TCONS_00054774 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054774
Unique NameTCONS_00054774
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2488

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054774 ID=TCONS_00054774|Name=TCONS_00054774|organism=Clytia hemisphaerica|type=transcript|length=2488bp
GATAAACGAAAAAGTGTTCTTGGGCCACAATGGGTCAAACACTACTGTTC
ATAtaccaaagaaaacaaaattctcACAATGGTACCTTACACGCAAACAA
ATACAAAACTTAATGCAAACACTGATACAATCATCGTTACATCATGTACC
CGGAGGCCAACAGAATCTTCAGAACGAAGATTTTTATTTGACATCACTGG
ACAAGATCGCAGTCAACCATTAACTATGCAATGTTTGTCTGAAGATGATC
GCAAACTATGGTTGGAAGTTATGGAAGGAAAAGAACCGATTTACATGGAA
TCAAATGAACTCAAACAAAATGATGGTGTTACAAACTTGGATCAAACAGG
TCTTCAATTCATCTTGAAATGTATGGAAGGCATTGAACGCCGagGTTTAA
CAGACCAAGGAATTTACAGGATAGCTGGAGTCTCATCTAAATTCAACAAA
TTACTAAATACTGGAATagATCCCAAACAAATTGACAGGTTGGATTTAAC
CACAGACGAAAGTCCATGGGAAGTAAAGACAATAACAAGTGCAatgaagc
aatattttagGAACCTATCAGAACCTGTTTTTACATTCAAACTACACGAT
GACTTTCTAAGCACATTAAAACTTGAAACAGCGGAAAAGAAAGTTGCAAA
ACTAAAAGAACTTGTCAATCAACTACCTAATGACAGAGGCAATGTTCTGA
ATAGGCTGATGTATCACTTGAAATTggtTGCAGGTCAAAGTAAACAAAAT
CTCATGCAAGAAAGTAATTTGGGAGTTGTGTTAGGCCCAACTCTAATGCG
CTCTAGGGAAGAAACAATGGCTGCCATTATGAGTATTAAATTTCAGAGTA
TTGTGATCGAAACGATGATCAAAGAGTATGATCAGattttcACAGATGGA
CCTCCTCAATCTTTATTGTCTTCAATCAGCAGtaacaataacaataacac
GGCAGCTCCTTTAAATGTGCCTGCAAATCCTATTGCTCCAAGAAGTCCTG
GTCGAAATTCCAAGAAGCGTGCGCCAGAACCGCCCACAGCAGCAACAAAA
CCAGTTGTGAAGTCGAGAAGTGAAGGTGAACCTGTGGGAGGCAAACCTCC
ACCACCAGAACGACCACAACCATATGCTGCTGGAAGGCCTGGTAAGATCT
CTTCAGATGatcaaaaagaaatattaaagaAGCAACACTCTACACCTGCT
AATAATCCTATCAAACCAAAATATCCTCCTCCAGGTCGCCCTCCAAACTT
GGGTGGTAGTCTAAAGAGATGGCCACATCTTGCAGCCAGACCTTCACCCA
ATGGTAAACCACTAATCCCTCTTAACGGAGACGATAAAATACGGCTTGCA
GAAACTGTCACTCCATTCACGTCACCCCCTGAAGACGACAGTGAAGCAAA
GAGTCGTCGCAACAGTTATGCAAAAGCTATGGATAAAATCGTGAAATCAG
TAGATGTTGCTGAAAGTGGTGGCGCTCCACCATTGAAAAGTCCTCCTCCG
ATTTCACAGAAACCCAAACTACAAAGTATCCAACAATCTTCTGCACCTTT
TGCTAACAATCAAATCCCTCCAAAACCTGGTGTCCCTCCTCCCCAAGTGC
CAAAGAGAAAAGAATGgaAAGTGAGAGCGTTATATGATTGTATCGCAGAA
AACACTTCAGAACTTTCTTTCAACAAGGGTGCTATCATTACAAATGttAA
AAGTTCAACCGAAGAGGGCTGGCTGATCGGAACATTAAATGGTCGCTCAG
GATTCGTGCCTGAAAACTATTGTGAAAAGTTTGAAGACTAACATAGAGCT
TTATAATATATTAATGTAATGATGTAACATAGGAAGTTTTATGACATATA
TTCTTTATTTTACCCCCTCTttaattattattgttattatagTAGTACAG
ATATTATTGTTATGATCTAGAATAATTTTTAACTTCTTTGCAAATACTGT
GTGAATCTGTTAGATTTGCAAGTCTATCAAGGAAGAAGGCTTTAAAAAGC
TTACAATTTAATATTATAACACTTtcgtcaaaaatttgaaatttttatct
ttcCTGGTAGTAATATTTAGATTTAGtagaatgttttaaatttcaatcca
ttttaaaagaattttttgggtgaaactttttgtaattttattatTGTAAT
GTCGAATAAactattaatttttgttttcacatCACCACTGTAATTAGCTA
CACTTATTACTTCAAATTGCATTATATTATTATGTTGTTGTTTTGTCGTT
TTGAcaatttatttctttattttttgttgtgtggtttgaattttgatttt
tgttcgtttttttttcaggattttatcttttaccaacagagaaattattt
ttgtattgttttttttgttcttttattattttattagaaTAGACCATATT
GTTATCTTTATCAGAAATAGAAAGAGATTTTAAACAGTTGATTTACCTCC
AATACCCCAAACTTCCCCCAAAACATGAAATTGCCCTC
Run BLAST on NCBI

transcript from alignment at scaffold_245:285975..295368+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054774 ID=TCONS_00054774|Name=TCONS_00054774|organism=Clytia hemisphaerica|type=transcript|length=9394bp|location=Sequence derived from alignment at scaffold_245:285975..295368+ (Clytia hemisphaerica)
GATAAACGAAAAAGTATGTATTATTttgtctgaaaatattttgaagtggg
aatttccccaaataataAAACCCGACCTTCCctaaactaatgaagcaatt
tcacacgtcgaaaattttgctgtaaatcATCTTAATCTTTTACATTGTAC
CCTAGACCTAATATTGCAAATACATCAAGATTTGTTTGACGATTCTTCAT
TAATATTCAGTAATTCAATAAGAATAGTCCTATCAACAAGTCTAAAAAAG
GTGATCTTCAGGTTTCATAAAACAACAAGTAGCAGAACCGTGTCTGAATG
ATAATTATACATTATATTTATATCTCAACAAAAAATCCTATTTCTGTTAG
GTGTTCTTGGGCCACAATGGGTCAAACACTACTGTTCATAtaccaaagaa
aacaaaattctcACAATGGTACCTTACACGCAAACAAATACAAAACTTGT
GAGTATTTACAAAACATTTAGTGGCACACAAACAGCTCAAGTTGTTGCAG
TAAAAGGCATAAAGTGCACTTCTTAAGAATTTAATGTTAAAACTACTAAC
AGTATGATATTGTATACTGTAAATTTTACAGTGCCTTGTTTTAAAACTAG
GTTTTCATATACTATCCTCTTCTACTAGCCGATGTTAACTTATATGATAA
ATATAATGAAttgatatattttcttttattgCTTTTAACTATCTCTTCTA
ATAATTTAGAATGCAAACACTGATACAATCATCGTTACATCATGTACCCG
GTAAGTTTTCACATAAATCACAATTGATATGATTATCCTatcgggtgcgc
cacaaaaaagtttctctctttgaaactgattttctcgaaatctaaaaatg
tttaaagaaccattcctattccattgagaagaagaaagataaacttaaat
tttaatgggtcatttattaaattcggttcattagatcaaaagttatgctc
aattgaataaaaaagttactttcagaaagtgcccgaaaacgttaaaaatc
gattCACATAAATCTTCACATTTTTTTCCCCATTCAGGAGGCCAACAGAA
TCTTCAGAACGAAGATTTTTATTTGACATCACTGGACAAGATCGCAGTCA
ACCATTAACTATGCAATGTTTGTCTGAAGATGATCGCAAACTATGGTTGG
AAGTTATGGAAGGAAAAGAACCGGTAATTAAAAGCATTGTGCATATAACT
CATTATGTGAACATCACTAATTAGATTGTACAATATGAAAATAAGATAAT
AATCATCAGTGGAGTGATTAATTTTTGCCTCGGTTTATTATAGATTTACA
TGGAATCAAATGAACTCAAACAAAATGATGGTATTACTTTATTTCAATCA
TCCATTTTTATCTGAGGTGTAGTTCTATTGTTCTGAAATCCTCCTTTACA
GGTGATCGGGGTTCGCACTTGAAATGTATGTTAGACATTATATCCGGTGT
GGTGACATATGAATAAAGACTTGCGAGAGCAAACTTTCGCTCTCGCTTGC
TTAAGTAATGTTGCCCCATGACTCTGTCGACTCACAACGACACAAGCACA
AGATACATGATGACTGATCAGTGCAAATATAGAAGATTATAGAATAGACA
GGATCACCCTTCCTTCTTCAtttgtattcaatttttcactttcaaaatcT
CATTCTTATAACGTTCTAATATGTTTTGTTTGTATTAAAATTTTAAGGTG
TTACAAACTTGGATCAAACAGGTCTTCAATTCATCTTGAAATGTATGGAA
GGCATTGAACGCCGaggtaaaaattttctttaattgaTTTAGGGTATGtg
agacacaaaattttgattaaattcTTGGTTTTTTGTTGTTAGTGATTTTC
ACATTAATaatgtgaaagttttaaagattttgtaaacttcaaattaaaaa
aagaaaggcTAAACTTTAAAATACCCATGATAGTTTTTCATATTATGTGT
TCTTTAATGTATGTTTTTTTACAGGTTTAACAGACCAAGGAATTTACAGG
ATAGCTGGAGTCTCATCTAAATTCAACAAATTACTAAATACTGGAATagg
tatttgaattttttacctATTTGATGTGACTAGGATGTGAGGGGATCGAT
TTCATTCAATTGTGGTTATCAtctgcaaaattaagttccaATGGAATTTG
AAACTTAGctcaggctgcatcatttgaggcgtgcgatagcacgcgcacac
ctccacacacacctaaaatgtctgaggagtgcgatcaatcacaccccata
aagtaagtttcacaactgaaagttgtgcatagcactccttatcacacgcc
taagttactaaaatttagattttaggagtgtgattgaccacacgcctgaa
attttcaaatgatgcagcctgacTTAGCTCTTGtcaaaatacaattttcc
tttcaaaatctACGGCTTTTCTGTAATTCGTTTTTGAACTCATTTTTAGA
TCCCAAACAAATTGACAGGTTGGATTTAACCACAGACGAAAGTCCATGGG
AAGTAAAGACAATAACAAGTGCAatgaagcaatattttaggtaaaaattc
attcaaatttaTTGTGATTGTCTTTTATTTAAGTGTTCGTCATTGGTGAC
TattgcaatatattttaactCTTTCctcttcaaatctttttttctagGAA
CCTATCAGAACCTGTTTTTACATTCAAACTACACGATGACTTTCTAAGCA
CATTAAGTAAGTTATGTTTTCTCCATGTATCATACGAGAAACGTTTTACT
CAAATGCTAGGAGATTAAATTCTTCTGTTTTCTTATCTTACTCTTTACTG
TTTGTTATCCAATATTCATTTTTAGAACTTGAAACAGCGGAAAAGAAAGT
TGCAAAACTAAAAGAACTTGTCAATCAACTACCTAATGACAGAGGCAATG
TTCTGAATAGGCTGATGTATCACTTGAAATTGTAAGAATTACTTTTtgtt
gaatgtatttttgtatAGCTTTTttttggaggtcctataaattaacccgt
gttcgttcgttcgttcgttcgtccgttcgttactagcttttctcgggatt
ggctcaatagtttttcctaatttttggcacaaagatgcaaaatggtaatg
cccaaaatgtgacggagcccgattttcgaaaaaaattcatttccggccga
agatgccggaaatatgccggaaaaaccggttttttggcattttctcgaga
tttcatcattagttttttctgattttttgcacaaagatgcNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgatttttgaa
gccggaactttctaaaaattgccggaacagccgattttcgccggaaaaat
ggtatttcttgaatttctcgagctgtactttatatttttttatgaaattt
tgcacactgatgtaaaatgacaatacctaaaaagtgatggagcccgattt
tcgaaaaacatttttttccggccgaaattgccggaaatatgcctgaaaaa
ctggttttggccgtttttgcagattttcgttagattttttccttgtattt
ctatgtttttcacacaaaacgTTATccataacaatgctcaccatcaagca
tgattcaattgtcaataaaactgatttttgcgaccagaactttctattta
ttttttccctacaacccttccctctccccccatcaacaatcaatgatgaa
tttattgcgttatgcattttcgctaaacgctatattttctgactgatttt
tttctcctcgcagtgttatctaactttcatcatcaggtaggtccattcag
catctagcttgtttagtACTAGTCTGAttaaattttttaacctttctaat
tttattttcagggtTGCAGGTCAAAGTAAACAAAATCTCATGCAAGAAAG
TAATTTGGGAGTTGTGTTAGGCCCAACTCTAATGCGCTCTAGGGAAGAAA
CAATGGCTGCCATTATGAGTATTAAATTTCAGAGTATTGTGATCGAAACG
ATGATCAAAGAGTATGATCAGGTATTGATATCATAAcagaattctcaata
tattttatccAGGTCTGACTTCATTCATCTTTTTTTATGTTGTCAAGGGG
AGTCAAATACAGTACACAAATATGATAACTTCAActtttgataactttat
taTAGCTGTAATGTTAGATGTTTTATGTCTtatttttcatagattttcAC
AGATGGACCTCCTCAATCTTTATTGTCTTCAATCAGCAGtaacaataaca
ataacacGGCAGCTCCTTTAAATGTGCCTGCAAATCCTATTGCTCCAAGA
AGTCCTGGTCGAAATTCCAAGAAGCGTGCGCCAGAACCGCCCACAGCAGC
AACAAAACCAGTTGTGAAGTCGAGAAGTGGTAAGCCTAAGAATAGAACTA
AGAGGGTTGTTATCATCAAAGACTTGGAAGTAAAACGTGATTCATATAAA
CtaataaacaaataaatttgACTGTGGACTGGCTGAATCTCAGAGTTTCG
GAAAAGTTAAAAGTTTCTCTATTCATTCGACTAATAACTAAATAGTTTTA
GTACCAGACTAGTATCTAACTTTATCTTTTTATAACAGAAAATTTATAGT
TCTCTTTATgaatcgaaacaaaaaggtttcaACTAAGACGTTTTTTAAAG
CTTTGATTATGTCTTGTAGATAACTTATTGTATTCAGCTTTGTAGATATT
TTAGAAAAACTGTGAAGAGATTTTTTAGCATGTCAttgattgaaataaat
tttttcctcAGTCATGTATGTCTAGGGTATTTTCATGAAATAGAAGATTG
ATAGCTTTTAAATATGAAGAAGATTTGACAAAAGGTTGCACTCATTGAAA
GTCATTCCAGGTAAGATTAGAAGATTATGTATTTTAGAGTTTCATTTTAA
ATCCTTAAAATTCAACTAACACCTCCTGCATTTTGTactttatattatat
tatattgtaTTCATTCTTCTGTTTCCTTCTATGCGTTTAAATCGCCGGTA
CTTCTTTAACCTTCTGTTTTTTTATAGAAGGTGAACCTGTGGGAGGCAAA
CCTCCACCACCAGAACGACCACAACCATATGCTGCTGGAAGGCCTGGTAA
GATCTCTTCAGATGGTAAGACCTCATTGATTCTTTATAATTTGTCTTGAT
GGATGGGATAGCAATATGGGAGTTGAAGGGAATTGGAACAAGTACTATTG
AGAAACCAGAGAAATTAATATCTATGACTCTTTATTGAACTAATTCATTG
ATTAATGAACTAATCTCTCATCAAACTTACTAATGATATTTTAgatcaaa
aagaaatattaaagaAGCAACACTCTACACCTGCTAATAATCCTATCAAA
CCAAAATATCCTCCTCCAGGTTTGCAATCCAAACTAATCTTTCATTTAAT
CCTGAGACTAATACTTCAGTTGACTAATAATACTTATCAGAATCCAGTCT
ATACTTATGAANTCCAAACTAATCTTTTATTTAATACTTACTTCAAAACT
AATACCTGACTAATAAGACCTATCAGAATCCAGTCTATACTTATGAAATC
TCACTCCTTTGTACAACAACAGTACTTTTACATCCTATTTTGAGATATCT
TTATTGCCTAGtgatttttggtaattttttttactcatTCCTTTCAGGTC
GCCCTCCAAACTTGGGTGGTAGGTAAGAAGGAGCTTTATATACTTAGGAT
TTGCTTATATACACCTCACTGAATGCTAACTTGCACTTGTGcgcttttcc
aggaaaaaattaaatatggaaggtagaggatataacattttttggaaatt
tatcccccggacattgtgacttttgatccccggacaagcatcagttgacc
cccggacattcataattacccctaaacagagcagttttgccccccccccc
aaacaaggtaaattttgtagatttttcactaacccccggacaatatattc
AATTTATCCTCCGATACCTCCCATGTACAATAATTTTCCGGAAGAGCCCA
ATGCATGTACGATAAAACACAATCACAACACAAACActacaaaaatcttt
ttggaaTGCCTTTCCAGCTCTTTTAACAAGCCTTGTATACTGAAAACCTC
TTTTAATGTACTTAATGTAATTATCGAGAGAAGATTATTGGTCTGCTACA
AATAAATAGGCTTGTGTGAGCGGGAAAGGCATTCCACTCACACAAATGCA
CAAACAACACACCAAAACACAAAGCTCTTTTTGATTAACGAAGCTGACTT
GTGATAACGTGTTATTTAGTCTAAAGAGATGGCCACATCTTGCAGCCAGA
CCTTCACCCAATGGTAAACCACTAATCCCTCTTAACGGAGACGATAAAAT
ACGGTACGACAACTACTTGTTCTGTTTGTGTTGAACTGTTCGTGTTATGC
ACAAAATTGTTGCAAGGTTTAGCACATGCATGACATTTTTCCTGTTTGGG
TTTTTCCAACACACTCTCAGCTTTCATGCATGTGTCTGTACCTTACAATA
ATATTGAAGGACCGACAAAAAAACATATCCTATCATTACATCCAATAAAA
CTGACATTTAATTGTATAATCACTGACGGTGAAATGTGATGACCGTGAAA
ATTGACTGTTGTATGCACCCACCTAACACATTTGCTCTGACTGTATATTT
TTCCTAAAACAGAAGCCTTTTTAATTAACAGTGCATATGgttcatttttg
ataaaaactttgAATTAATTTAGCTTGAAACGCTTTTCGTTCAATAGGCT
TGCAGAAACTGTCACTCCATTCACGTCACCCCCTGAAGACGACAGGTTGG
TGGTTTGAGCTGTTTACCAGAgagtttgaattttaaaatctcTTCAAAAA
TTTCTCAATCTATTTACAGAGAGCTAATATTTGTATTTTCGCCTGATTAA
TCCAAACCTGATACTAAATTTTATAGTGCCTCATAAATACTGAATAGATC
TAATAAAGGCAAATTTAGTTTTGGTGTAGGTCCAAACTATTTTCATAAAG
TTACTTTATCCTTTCTCACGTGTTTTTGGTAACATTTATATAATGCTTTG
TAACAAACTCGTTTATAGTGAAGCAAAGAGTCGTCGCAACAGTTATGCAA
AAGCTATGGATAAAATCGTGAAATCAGTAGATGTTGCTGAAAGTGGTGGC
GCTCCACCATTGAAAAGTCCTCCTCCGATTTCACAGAAACCCAAACTACA
AAGTATCCAACAATCTTCTGCACCTTTTGCTAACAATCAAATCCCTCCAA
AACCTGGTGTCCCTCCTCCCCAAGTGCCAAAGAGAAAAGAATGGTATGAC
TGAAAGAACCAACCTGTTTATTTCGTATTTATTTTAGTCATTTTAAATCT
gtttgtaaaataaaaagttagttGCTAGATGTTCGGTAGTCTTTTCTCCT
TTAACTTTTCTTAATTTCTTCTcaggttttggtcaatttcccTCCTAAAA
TTGTTTTAACAAAAACAAGtgtatttgcaaaaaaaagttttgttttgatt
ttcttctttttcaggaAAGTGAGAGCGTTATATGATTGTATCGCAGAAAA
CACTTCAGAACTTTCTTTCAACAAGGGTGCTATCATTACAAATGGTAATT
CATTTCAAATCTAAGAGTGGGAATGTGTTCGGTTAGACACCATAGCTCTG
ATACATCAGTTTATAAAACTCTTTCTTACTCTATTCTTATTTTCGTAAGC
ACCTTCGATCTattagaccatgttcgcacgtgacggttccgaagccattc
tattggttagaagtgacgtaacacttgaatgCAACCAATAGAATgattca
tttcgtttcggagcgaaacggaaccgtcacgtgcgaacatggtcttagag
gtcacccacatagtacgtacgcaaaaatTCGCGTAATTTTTAACAAAAGG
GAGGGGGCCTTGTACGCAGTGAACAGAATAAATGACGTAATGAAAACAAT
GGACGTACGCATGTGTTAAATCCCCGTCTTCGCCTTCTCTGCGTATACCT
TCCATATTGATGGTTTCTTACACCAGCCTTCGGCTATGAGAATTGGTTCT
TGATTTTTTCGTTGGCTGTGTATTCACGGTGTATTTCAATACAACTGACT
GTCTTGGTTTGTgatggtgtcaatttttttatattttgattttgtttttt
agttAAAAGTTCAACCGAAGAGGGCTGGCTGATCGGAACATTAAATGGTC
GCTCAGGATTCGTGCCTGAAAACTATTGTGAAAAGTTTGAAGACTAACAT
AGAGCTTTATAATATATTAATGTAATGATGTAACATAGGAAGTTTTATGA
CATATATTCTTTATTTTACCCCCTCTttaattattattgttattatagTA
GTACAGATATTATTGTTATGATCTAGAATAATTTTTAACTTCTTTGCAAA
TACTGTGTGAATCTGTTAGATTTGCAAGTCTATCAAGGAAGAAGGCTTTA
AAAAGCTTACAATTTAATATTATAACACTTtcgtcaaaaatttgaaattt
ttatctttcCTGGTAGTAATATTTAGATTTAGtagaatgttttaaatttc
aatccattttaaaagaattttttgggtgaaactttttgtaattttattat
TGTAATGTCGAATAAactattaatttttgttttcacatCACCACTGTAAT
TAGCTACACTTATTACTTCAAATTGCATTATATTATTATGTTGTTGTTTT
GTCGTTTTGAcaatttatttctttattttttgttgtgtggtttgaatttt
gatttttgttcgtttttttttcaggattttatcttttaccaacagagaaa
ttatttttgtattgttttttttgttcttttattattttattagaaTAGAC
CATATTGTTATCTTTATCAGAAATAGAAAGAGATTTTAAACAGTTGATTT
ACCTCCAATACCCCAAACTTCCCCCAAAACATGAAATTGCCCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034501XLOC_034501Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054774-exon-scaffold_245-1491911889:285975..285987TCONS_00054774-exon-scaffold_245-1491911889:285975..285987Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:285975..285987TCONS_00054774-exon-scaffold_245-1510915933:285975..285987Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:285975..285987TCONS_00054774-exon-scaffold_245-1575043694:285975..285987Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:286325..286422TCONS_00054774-exon-scaffold_245-1491911889:286325..286422Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:286325..286422TCONS_00054774-exon-scaffold_245-1510915933:286325..286422Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:286325..286422TCONS_00054774-exon-scaffold_245-1575043694:286325..286422Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:286684..286724TCONS_00054774-exon-scaffold_245-1491911889:286684..286724Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:286684..286724TCONS_00054774-exon-scaffold_245-1510915933:286684..286724Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:286684..286724TCONS_00054774-exon-scaffold_245-1575043694:286684..286724Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:287012..287147TCONS_00054774-exon-scaffold_245-1491911889:287012..287147Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:287012..287147TCONS_00054774-exon-scaffold_245-1510915933:287012..287147Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:287012..287147TCONS_00054774-exon-scaffold_245-1575043694:287012..287147Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:287268..287304TCONS_00054774-exon-scaffold_245-1491911889:287268..287304Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:287268..287304TCONS_00054774-exon-scaffold_245-1510915933:287268..287304Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:287268..287304TCONS_00054774-exon-scaffold_245-1575043694:287268..287304Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:287672..287740TCONS_00054774-exon-scaffold_245-1491911889:287672..287740Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:287672..287740TCONS_00054774-exon-scaffold_245-1510915933:287672..287740Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:287672..287740TCONS_00054774-exon-scaffold_245-1575043694:287672..287740Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:287949..288023TCONS_00054774-exon-scaffold_245-1491911889:287949..288023Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:287949..288023TCONS_00054774-exon-scaffold_245-1510915933:287949..288023Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:287949..288023TCONS_00054774-exon-scaffold_245-1575043694:287949..288023Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:288424..288514TCONS_00054774-exon-scaffold_245-1491911889:288424..288514Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:288424..288514TCONS_00054774-exon-scaffold_245-1510915933:288424..288514Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:288424..288514TCONS_00054774-exon-scaffold_245-1575043694:288424..288514Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:288622..288680TCONS_00054774-exon-scaffold_245-1491911889:288622..288680Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:288622..288680TCONS_00054774-exon-scaffold_245-1510915933:288622..288680Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:288622..288680TCONS_00054774-exon-scaffold_245-1575043694:288622..288680Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:288800..288905TCONS_00054774-exon-scaffold_245-1491911889:288800..288905Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:288800..288905TCONS_00054774-exon-scaffold_245-1510915933:288800..288905Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:288800..288905TCONS_00054774-exon-scaffold_245-1575043694:288800..288905Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:290286..290445TCONS_00054774-exon-scaffold_245-1491911889:290286..290445Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:290286..290445TCONS_00054774-exon-scaffold_245-1510915933:290286..290445Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:290286..290445TCONS_00054774-exon-scaffold_245-1575043694:290286..290445Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:290617..290803TCONS_00054774-exon-scaffold_245-1491911889:290617..290803Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:290617..290803TCONS_00054774-exon-scaffold_245-1510915933:290617..290803Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:290617..290803TCONS_00054774-exon-scaffold_245-1575043694:290617..290803Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:291452..291538TCONS_00054774-exon-scaffold_245-1491911889:291452..291538Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:291452..291538TCONS_00054774-exon-scaffold_245-1510915933:291452..291538Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:291452..291538TCONS_00054774-exon-scaffold_245-1575043694:291452..291538Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:291719..291793TCONS_00054774-exon-scaffold_245-1491911889:291719..291793Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:291719..291793TCONS_00054774-exon-scaffold_245-1510915933:291719..291793Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:291719..291793TCONS_00054774-exon-scaffold_245-1575043694:291719..291793Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:292072..292096TCONS_00054774-exon-scaffold_245-1491911889:292072..292096Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:292072..292096TCONS_00054774-exon-scaffold_245-1510915933:292072..292096Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:292072..292096TCONS_00054774-exon-scaffold_245-1575043694:292072..292096Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:292694..292777TCONS_00054774-exon-scaffold_245-1491911889:292694..292777Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:292694..292777TCONS_00054774-exon-scaffold_245-1510915933:292694..292777Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:292694..292777TCONS_00054774-exon-scaffold_245-1575043694:292694..292777Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:293172..293219TCONS_00054774-exon-scaffold_245-1491911889:293172..293219Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:293172..293219TCONS_00054774-exon-scaffold_245-1510915933:293172..293219Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:293172..293219TCONS_00054774-exon-scaffold_245-1575043694:293172..293219Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:293493..293717TCONS_00054774-exon-scaffold_245-1491911889:293493..293717Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:293493..293717TCONS_00054774-exon-scaffold_245-1510915933:293493..293717Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:293493..293717TCONS_00054774-exon-scaffold_245-1575043694:293493..293717Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:293939..294018TCONS_00054774-exon-scaffold_245-1491911889:293939..294018Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:293939..294018TCONS_00054774-exon-scaffold_245-1510915933:293939..294018Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:293939..294018TCONS_00054774-exon-scaffold_245-1575043694:293939..294018Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1491911889:294577..295368TCONS_00054774-exon-scaffold_245-1491911889:294577..295368Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1510915933:294577..295368TCONS_00054774-exon-scaffold_245-1510915933:294577..295368Clytia hemisphaericaexon
TCONS_00054774-exon-scaffold_245-1575043694:294577..295368TCONS_00054774-exon-scaffold_245-1575043694:294577..295368Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:285975..295368 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.231624	0	0.173554	0	0	0	0	0	2.02976	6.67832e-05	0	0	0.2069	1.9824	0.100056	0.6272	3.79336	0.688264	2.03329	6.07245e-06	0	0	0.347784	0	0	0	0	2.4047	2.92301e-06	0
Blast
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BLAST of TCONS_00054774 vs. Swiss-Prot (Human)
Match: RHG26 (Rho GTPase-activating protein 26 OS=Homo sapiens GN=ARHGAP26 PE=1 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.691e-83
Identity = 137/296 (46.28%), Postives = 196/296 (66.22%), Query Frame = 1 
Query:    4 KRKSVLGPQWVKHYCSYTKENKILTMVPYTQTNTKLNANTDTIIVTSCTRRPTESSERRFLFDITGQDRSQPLTMQCLSEDDRKLWLEVMEGKEPIYMESNELKQNDGVTNLDQTGLQFILKCMEGIERRGLTDQGIYRIAGVSSKFNKLLNTGIDPKQIDRLDLTTDESPWEVKTITSAMKQYFRNLSEPVFTFKLHDDFLSTLKLETAEKKVAKLKELVNQLPNDRGNVLNRLMYHLKLVAGQSKQNLMQESNLGVVLGPTLMRSREETMAAIMSIKFQSIVIETMIKEYDQIF 891
            + K   G  WVKHYC+Y +++K +TMVP+ Q +       +++I+ SCTRR T+S E+RF FD+   DR   +TMQ LSE+DR+LW+E M+G+EP+Y  SN+  Q++G   LD  G   I KC+  +E RG+ +QG+YRI GV+S+  KLL+  +DPK     + T   + WE+KTITSA+K Y R L  P+  ++    F+   KLE  E +V+++  LV++LP     +L  LM HL  VA   KQNLM  +NLGVV GPTL+R +EET+AAIM IKFQ+IVIE +I+ +++IF
Sbjct:  275 QEKRHFGTSWVKHYCTYQRDSKQITMVPFDQKSGGKGGEDESVILKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVY-NSNKDSQSEGTAQLDSIGFSIIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASETE-TDICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIF 568
The following BLAST results are available for this feature:
BLAST of TCONS_00054774 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG261.691e-8346.28Rho GTPase-activating protein 26 OS=Homo sapiens G... [more]
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