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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054850 ID=TCONS_00054850|Name=TCONS_00054850|organism=Clytia hemisphaerica|type=transcript|length=727bp
GCTTGCGATCCAGCCTAAAGTTTACACGGTCATCTGAGGGATTTCAACGA
ATATATCCTTCTTCAATGTGATGTCTTTTCACCAATGAGATTGCAAGGAA
CTTAACTGATGCGAGATAATATAGAACATTACTATACCTTGATTTATTGA
GGAATAAGAGGTTGATCAAGGACTTTAACATCGATAACACTCTTCATTTC
TTTGGGTTGGTTGTCATAGTGAACAACACATGTATAATCACCCGCCATCG
TTTTACTGACATTTTTGAGGTTCAATGATGCAATGTATTGATTACAGCTC
TTTTTGCCTGGGGTAGGTGTTATTCTTGCTGTTGAGTCAATGGCTGAATC
TAAAGAACGAaaccgaaaattttctttttcatgcaATGCATACAAAGGCC
GTCATTGAAACTTCATGACACgaagactttttcataaaatacATATTATG
AATAGAATAACAGTTCTTTTTGCGCTTAGCGAATTGGTAGTTCACTAGAT
TTGTAAATTTCTACCAAAATAAGTGATTGTTGTAAATAGAGTGATATGTT
TTATTGAAATACACAATTAATCATATTCTTACTTGGTCCAATTTCCACAT
TGCTCGGTAAAACCCAGGAAACGGAAATATTCTTGGCAGAATTGACAACG
CATCCGACTTGTCTCTCACCCCCGATGTGTATTTCAGCTTCCTGAGAGCC
GGGAATGGTGAAGATTTTATCCTTGAT Run BLAST on NCBI transcript from alignment at scaffold_245:895304..896279- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054850 ID=TCONS_00054850|Name=TCONS_00054850|organism=Clytia hemisphaerica|type=transcript|length=976bp|location=Sequence derived from alignment at scaffold_245:895304..896279- (Clytia hemisphaerica)
GCTTGCGATCCAGCCTAAAGTGTATGAAAAGTTACAAAGATATTACTTTG
ATTCTTAATTTTAAGGTCTATCCGATCAGGAAATCCAGGATTATAAAGTT
GATAAATGTTAAGGAAATGTAAAAAGCTAGCTCAATATTTCCTTAATGAT
TTTCTAATGAACTAGTTGCTTCAAATTGCGTTCTTAATTTGTCACAATTA
TGGATAGAGCTCTATTATATCTCCTGATCAGACTCGGTAATGTGCTTCAT
TATTAACTTTCGTATTATAGTTACACGGTCATCTGAGGGATTTCAACGAA
TATATCCTTCTTCAATGTGATGTCTTTTCACCAATGAGATTGCAAGGAAC
TTAACTGATGCGAGATAATATAGAACATTACTATACCTTGATTTATTGAG
GAATAAGAGGTTGATCAAGGACTTTAACATCGATAACACTCTTCATTTCT
TTGGGTTGGTTGTCATAGTGAACAACACATGTATAATCACCCGCCATCGT
TTTACTGACATTTTTGAGGTTCAATGATGCAATGTATTGATTACAGCTCT
TTTTGCCTGGGGTAGGTGTTATTCTTGCTGTTGAGTCAATGGCTGAATCT
AAAGAACGAAACCGAAAATTTTCTTTTTCATGCAATGCATACAAAGGCCG
TCATTGAAACTTCATGACACGAAGACTTTTTCATAAAATACATATTATGA
ATAGAATAACAGTTCTTTTTGCGCTTAGCGAATTGGTAGTTCACTAGATT
TGTAAATTTCTACCAAAATAAGTGATTGTTGTAAATAGAGTGATATGTTT
TATTGAAATACACAATTAATCATATTCTTACTTGGTCCAATTTCCACATT
GCTCGGTAAAACCCAGGAAACGGAAATATTCTTGGCAGAATTGACAACGC
ATCCGACTTGTCTCTCACCCCCGATGTGTATTTCAGCTTCCTGAGAGCCG
GGAATGGTGAAGATTTTATCCTTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054850-exon-scaffold_245-1575043694:896259..896279 | TCONS_00054850-exon-scaffold_245-1575043694:896259..896279 | Clytia hemisphaerica | exon |
| TCONS_00054850-exon-scaffold_245-1575043694:895304..896009 | TCONS_00054850-exon-scaffold_245-1575043694:895304..896009 | Clytia hemisphaerica | exon |
| TCONS_00054850-exon-scaffold_245-1510915933:896259..896279 | TCONS_00054850-exon-scaffold_245-1510915933:896259..896279 | Clytia hemisphaerica | exon |
| TCONS_00054850-exon-scaffold_245-1510915933:895304..896009 | TCONS_00054850-exon-scaffold_245-1510915933:895304..896009 | Clytia hemisphaerica | exon |
| TCONS_00054850-exon-scaffold_245-1491911889:896259..896279 | TCONS_00054850-exon-scaffold_245-1491911889:896259..896279 | Clytia hemisphaerica | exon |
| TCONS_00054850-exon-scaffold_245-1491911889:895304..896009 | TCONS_00054850-exon-scaffold_245-1491911889:895304..896009 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:895304..896279 - |
Blast
The following BLAST results are available for this feature:
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