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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054869 ID=TCONS_00054869|Name=TCONS_00054869|organism=Clytia hemisphaerica|type=transcript|length=1513bp
ATAATAAGGTCAAATTTCATCAAGCCAAATGAATGAAACTAAAATCGATA
TTAAACCGTCTGAAATCCGAAACCTCTTCAGAAATCATTGACTTTTCTGA
CAGAGAGAAATAATGGGACATTTCGAAATGTGGCCGACAAATAACATTGG
ACAGGCACTTTAGAGTGTACCGATTGACGTCAACGGGTCGAGTGTCTAAT
TCTGACATCTTATAAAGAATAAAGGAGAAAAACATTAGCACTGGTTTCAT
TTTTCTGATGCGTGGGCTATGTCACAAGAAAAGTTGATCGAATCTTTTAT
CGACTGTGACACAGTTTTGACAAATGGTGGCGCTTTTAAAACGTGGGTCC
GAAAAAATGTGTCAAAGTAATATAATAATATGACAAAAAGAAGTTCTGAT
TTGCATAGATAAGCTGCTGGAAATATGCGTAGGCTACAAAGTGATAATAT
AAATACACTGTAATGAGATTTTGTAACACAAAAAGTTATGGAAAGAATTT
TGATCGAGTCCGAGCTGAGACGTGACGCAAAAAGCAACATGAGATAATTG
TGGAAAGTACTATAGTTTACTACTATGGGTTAGAAATTTACAAACATTTG
ACCGTAATGTTGTTAGATCATTAAAATACGATCTAAAAGCTCAACAAACT
TATAatcatgttttgatttgaaagcGTGTCCGATTGACGAACATATTGTG
AGAAATAACATATCCGAAAGCGAATGTCAAAACGTGGAATTTAAGTACGG
GGCCCTTTTATGGACCAAAGTGAGATATCCTCAAGAGGGGACTGGGACAG
ATATTCACGGAATGTGGAAGTGTGTTATTGGATAACGGAGTTGAGATTAA
GATGGAACTCATTCCTGAAGATTGCTCGTTTTGAGTGGAAATAGATCCTT
CGTCATTCATTGCGTATCTCTACTTGTAAGAAGTTCGAAGAGCATTTGCT
AAGAACATGGATATCTTTTACGATGCAAGTTGCATTCTAGCCACTAAAAG
ACACGATTCACATTGCTTCCAGGAAGGAAGGGACGATGTACAAAAGAGGA
AACTATAACAGTCACAGTCACAGTCAAACCATTGCTGTAGGTATAAGCAG
AAAACAATTTGGAATCAATTGCATGAAAATTCATATTAAGATTTACAATT
TCCGATGTTGATGATGCTGACAGAAAAGAAATCAGAAAGGAAAACTTTCA
ATTATCTGCCTGTCTACCAGCAAGCAGTGCCAAATCTGTGATGTCAAAGA
AAACGACTTGCAATTATTCGTAATTTACCTCCAAGTGGGAGGCTTTCGAT
AGCAAAGCGTCTTCAATCAGTAAAACGATTAAGTggttaattttcgaaaa
accagaAAGAATTTGTACAACAATTATCTCAAAAGCTGCTATTGAAAGAG
GAACTACATTTAGACTTGCATCTATTTGATTGCTGTCATTTATTCTGAAT
TGAACATTTAAACAATTAGGGTAACTGGATTATTTTATTTCCTATTGTTT
CAGAATGCTAAAA Run BLAST on NCBI transcript from alignment at scaffold_245:464013..465525 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054869 ID=TCONS_00054869|Name=TCONS_00054869|organism=Clytia hemisphaerica|type=transcript|length=1513bp|location=Sequence derived from alignment at scaffold_245:464013..465525 (Clytia hemisphaerica)
TTTTAGCATTCTGAAACAATAGGAAATAAAATAATCCAGTTACCCTAATT
GTTTAAATGTTCAATTCAGAATAAATGACAGCAATCAAATAGATGCAAGT
CTAAATGTAGTTCCTCTTTCAATAGCAGCTTTTGAGATAATTGTTGTACA
AATTCTTtctggtttttcgaaaattaaccACTTAATCGTTTTACTGATTG
AAGACGCTTTGCTATCGAAAGCCTCCCACTTGGAGGTAAATTACGAATAA
TTGCAAGTCGTTTTCTTTGACATCACAGATTTGGCACTGCTTGCTGGTAG
ACAGGCAGATAATTGAAAGTTTTCCTTTCTGATTTCTTTTCTGTCAGCAT
CATCAACATCGGAAATTGTAAATCTTAATATGAATTTTCATGCAATTGAT
TCCAAATTGTTTTCTGCTTATACCTACAGCAATGGTTTGACTGTGACTGT
GACTGTTATAGTTTCCTCTTTTGTACATCGTCCCTTCCTTCCTGGAAGCA
ATGTGAATCGTGTCTTTTAGTGGCTAGAATGCAACTTGCATCGTAAAAGA
TATCCATGTTCTTAGCAAATGCTCTTCGAACTTCTTACAAGTAGAGATAC
GCAATGAATGACGAAGGATCTATTTCCACTCAAAACGAGCAATCTTCAGG
AATGAGTTCCATCTTAATCTCAACTCCGTTATCCAATAACACACTTCCAC
ATTCCGTGAATATCTGTCCCAGTCCCCTCTTGAGGATATCTCACTTTGGT
CCATAAAAGGGCCCCGTACTTAAATTCCACGTTTTGACATTCGCTTTCGG
ATATGTTATTTCTCACAATATGTTCGTCAATCGGACACgctttcaaatca
aaacatgatTATAAGTTTGTTGAGCTTTTAGATCGTATTTTAATGATCTA
ACAACATTACGGTCAAATGTTTGTAAATTTCTAACCCATAGTAGTAAACT
ATAGTACTTTCCACAATTATCTCATGTTGCTTTTTGCGTCACGTCTCAGC
TCGGACTCGATCAAAATTCTTTCCATAACTTTTTGTGTTACAAAATCTCA
TTACAGTGTATTTATATTATCACTTTGTAGCCTACGCATATTTCCAGCAG
CTTATCTATGCAAATCAGAACTTCTTTTTGTCATATTATTATATTACTTT
GACACATTTTTTCGGACCCACGTTTTAAAAGCGCCACCATTTGTCAAAAC
TGTGTCACAGTCGATAAAAGATTCGATCAACTTTTCTTGTGACATAGCCC
ACGCATCAGAAAAATGAAACCAGTGCTAATGTTTTTCTCCTTTATTCTTT
ATAAGATGTCAGAATTAGACACTCGACCCGTTGACGTCAATCGGTACACT
CTAAAGTGCCTGTCCAATGTTATTTGTCGGCCACATTTCGAAATGTCCCA
TTATTTCTCTCTGTCAGAAAAGTCAATGATTTCTGAAGAGGTTTCGGATT
TCAGACGGTTTAATATCGATTTTAGTTTCATTCATTTGGCTTGATGAAAT
TTGACCTTATTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054869-exon-scaffold_245-1491911889:464013..465525 | TCONS_00054869-exon-scaffold_245-1491911889:464013..465525 | Clytia hemisphaerica | exon |
| TCONS_00054869-exon-scaffold_245-1510915933:464013..465525 | TCONS_00054869-exon-scaffold_245-1510915933:464013..465525 | Clytia hemisphaerica | exon |
| TCONS_00054869-exon-scaffold_245-1575043694:464013..465525 | TCONS_00054869-exon-scaffold_245-1575043694:464013..465525 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:464013..465525 . |
Blast
The following BLAST results are available for this feature:
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