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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058221 ID=TCONS_00058221|Name=TCONS_00058221|organism=Clytia hemisphaerica|type=transcript|length=4125bp
agaaaattttccaaatcccccatttcgattaatgcaatgaaaaatgaaac
ttttctatgtttcacttttttgcacctattcttcaaaatgaaaatattta
agagtTTAAGTTCTTCTATTaaaaattcaatgattttttacggcactttg
ttgacaatctaactctcacatcaaattcccgctttcttcagtaaattgaa
gatgagaaaaaacctaagccacggatcatggattgaaacaaatatatgaa
gggtagGATTTTACAGCTGCCCgttgtgcaaggcactgaaaggccacatg
tgccaaaaagaagggccgtttgaaatgcaGCAACCTTGcattggtggaaa
tttaataaacagctgcgaagcagctgggaagcaatcagtagaagagacca
ctttcgtttctgttgcagatttctaataaaaacttctctcagggactact
tgtcaatgtacatgtacacatgtgttgtgtcaacttgtcagcattgtatt
gttgtaaaggaaaagataaaacaggtaagactagcctagtttctaatcgt
gatataggagtttaagtttagactgacaGGTATGCACTGAAACTAATTTA
GAGACTCAGTCCTGCTAAATTGAGATGTCCATTTTGGGTGTGATAACACT
TTTTGAAGCgaacacaaaacaaaaataagaaaatcccgGAAACTTTTTGG
TAGAAACCAAAAAACTGGGGAAACCTTATCtgcaaaaatagaaaatgtGT
GAGAAATCAAATTGATCATATACTTAAATCAGACTTTACTAGTGGAATTT
CTCAAATTGCTAAAAGTttctgaaaatcttattttgttaCCATATCTTAC
CAGTAAACCATACCAATCAACAAGACCAAAAGTTGGATTCAAAGAATCAT
TAAAAGGAAAACAGGGAAAATATTGGAGACCAGATTTGACTTTTTCTGAT
CATTCCCTAAAAGAATGTCTTAgaattcacagaaaatcaaccTTCTAATA
GAcatgatgaatgaaaatttgttAACTTTCAAATTTACTACCCACAGAAT
GAACAATGTTTAAGTGGACTGAAACCATATGATGCCTTTTAACAGGCGTA
CACATTTTACCCTCATTTTACCCTGAAGGAAATCGTTTGACCCCATAGGG
GTTGGAcgaaatgatgattttgataTTAGCTAGCATGTGGAATGTTAATA
CCTAATTATGTAATATGATTTGATATGAATTAAGAATTAAATGTCCGAAA
TCATACTTTTATGAAATGGCTGTTATAAACATTACAAATAAAGTGTCCTG
TTATGAGATTTGCAACTTATTAAAAGGGGAGCTCAGCTCACAACTGTTAC
TCTAcggaaaataaaaagtttacaaaCTGCTGTACAGTGTTCTGTAGTGt
caaagaattctttttttacaagatttaatttatttcatctGAAACATATG
TTTGGCCCCTCTTTAAAATATGAATTGTTTTCGACAAGGGGATCATTTTG
AAGGAGTTATGTTTTAGGGCTGGTGTGATATTTGTGTTTTGCTTTCTTCA
AAGAGAATTATTTATTAGAATAGACAATTTACTAtgttttggtttctttt
ttaGTTGAAAAGTTCATGTTTACAGATAACAATTGTCTTTTCTTGAAaga
ttagaaaaattttcctacTAGCCCATATTCTTCGTAGGGACAAGAAATTC
AAGAGTCATGTTGTGAAATTTCCTGTATGTTCATGAtaatgcaccactgg
agagtcttctgagaacttttaaaatttcccacccaatacgtcacttatag
aaaaaatgacgtattgctattgggtggaacaaaaacagaaaagttgcata
atttcgtgaagtcattttagtggtgcatatcatgaattgagtTTCCTGTT
CTTTTTATAATCAAATGGAAATCTTACATCAAAAGTAAGTTACTACTTAC
TACCTTAATAAATTTGATTCCAATTACAAGATAATGATATGTAATCAGCT
TATATCTCTTATTTAAcgttttagataaaaaatccaTTATTACAGAGAAC
TTTAAGTCAGACATCTCTGCACTTTTTAGTAGCAGAAAAGGTATGTCTCG
GCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTTAACTGTTG
CTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGGGAGAAAAT
GCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGATACAGACAC
AATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGATTGGGACC
GTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCACCTATTGTT
GTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACACCACCAAA
GCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTTAGTTCGCC
ATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAATCTTAACT
CAACTTGGAagagaGCAAGCGTCAGTCACAGGGGATCGTTTAAAAGCATT
AAACATCAAGTTTTCACGAATGACTGTATCTACAATGGTGCGAGCACGTG
AAACAGGAAGCATTATCAGTGAGAAGATACCCGACATTCCTCAAGAACAT
TGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGAACCAACCAGTAA
AGCCTGGACACCAGATCGATCGCAGACTTTCTTTCAAGACAATCCACGAA
TCGAAGGTGCTTTCCGAAAGTACATCCATCGTGCATCACCATCGCAAACA
GAGGATAGCTATGACTTGCTTGTTTGTCATGGCAACGTCATCCGATATTT
TGTTTGCAGGGCACTGCAATTTCCGCCAGAGGGTTGGCTTCGAATGAGCA
CAGGAAACTGTGGTTTGACCTGGCTGACGATTCGACCCAACGGGAACGTT
TCTTTACGGAGCTTCGGGGATACGGGACACTTGCCCCCAGAAATGGTCAC
ATTTACTTAGATATAATTGTATGGTAGATATTGGAGAACTAGAGAATTTT
TAACTGAGAACAGAGGTGACGGACAGTGTTTGCATTCTCGATTCGTATTG
CACTACGCTAATTTGCAATGCGACACGCCTTTTccaccgtagccaccaat
tgccgcgcgggcattttttcgttcgttttatcccactaaaaccgtcccag
tccttttttcgcactagacaatagaaaatacgtcaaaaatggATTGGGAC
gagcgactacggtcgaaaaggtgtattggcaTTGGAATGTTTCGAATGGA
CGGAGAATCTAATTGAAACCCGAATATGATTTGACGTTTGAATTGAGATG
TGATGGGATTGACAGTGCGAATCAAGAGAAGAGAGATGCTGTACCTGTTA
AACAGCTTTGAACAAATCGGCAttttatgaaattaattttttaaatctcg
GCCAGAATTTCAGAACGTCTCTGGAAAAGTCGTAAAAGAAATAGACTATT
GAGCTacagaaaaatggaaaaaaatatggGCAGATTGGATGGTGATGGTT
CTTAAAACCTGAATGAATGAACTTAATGTGGCGAGAACTTGGATATGCTG
AGTGTTGAtgaaattcttgatatgcgtaagtcaatatgacgtcatatttt
tttaacggaagcactcgaaaaaagccggattttgacTTCCGTGTtcctat
ttttagtaacagagaggggtCTAATCCCggattttttcgggtgtttccgc
tagaaaaatgacttacgcatatcaagaataattagattttaaattttttt
aaagatttactTTCAATGTAAATATCATTtggtggacattcttataaaaa
aatctaaagaaaatttgggtggatattggtttatcattattgttattatt
attttttagatatGATTTTCTTATAGTAAAATTGAAAACGAATTGTCAAg
tttaattttgctttttttagtggagtactctcgggtacctaatagccgcc
ccccccctaattaatttttgggaaaatgtttttggaaagttccctctttt
gtcctaattcagctgtattagcctccttttcaaaaattttccacccagga
catttttattccaacccccccccNN Run BLAST on NCBI protein sequence of TCONS_00058221-protein >TCONS_00058221-protein ID=TCONS_00058221-protein|Name=TCONS_00058221-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
MSRLRTTVSKLLTLGGLTVASGSTLAYYRYSLLGENAECRPHAPNVEFKD
TDTIVSEQKSQKPWDDDWDRRKQIRSKKLKEDPPIVVLDKDGDLNTIPAT
PPKPVERKPTATRHVILVRHGQYEMDHTDKEKKILTQLGREQASVTGDRL
KALNIKFSRMTVSTMVRARETGSIISEKIPDIPQEHCSLLREGAPYPPEP
TSKAWTPDRSQTFFQDNPRIEGAFRKYIHRASPSQTEDSYDLLVCHGNVI
RYFVCRALQFPPEGWLRMSTGNCGLTWLTIRPNGNVSLRSFGDTGHLPPE
MVTFT Run BLAST on NCBI transcript from alignment at scaffold_309:192033..198439+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058221 ID=TCONS_00058221|Name=TCONS_00058221|organism=Clytia hemisphaerica|type=transcript|length=6407bp|location=Sequence derived from alignment at scaffold_309:192033..198439+ (Clytia hemisphaerica)
agaaaattttccaaatcccccatttcgattaatgcaatgaaaaatgaaac
ttttctatgtttcacttttttgcacctattcttcaaaatgaaaatattta
agagtTTAAGTTCTTCTATTaaaaattcaatgattttttacggcactttg
ttgacaatctaactctcacatcaaattcccgctttcttcagtaaattgaa
gatgagaaaaaacctaagccacggatcatggattgaaacaaatatatgaa
gggtagGATTTTACAGCTGCCCgttgtgcaaggcactgaaaggccacatg
tgccaaaaagaagggccgtttgaaatgcaGCAACCTTGcattggtggaaa
tttaataaacagctgcgaagcagctgggaagcaatcagtagaagagacca
ctttcgtttctgttgcagatttctaataaaaacttctctcagggactact
tgtcaatgtacatgtacacatgtgttgtgtcaacttgtcagcattgtatt
gttgtaaaggaaaagataaaacaggtaagactagcctagtttctaatcgt
gatataggagtttaagtttagactgacaGGTATGCACTGAAACTAATTTA
GAGACTCAGTCCTGCTAAATTGAGATGTCCATTTTGGGTGTGATAACACT
TTTTGAAGCgaacacaaaacaaaaataagaaaatcccgGAAACTTTTTGG
TAGAAACCAAAAAACTGGGGAAACCTTATCtgcaaaaatagaaaatgtGT
GAGAAATCAAATTGATCATATACTTAAATCAGACTTTACTAGTGGAATTT
CTCAAATTGCTAAAAGTttctgaaaatcttattttgttaCCATATCTTAC
CAGTAAACCATACCAATCAACAAGACCAAAAGTTGGATTCAAAGAATCAT
TAAAAGGAAAACAGGGAAAATATTGGAGACCAGATTTGACTTTTTCTGAT
CATTCCCTAAAAGAATGTCTTAgaattcacagaaaatcaaccTTCTAATA
GAcatgatgaatgaaaatttgttAACTTTCAAATTTACTACCCACAGAAT
GAACAATGTTTAAGTGGACTGAAACCATATGATGCCTTTTAACAGGCGTA
CACATTTTACCCTCATTTTACCCTGAAGGAAATCGTTTGACCCCATAGGG
GTTGGAcgaaatgatgattttgataTTAGCTAGCATGTGGAATGTTAATA
CCTAATTATGTAATATGATTTGATATGAATTAAGAATTAAATGTCCGAAA
TCATACTTTTATGAAATGGCTGTTATAAACATTACAAATAAAGTGTCCTG
TTATGAGATTTGCAACTTATTAAAAGGGGAGCTCAGCTCACAACTGTTAC
TCTAcggaaaataaaaagtttacaaaCTGCTGTACAGTGTTCTGTAGTGt
caaagaattctttttttacaagatttaatttatttcatctGAAACATATG
TTTGGCCCCTCTTTAAAATATGAATTGTTTTCGACAAGGGGATCATTTTG
AAGGAGTTATGTTTTAGGGCTGGTGTGATATTTGTGTTTTGCTTTCTTCA
AAGAGAATTATTTATTAGAATAGACAATTTACTAtgttttggtttctttt
ttaGTTGAAAAGTTCATGTTTACAGATAACAATTGTCTTTTCTTGAAaga
ttagaaaaattttcctacTAGCCCATATTCTTCGTAGGGACAAGAAATTC
AAGAGTCATGTTGTGAAATTTCCTGTATGTTCATGAtaatgcaccactgg
agagtcttctgagaacttttaaaatttcccacccaatacgtcacttatag
aaaaaatgacgtattgctattgggtggaacaaaaacagaaaagttgcata
atttcgtgaagtcattttagtggtgcatatcatgaattgagtTTCCTGTT
CTTTTTATAATCAAATGGAAATCTTACATCAAAAGTAAGTTACTACTTAC
TACCTTAATAAATTTGATTCCAATTACAAGATAATGATATGTAATCAGCT
TATATCTCTTATTTAAcgttttagataaaaaatccaTTATTACAGAGAAC
TTTAAGTCAGACATCTCTGCACTTTTTAGTAGCAGAAAAGGTATGTCTCG
GCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTTAACTGTTG
CTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGGGAGAAAAT
GCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGATACAGACAC
AATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGATTGGGACC
GTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCACCTATTGTT
GTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACACCACCAAA
GCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTTAGTTCGCC
ATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAATCTTAACT
CAACTTGGAaggtttgtttatttgatttttgtaaTTTAGTTATTTCCGTA
GGCCTCGTTAGGGTATGTTAAAATCATCTGAAAGTATATTCGGGATGTAA
GTTTTTACCAGTGCTGGAAATAAGGAAATTTCATGAATTCATCTTAAGAt
aatactgaggttaagcataccaggataatcacgacgacggacgaaaagtg
taataggctagtgaaaatacgaaatttgattggttgaaactcactagcct
gttaaattttcgttcgtcgtcgtgattataccgatttacttaacctcgct
aatattCAAAGTAGATCAAAAATTGGTAGATTAATATTTACGAAAGAAAC
CTATAAGACATTTAACCGGAGAAAGTGGAAAAGTAAGCTTCAGAATGACC
GGTAGAAACTACGAAGTGACCGGGTAATTACTCGccaccggccgttattt
gcagcactgcttTACAACTGTCCCCGACAGACCGGCTGATTGGGATTTCT
ACTAATTTAGACTTGTAACCATAACCTCCTTAAAAATAAGattcataaat
tattttattttcagagaGCAAGCGTCAGTCACAGGGGATCGTTTAAAAGC
ATTAAACATCAAGTTTTCACGAATGACTGTATCTACAATGGTGCGAGCAC
GTGAAACAGGAAGCATTATCAGTGAGAAGATACCCGACATTCCTCAAGAA
CATTGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGAACCAACCAG
TAAAGCCTGGACACCAGATCGATCGGTATGTTTCATTGTTAAACACACAT
AGTTgtccttttctttttatagtgttctttcaagttaaatttttacatta
gcAGTCACACAAGTGTCTGTATTTAACCGAAAGAAATCAATAATGCAGTT
AAATGTTCGTAGATATTCAGATAATTTAAAACTGTTGGTGTTGTTATTTT
ATGACTAAATTAAAGGAcccttttggacctacctggaggtcctataaatt
aacccatgtccgttcgttcgttcgtccgtctgttaccagcttttctcgag
attggctcgttagttttctctgatttttggcacaaaggcgCAAAATAGTA
ATTTTCCGGTattaaatcatcaaaaacaggtGTGTGGAGTGGTCTTTCGA
AAAGCATTGAGAGCAGTTGACAGTTGATTGAGAAACGGAACGTTGCCTAA
CCGTGACAACCGTAGATGTACAGGATAGGACCTTGACGGACTGATTTTCT
TCTCGAAAAAATAACCTTAATCTACTGTTTTTCAGCAGACTTTCTTTCAA
GACAATCCACGAATCGAAGGTGCTTTCCGAAAGTACATCCATCGTGCATC
ACCATCGCAAACAGAGGATAGCTATGACTTGCTTGTTTGTCATGGCAACG
TCATCCGATATTTTGTTTGCAGGTAACGTCGATTTATAAACCagtttttc
aagttttgttttCACAGTAAAAAGGTAGAGTGCCCCTGAAAAACGTATTT
ATGGATTGGATGGGCCTGGTCAATTATTAGAGTTTTCATGTTGCTTAAAG
TCTTTTCATTTTCCTGGAACACCAAGTTTGATGATGCCCTTTCTCAGAAA
ATATAATCATCTGTAAAAATTAATTCAATTTGCTCTGCAATCTGTTCTAA
ACTTAAACTCTTTTATTTTATCATACTATTATGGTAGCTGTCTCGAGGAG
CATTGTGTGCGTTCAAAAACACTTAACCGGCGTTTGCAACGACAGGAACC
GTCTAGTTTGCTCTAAACCAGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCATTTTAGGATTTAACTACCATGGGTAGTAAAggtttttttcgaatt
ttcgtcacaccaccaccatagtaaacgtcattatgtctgagattttacta
ccgacccccccctgtcTAAACTGAAActcattcatttttggaaaaaaatc
gcgaGAATGATCTTTCAATTTCATACTTTTATACATTTCAGGGCACTGCA
ATTTCCGCCAGAGGGTTGGCTTCGAATGAGCACAGGAAACTGTGGTTTGA
CCTGGCTGACGATTCGACCCAACGGGAACGTTTCTTTACGGAGCTTCGGG
GATACGGGACACTTGCCCCCAGAAATGGTCACATTTACTTAGATATAATT
GTATGGTAGATATTGGAGAACTAGAGAATTTTTAACTGAGAACAGAGGTG
ACGGACAGTGTTTGCATTCTCGATTCGTATTGCACTACGCTAATTTGCAA
TGCGACACGCCTTTTccaccgtagccaccaattgccgcgcgggcattttt
tcgttcgttttatcccactaaaaccgtcccagtccttttttcgcactaga
caatagaaaatacgtcaaaaatggATTGGGACgagcgactacggtcgaaa
aggtgtattggcaTTGGAATGTTTCGAATGGACGGAGAATCTAATTGAAA
CCCGAATATGATTTGACGTTTGAATTGAGATGTGATGGGATTGACAGTGC
GAATCAAGAGAAGAGAGATGCTGTACCTGTTAAACAGCTTTGAACAAATC
GGCAttttatgaaattaattttttaaatctcgGCCAGAATTTCAGAACGT
CTCTGGAAAAGTCGTAAAAGAAATAGACTATTGAGCTacagaaaaatgga
aaaaaatatggGCAGATTGGATGGTGATGGTTCTTAAAACCTGAATGAAT
GAACTTAATGTGGCGAGAACTTGGATATGCTGAGTGTTGAtgaaattctt
gatatgcgtaagtcaatatgacgtcatatttttttaacggaagcactcga
aaaaagccggattttgacTTCCGTGTtcctatttttagtaacagagaggg
gtCTAATCCCggattttttcgggtgtttccgctagaaaaatgacttacgc
atatcaagaataattagattttaaatttttttaaagatttactTTCAATG
TAAATATCATTtggtggacattcttataaaaaaatctaaagaaaatttgg
gtggatattggtttatcattattgttattattattttttagatatGATTT
TCTTATAGTAAAATTGAAAACGAATTGTCAAgtttaattttgcttttttt
agtggagtactctcgggtacctaatagccgccccccccctaattaatttt
tgggaaaatgtttttggaaagttccctcttttgtcctaattcagctgtat
tagcctccttttcaaaaattttccacccaggacatttttattccaacccc
cccccNN Coding sequence (CDS) from alignment at scaffold_309:192033..198439+ >TCONS_00058221 ID=TCONS_00058221|Name=TCONS_00058221|organism=Clytia hemisphaerica|type=CDS|length=3672bp|location=Sequence derived from alignment at scaffold_309:192033..198439+ (Clytia hemisphaerica)
ATGTCTCGGCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTGGTTT
AACTGTTGCTTCAGGAAGTACACTTGCATATTATCGATATTCACTTTTGG
GAGAAAATGCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAAAGAT
ACAGACACAATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATGATGA
TTGGGACCGTCGTAAACAAATCCGtagtaagaaacttaaagaaGACCCAC
CTATTGTTGTCCTTGATAAAGACGGTGACTTGAACACTATACCTGCAACA
CCACCAAAGCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCATTTT
AGTTCGCCATGGTCAATATGAAATGGACCACACTGATAAAGAGAAGAAAA
TCTTAACTCAACTTGGAagagaGCAAGCGTCAGTCACAGGGGATCGTTTA
AAAGCATTAAACATCAAGTTTTCACGAATGACTGTATCTACAATGGTGCG
AGCACGTGAAACAGGAAGCATTATCAGTGAGAAGATACCCGACATTCCTC
AAGAACATTGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGAACCA
ACCAGTAAAGCCTGGACACCAGATCGATCGCAGACTTTCTTTCAAGACAA
TCCACGAATCGAAGGTGCTTTCCGAAAGTACATCCATCGTGCATCACCAT
CGCAAACAGAGGATAGCTATGACTTGCTTGTTTGTCATGGCAACGTCATC
CGATATTTTGTTTGCAGGGCACTGCAATTTCCGCCAGAGGGTTGGCTTCG
AATGAGCACAGGAAACTGTGGTTTGACCTGGCTGACGATTCGACCCAACG
GGAACGTTTCTTTACGGAGCTTCGGGGATACGGGACACTTGCCCCCAGAA
ATGGTCACATTTACTTAGATGTCTCGGCTACGAACAACTGTATCCAAGCT
ATTAACCCTTGGTGGTTTAACTGTTGCTTCAGGAAGTACACTTGCATATT
ATCGATATTCACTTTTGGGAGAAAATGCTGAATGCAGGCCACATGCACCA
AATGTAGAATTCAAAGATACAGACACAATCGTTTCTGAACAGAAATCTCA
AAAACCTTGGGATGATGATTGGGACCGTCGTAAACAAATCCGtagtaaga
aacttaaagaaGACCCACCTATTGTTGTCCTTGATAAAGACGGTGACTTG
AACACTATACCTGCAACACCACCAAAGCCTGTGGAACGAAAACCTACCGC
TACTAGACACGTCATTTTAGTTCGCCATGGTCAATATGAAATGGACCACA
CTGATAAAGAGAAGAAAATCTTAACTCAACTTGGAagagaGCAAGCGTCA
GTCACAGGGGATCGTTTAAAAGCATTAAACATCAAGTTTTCACGAATGAC
TGTATCTACAATGGTGCGAGCACGTGAAACAGGAAGCATTATCAGTGAGA
AGATACCCGACATTCCTCAAGAACATTGTTCTCTGTTACGCGAAGGGGCG
CCTTATCCACCAGAACCAACCAGTAAAGCCTGGACACCAGATCGATCGCA
GACTTTCTTTCAAGACAATCCACGAATCGAAGGTGCTTTCCGAAAGTACA
TCCATCGTGCATCACCATCGCAAACAGAGGATAGCTATGACTTGCTTGTT
TGTCATGGCAACGTCATCCGATATTTTGTTTGCAGGGCACTGCAATTTCC
GCCAGAGGGTTGGCTTCGAATGAGCACAGGAAACTGTGGTTTGACCTGGC
TGACGATTCGACCCAACGGGAACGTTTCTTTACGGAGCTTCGGGGATACG
GGACACTTGCCCCCAGAAATGGTCACATTTACTTAGATGTCTCGGCTACG
AACAACTGTATCCAAGCTATTAACCCTTGGTGGTTTAACTGTTGCTTCAG
GAAGTACACTTGCATATTATCGATATTCACTTTTGGGAGAAAATGCTGAA
TGCAGGCCACATGCACCAAATGTAGAATTCAAAGATACAGACACAATCGT
TTCTGAACAGAAATCTCAAAAACCTTGGGATGATGATTGGGACCGTCGTA
AACAAATCCGtagtaagaaacttaaagaaGACCCACCTATTGTTGTCCTT
GATAAAGACGGTGACTTGAACACTATACCTGCAACACCACCAAAGCCTGT
GGAACGAAAACCTACCGCTACTAGACACGTCATTTTAGTTCGCCATGGTC
AATATGAAATGGACCACACTGATAAAGAGAAGAAAATCTTAACTCAACTT
GGAagagaGCAAGCGTCAGTCACAGGGGATCGTTTAAAAGCATTAAACAT
CAAGTTTTCACGAATGACTGTATCTACAATGGTGCGAGCACGTGAAACAG
GAAGCATTATCAGTGAGAAGATACCCGACATTCCTCAAGAACATTGTTCT
CTGTTACGCGAAGGGGCGCCTTATCCACCAGAACCAACCAGTAAAGCCTG
GACACCAGATCGATCGCAGACTTTCTTTCAAGACAATCCACGAATCGAAG
GTGCTTTCCGAAAGTACATCCATCGTGCATCACCATCGCAAACAGAGGAT
AGCTATGACTTGCTTGTTTGTCATGGCAACGTCATCCGATATTTTGTTTG
CAGGGCACTGCAATTTCCGCCAGAGGGTTGGCTTCGAATGAGCACAGGAA
ACTGTGGTTTGACCTGGCTGACGATTCGACCCAACGGGAACGTTTCTTTA
CGGAGCTTCGGGGATACGGGACACTTGCCCCCAGAAATGGTCACATTTAC
TTAGATGTCTCGGCTACGAACAACTGTATCCAAGCTATTAACCCTTGGTG
GTTTAACTGTTGCTTCAGGAAGTACACTTGCATATTATCGATATTCACTT
TTGGGAGAAAATGCTGAATGCAGGCCACATGCACCAAATGTAGAATTCAA
AGATACAGACACAATCGTTTCTGAACAGAAATCTCAAAAACCTTGGGATG
ATGATTGGGACCGTCGTAAACAAATCCGtagtaagaaacttaaagaaGAC
CCACCTATTGTTGTCCTTGATAAAGACGGTGACTTGAACACTATACCTGC
AACACCACCAAAGCCTGTGGAACGAAAACCTACCGCTACTAGACACGTCA
TTTTAGTTCGCCATGGTCAATATGAAATGGACCACACTGATAAAGAGAAG
AAAATCTTAACTCAACTTGGAagagaGCAAGCGTCAGTCACAGGGGATCG
TTTAAAAGCATTAAACATCAAGTTTTCACGAATGACTGTATCTACAATGG
TGCGAGCACGTGAAACAGGAAGCATTATCAGTGAGAAGATACCCGACATT
CCTCAAGAACATTGTTCTCTGTTACGCGAAGGGGCGCCTTATCCACCAGA
ACCAACCAGTAAAGCCTGGACACCAGATCGATCGCAGACTTTCTTTCAAG
ACAATCCACGAATCGAAGGTGCTTTCCGAAAGTACATCCATCGTGCATCA
CCATCGCAAACAGAGGATAGCTATGACTTGCTTGTTTGTCATGGCAACGT
CATCCGATATTTTGTTTGCAGGGCACTGCAATTTCCGCCAGAGGGTTGGC
TTCGAATGAGCACAGGAAACTGTGGTTTGACCTGGCTGACGATTCGACCC
AACGGGAACGTTTCTTTACGGAGCTTCGGGGATACGGGACACTTGCCCCC
AGAAATGGTCACATTTACTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058221-exon-scaffold_309-1491911889:192033..194543 | TCONS_00058221-exon-scaffold_309-1491911889:192033..194543 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1510915933:192033..194543 | TCONS_00058221-exon-scaffold_309-1510915933:192033..194543 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1575043694:192033..194543 | TCONS_00058221-exon-scaffold_309-1575043694:192033..194543 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1491911889:195097..195307 | TCONS_00058221-exon-scaffold_309-1491911889:195097..195307 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1510915933:195097..195307 | TCONS_00058221-exon-scaffold_309-1510915933:195097..195307 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1575043694:195097..195307 | TCONS_00058221-exon-scaffold_309-1575043694:195097..195307 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1491911889:195818..195954 | TCONS_00058221-exon-scaffold_309-1491911889:195818..195954 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1510915933:195818..195954 | TCONS_00058221-exon-scaffold_309-1510915933:195818..195954 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1575043694:195818..195954 | TCONS_00058221-exon-scaffold_309-1575043694:195818..195954 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1491911889:197174..198439 | TCONS_00058221-exon-scaffold_309-1491911889:197174..198439 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1510915933:197174..198439 | TCONS_00058221-exon-scaffold_309-1510915933:197174..198439 | Clytia hemisphaerica | exon |
| TCONS_00058221-exon-scaffold_309-1575043694:197174..198439 | TCONS_00058221-exon-scaffold_309-1575043694:197174..198439 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:192033..198439 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013078 | His_Pase_superF_clade-1 |
| IPR029033 | His_PPase_superfam |
Blast
BLAST of TCONS_00058221 vs. Swiss-Prot (Human)
Match: PGAM5 (Serine/threonine-protein phosphatase PGAM5, mitochondrial OS=Homo sapiens GN=PGAM5 PE=1 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 6.901e-67 Identity = 125/299 (41.81%), Postives = 173/299 (57.86%), Query Frame = 2
Query: 2120 KLLTLGGLTVASGSTLAYYRYSLLGE-----NAECRPHAPNVEFKDTDTIVSEQKSQKPWDDDWDRRKQIRSKKLKEDPPIVVLDKDGDLNTIPATPPKPVERKPTATRHVILVRHGQYEMDHTDKEKKILTQLGREQASVTGDRLKALNIKFSRMTVSTMVRARETGSIISEKIPDIPQEHCSLLREGAPYPPEPTSKAWTPDRSQTFFQDNPRIEGAFRKYIHRASPSQTEDSYDLLVCHGNVIRYFVCRALQFPPEGWLRMSTGNCGLTWLTIRPNGNVSLRSFGDTGHLPPEMVT 3001
+ L L +A GS + +G+ +AE RP P + WD +WDRR+ + +++ V + +L + K K ATRH+ L+RH QY +D + ++ + LT LGREQA +TG RL +L +KF+++ S+M RA ET IIS +P + + LLREGAP P+P W P+ Q +++D RIE AFR YIHRA Q EDSY++ +CH NVIRY VCRALQFPPEGWLR+S N +T L IRPNG V+LR+ GDTG +PP+ +T
Sbjct: 5 QALQLAACGLAGGSAAVLFSAVAVGKPRAGGDAEPRPAEPPAWAGGA------RPGPGVWDPNWDRREPLSLINVRKRN---VESGEEELAS------KLDHYKAKATRHIFLIRHSQYHVDGSLEKDRTLTPLGREQAELTGLRLASLGLKFNKIVHSSMTRAIETTDIISRHLPGVCKVSTDLLREGAPIEPDPPVSHWKPEAVQ-YYEDGARIEAAFRNYIHRADARQEEDSYEIFICHANVIRYIVCRALQFPPEGWLRLSLNNGSITHLVIRPNGRVALRTLGDTGFMPPDKIT 287
The following BLAST results are available for this feature:
|
