGTAAATATAACA
CTATTACGTATTATTATCCATATCGGACATTCAAACAACGTTTTTTTCTA
GCGTCAGCTAAATCTTTTCACTTCAATGCTATGACTTTAATAAGTTTTTA
GCACCTTGCGAGTGGGCCGCAAATGACCAAAACGTGTTTTTTTCTGACGT
TAGTTTAGTCTCTTCGCTTCAATGCAACAACTTCAATCCAATTCCGAGCG
GGCCGCAAATGACGTTATTGCCCTATAACCCAGGCGGTTAATGATATTTC
AGCCCTCTGAAGCCTGGTGCTTTAGTTTCCTCAGCGCGGGTATGACAATT
TGAGTCACAAAACCTTTCAATAGCGCCCGCCGATTGAATCTTTAATGGCT
TACTTAATGACCGCTGTATGGATAATAATTGATGTTTGATGTGTTTCAGA
CATTGAGTTTAAAGCTCCAAAATGGCTAGAGAGGAATCTTCACCTTTCCT
AACCAAAAAGAAAGTGAAGCCTTAATTTTGCATAACATTTAGAAATCTTG
TTTGCAAAACACACGGGTCACGTGTTCTGGATAGGAAATTTCCAATCCAG
GAGTTTCGGATCTAGCACCTTCCGGTGCTTTAAAATCAATGGGTTCAGAC
GTGCGCGAAAAATGTCCTTCTTGTAAGTGAAGAACACTAAAAACTATTTG
AATTGTGATTTTGTGCTACCTGGTAATTTAGTTTTTCTGTACAACTCTGT
GTGCATTTTTCCTGTTTGACACAAAAGTTCACGTTGACAAGGTCCGTGAC
TTTGCTTAGCTTATTTTGAAAAATTCTAAAACATATTTTAATACGACTAG
TACTGCTTAACGAATCTTGGGTTTTTCTCCAATTTTTACTTCTGTGTAGG
AATTCCAAAAACGACGATTGTTGTTGTTTTTTTCAGAGATGATCTATTTG
ACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGATTC
ATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATGGCTG
CAATCAATGTTCAAAAACCTGGTCAGTTTTATTTTACTTTTGTTGTGCTA
CACGGCTTTAACATAAACCAGCAAATTTTGGCTTGGATAGCTTTTAACCA
TCCGAGCAACCAAAATGATGTGCACTTTTTTATAAGAACACACTATATAA
GAACATAATAGGCCTCGATGGCTGAATTATCAAGAACAAATTCAGAGCAC
CCTAAAACATCCAATTTCTTTGGAAAATGGGTCAAAAATACTCTTAAAAT
GGTGAAAATAAAAACATTTTAAGAACATTTTAGGCTTTAAACTCAAAAAA
TTAAGAACATCCAAAGGCTTCAAAATTGTGGATATTCTTATGAAAAAACG
TGTATATTTATGTTTTGTTCTTGTTAATACAGATAATGGATTTTATATAA
ACGATGGACTCTTCATAAAATCTAATGGCACTGGATACGTTCTCAAGCCG
TCACAGATGACAACAAAAGGTANATTCTTATAAAAAAACGTGTATATTTA
TGTTTTGTTCTTGTTAATACAGATAATGGATTTTATATAAACGATGGACT
CTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGATGA
CAACAAAAGGTACTTTTTTTTAAATTGGCGAGACCAATTTAATTTGTTGT
TTTACGGGCCAAGCTACCCAAAAAAGAGGGTCGGTCGGTCTGTCGGCGAA
AAAATATAATAAAAGTAGAATTTCTCCTATAAAATCTCCTAAAAAGTCAG
CAAAAACTAGTACATCTTGACAAAAATGTCAAATAGAGAATAAAAAGACA
CCAAAATTTTGAAAATTTGGCAGTCTGTAAAGCAAACGTTTTACCAAAAT
CAATTTAATTTTATCTCGATTTTTGAGATTTCAGGGTTGGTCGGGCCCGT
AAATCAAATCGGTCTCGCCTAAGCATCCAAAAACTGGCTCGGAGATGATT
AGATCAATACTGAAAAATGCTTGAACGATATATCCTTGAGCAAAATTTTA
AGCAAGACTCTGTAGCCTCAAAAAATGTAGCTTCAAGGTAATGCTTAGAG
TAGAGTCCAGTGAAGCAGACAAGAGGATATCGCTATCTTGAATTTTTTCA
CTTTCGTTTTCAAAAATCATAAAAAAACAACCAAACAAGAAGTACCTCCA
AAATTTGAAAAAAGTTGGTTCATTAGTCATGGTTTTATGTTTGTTTTTCT
CTAAAAAGGGTGTGGATCTAGTGGCATGTATTTGATACCACCTCAAGCAA
AGCCAAAAAATGCAGTTTACCAACTTACACCGGGCCACTTATCAGCGCCA
CCCAGTCTATCAAAAAGCTATAAGTCTATTAAGCCCCCGGGCTAGGTAAT
CCTTAGTATACTCTTAAGTTTTTGCCATATAATATGATATATGCTTATAA
GTTCAATTCTTATTAAAAAAAAATTATTTTTATAAGTATGCTGATGAGGA
GGACAAATTAAAACTTTATTGAAACTCTATTTTCTTTACAGGATCTACAT
ATCACCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATG
AAAATCGAGGTTTGTAAGTTATATATCGAAAGTGTATCTGAAATCACTTT
ATTACTAGCCATCACAAAAAGTCTCAACTGAGTGAGAAATGGAATGGAAA
ATCTTATTGTTTGATTTCATCAGCAAGAAAATTTCAACATTTCTATGATT
TGTGAATATTTATTTTCCATTTATTCTTCGTATTTTTACAGATCTTTTGT
GGTCAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGA
GATGGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTG
AGGTATAAATGAGGCTCATTGTAACCGCACTAAACACTTTTTAATTTAGC
GAGGAACTTGCTTTGACGAGACAATAATTTTTTTTCCTTCTGATAAGAAC
TAATTTGTAAAAAAGTTGTTTTTTTTTCCAAAAANGCATTCTTCTTATGA
GTTTCTCCGGGAATCAAAAAAATATTTGTAAAATAAGGTAAGCATCACTC
GTTACGTAATTCATGGACTGCGCCTGCTAAACATTATTTACTTTTATCTA
TTTTTTCAAGCCGTCAAATAACCTGTTCAATCCTGTTTGGGAACGAAGCA
CTTTCACTTTCGATTTATCGTTACCCTCAATGGTATGTACTTTTAAGGGG
NGGAACTTGCTTTGACGAGACAGTAAATTTTTTTATTATTCTGATAAGAA
CTAATTTGTAAAAAAGTTGGTTCTTTTTCCAAAAAGTGAGTAATTCAGAC
AACAGACAAAACTAAGGTTTTTAGGAACTTACTTTGGCGTGACGAAATTT
GTCAAAATTTGCTAAATTGGCCAAAAGAAATTCCCTTGAGATATTTACTA
AAAGACACCAGTAGCTGTTGCTGAGGAGCTATCACAAGTGGTCTAAGGCG
TTTATGTGTATGAAATTTATCGTAGATTAGTTTCTCTATTATTGTAAATT
TTGGCCAAAACTCATAGAAAAATGAAAAAAAGAGACTCGTTCGCAAACTT
TACTCAACGCAAAAATTTTAGATTCTCGCTTTGCGNTATGTGATTTTTGA
CTTTCAAATTACCTTTGAATGGATAACCAGAGATAAAAATTCCATCTTAC
CATGGTTGTGACTTCAGCGCTTACTTTGTCGTTACGGTGATATATTTTAC
TTTCAACTATGTGTAGCCAAGCGTCGTGCGCTTTTGATATGAGATAAGTG
GTTTCGTTTCCCCAATGGAAAAGATTCAACTCAGGTTTTAAACTAAATGT
TTCCCTCAAAGTTTTTCTTAGAATGTGCTTTGAGTATTAAGTTCATTAGG
GAGTGGTCAGAAAGTATCTACTAGGGGGATGGAGGATTCTAGGGGTATGA
AAAGTTTTTCCCACCCTTAGGGGAGGGTCTGAAAAATATTCATGTCTTTA
GGGGGGTTCTTTATTAGAAAGGATAGGGGCGAAAAATATCTTGACTGGTT
AGAGGGTTTGAATTTATTTTGAGGATATCAAGGGGGGGGTGCAAATTATT
TTTGGAATTTTTGAAAATATCCTCCATCCCACCCTACTATAATCAGCGCC
GAAATATTTGGCACAAAAGGGGAATTCAAAAATGTTCCAATAATAAGGCT
GACAATATAGCCTGGAAGCCACTTAACCCCTCCCAAATCGAAAAATCCAA
TGAAGCAAAGTGGAAGTACTGAAATTGCAATTCTCGCCCGACCTTTAAAT
TCTGAAAAACGTTAAAATACCTAAAATTGCCAATATATCTCGGCGCTGAT
TATAGATACCTTCTGACTACTCCCTTAGGAAAAGTTTTTGATGAAATTAC
ATTATGACTGTCTTACATTTCAGTGCTTGTTGCTGGTAAAGGTTGTGAGT
GTGTCACGTGTCAACCGATTAGTTTAAAGACAGGTAATTTGTTTTGATAG
AATTTCCCGGGTACTAAAATCTCGGATTGAGGTCATCCCTGAGTATTTCC
ATGGTCTTTGTGTCTTTTAACTACCTATGGCTATTTGTTGGTGAAATATC
CTTACTAATTGTCATCGTTATCAATAAACATTTTAAACTTGTCCTTGGAA
CGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034408XLOC_034408Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054600-exon-scaffold_243-1575043694:198501..198603TCONS_00054600-exon-scaffold_243-1575043694:198501..198603Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:192662..192712TCONS_00054600-exon-scaffold_243-1575043694:192662..192712Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:191617..191664TCONS_00054600-exon-scaffold_243-1575043694:191617..191664Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:190818..191004TCONS_00054600-exon-scaffold_243-1575043694:190818..191004Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:189733..189867TCONS_00054600-exon-scaffold_243-1575043694:189733..189867Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:189285..189371TCONS_00054600-exon-scaffold_243-1575043694:189285..189371Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:188195..188262TCONS_00054600-exon-scaffold_243-1575043694:188195..188262Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:187902..188012TCONS_00054600-exon-scaffold_243-1575043694:187902..188012Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:187572..187643TCONS_00054600-exon-scaffold_243-1575043694:187572..187643Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1575043694:186148..186380TCONS_00054600-exon-scaffold_243-1575043694:186148..186380Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:198501..198603TCONS_00054600-exon-scaffold_243-1510915933:198501..198603Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:192662..192712TCONS_00054600-exon-scaffold_243-1510915933:192662..192712Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:191617..191664TCONS_00054600-exon-scaffold_243-1510915933:191617..191664Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:190818..191004TCONS_00054600-exon-scaffold_243-1510915933:190818..191004Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:189733..189867TCONS_00054600-exon-scaffold_243-1510915933:189733..189867Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:189285..189371TCONS_00054600-exon-scaffold_243-1510915933:189285..189371Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:188195..188262TCONS_00054600-exon-scaffold_243-1510915933:188195..188262Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:187902..188012TCONS_00054600-exon-scaffold_243-1510915933:187902..188012Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:187572..187643TCONS_00054600-exon-scaffold_243-1510915933:187572..187643Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1510915933:186148..186380TCONS_00054600-exon-scaffold_243-1510915933:186148..186380Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:198501..198603TCONS_00054600-exon-scaffold_243-1491911889:198501..198603Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:192662..192712TCONS_00054600-exon-scaffold_243-1491911889:192662..192712Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:191617..191664TCONS_00054600-exon-scaffold_243-1491911889:191617..191664Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:190818..191004TCONS_00054600-exon-scaffold_243-1491911889:190818..191004Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:189733..189867TCONS_00054600-exon-scaffold_243-1491911889:189733..189867Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:189285..189371TCONS_00054600-exon-scaffold_243-1491911889:189285..189371Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:188195..188262TCONS_00054600-exon-scaffold_243-1491911889:188195..188262Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:187902..188012TCONS_00054600-exon-scaffold_243-1491911889:187902..188012Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:187572..187643TCONS_00054600-exon-scaffold_243-1491911889:187572..187643Clytia hemisphaericaexon
TCONS_00054600-exon-scaffold_243-1491911889:186148..186380TCONS_00054600-exon-scaffold_243-1491911889:186148..186380Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:186148..198603 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	2.86694	0.760266	4.40522	3.63183	3.02006	4.71246	3.28181	2.28277	1.8734	2.23448	0	0.674255	0	0.150432	0.819527	0.784708	0	0	0	0	8.19796	7.41417	0	1.51516	0	1.46625
Blast
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BLAST of TCONS_00054600 vs. Swiss-Prot (Human)
Match: PLCB3 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Homo sapiens GN=PLCB3 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.054e-24
Identity = 69/233 (29.61%), Postives = 112/233 (48.07%), Query Frame = 2 
Query:  179 QHSPKMNEASNEEKTGDSEQVQIPFEASMARLIVYCISVPYKHGET---NPNCCEMHYFSENQISTLVEKCPLEMIYLTQRKFIRTYPKASRVDSSNYNPMLSWRHGIQMAAINVQKPDNGFYINDGLFIKSNGTGYVLKPSQMTTKGSTYHPQMTKPATGDFSQRMKIEIFCGQFVESEHFTDLPVAIEMEIIGAVEKDCQSFYTEPSN-NLFNPVWERSTFTF-DLSLPSM 862
            Q  PK  + + +E T  SE   +     M+ L+ Y   V +K  E       C EM  F E +    + K P+E +   +++  R YPK +RVDSSNY P L W  G Q+ A+N Q  D    +N G+F  +  +GY+LKP  M     ++ P       G  +  +++++  GQF+       + + +E+++ G      + + T  S  N FNPVW+   F F  + LP++
Sbjct:  567 QTDPK--KPTTDEGTASSE---VNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL 791
The following BLAST results are available for this feature:
BLAST of TCONS_00054600 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLCB34.054e-2429.611-phosphatidylinositol 4,5-bisphosphate phosphodie... [more]
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