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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054829 ID=TCONS_00054829|Name=TCONS_00054829|organism=Clytia hemisphaerica|type=transcript|length=624bp
GAGAGTACATACAATATGACCAGAATCATAAAACAGTTGTACTCTTGGTT
ATTTTTACTACTGttaattttagaataaaagtGCTAGTGGCAAAATAGGA
ATGAATTATGGCTCAATCCTTTGAAAATAGAATCAAGCTTCAGGAAACTG
CAAATATTTCAAGTGCTTCACTTAAAGACATAAATTGGCGAGTTAAGCTG
GTAATGTCAAGTGATAAATATGCAAACATCAGAGAACCAATAGCAGTAGT
TGAATTCCAATTACAGACTGAAGATGGAACAAGAAAACTAGAAACTTTAG
AAATGgataaaaatgaattaaaaacttTTCTGGATTCCTTAGAAGTGGCA
AATAAGACTGTCAATCAACTGAAGACCTGAAACTGTAGTAGTCATGGTTT
GGAATCTTCATCTATGGACTGTCTTCAGCAAAAATTCACatgcatttaat
ttttttaaaccttAGACAATAATTAATAATCATTTATCAAAAACTGTGGG
TGTCCACTGCAAAAAATAACTTTGTTGCAAATACCTgttgacaaaaaaat
aaatccagatATTTGTCTGGAATTAAAAGTTCATGGTTCTTTTTGTTCTT
TCTTGTAGAATGaaacacttttat Run BLAST on NCBI transcript from alignment at scaffold_245:602802..603830- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054829 ID=TCONS_00054829|Name=TCONS_00054829|organism=Clytia hemisphaerica|type=transcript|length=1029bp|location=Sequence derived from alignment at scaffold_245:602802..603830- (Clytia hemisphaerica)
GAGAGTACATACAATATGACCAGAATCATAAAACAGTTGTACTCTTGGTT
ATTTTTACTACTGTTAATTTTAGAATAAAAGTGCTAGTGGCAAAATAGGA
ATGAATTATGGCTCAATCCTTTGAAAATAGAATCAAGCTTCAGGAAACTG
CAAATATTTCAAGTGCTTCACTTAAAGACATAAATTGGCGAGTTAAGGTA
AAGGTTTTCATTTTGAACTTGAAGATTTACACATGTTAAGTTTTCAAACT
GCACTTAACTCTCTCCTCAAATCTTTGTTTTAAAGAAATAATTAAAGAAA
CTGTTCAATAATGTTCATCAACATGCAAATGGCAAAAACTTTCACCTTTG
ATGTATAGTAATATTCTCAAGGCTACTGTTTCTGACCGCAGCTTTATCCT
TAGTAAAATTATGTTAGCCTAATGATTAAAAAACATACTTTTACTATACT
ATATCTTCTAGCTGGTAATGTCAAGTGATAAATATGCAAACATCAGAGAA
CCAATAGCAGTAGTTGAATTCCAATTACAGACTGAAGATGGAACAAGAAA
ACTAGAAACTTTAGAAATGGATAAAAATGAATTAAAAACTTTTCTGGATT
CCTTAGAAGTGGCAAATAAGGTAATTATTGCCGATCAGTATTTTTTTAGC
TGTTTTTGTGTTTTGTTATTTTGTTCTGGAATAAATAATTGCTGCATTTT
TAAAGGCATGATGATGAGTCGATGTTGAGTCCTTGTTTACTTGTTTTTAT
TTCCTTTCTAGACTGTCAATCAACTGAAGACCTGAAACTGTAGTAGTCAT
GGTTTGGAATCTTCATCTATGGACTGTCTTCAGCAAAAATTCACATGCAT
TTAATTTTTTTAAACCTTAGACAATAATTAATAATCATTTATCAAAAACT
GTGGGTGTCCACTGCAAAAAATAACTTTGTTGCAAATACCTGTTGACAAA
AAAATAAATCCAGATATTTGTCTGGAATTAAAAGTTCATGGTTCTTTTTG
TTCTTTCTTGTAGAATGAAACACTTTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054829-exon-scaffold_245-1575043694:603634..603830 | TCONS_00054829-exon-scaffold_245-1575043694:603634..603830 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1575043694:603211..603369 | TCONS_00054829-exon-scaffold_245-1575043694:603211..603369 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1575043694:602802..603069 | TCONS_00054829-exon-scaffold_245-1575043694:602802..603069 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1510915933:603634..603830 | TCONS_00054829-exon-scaffold_245-1510915933:603634..603830 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1510915933:603211..603369 | TCONS_00054829-exon-scaffold_245-1510915933:603211..603369 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1510915933:602802..603069 | TCONS_00054829-exon-scaffold_245-1510915933:602802..603069 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1491911889:603634..603830 | TCONS_00054829-exon-scaffold_245-1491911889:603634..603830 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1491911889:603211..603369 | TCONS_00054829-exon-scaffold_245-1491911889:603211..603369 | Clytia hemisphaerica | exon |
| TCONS_00054829-exon-scaffold_245-1491911889:602802..603069 | TCONS_00054829-exon-scaffold_245-1491911889:602802..603069 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:602802..603830 - |
Blast
The following BLAST results are available for this feature:
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