TCONS_00005431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005431
Unique NameTCONS_00005431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2981

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005431 ID=TCONS_00005431|Name=TCONS_00005431|organism=Clytia hemisphaerica|type=transcript|length=2981bp
TGAAAACAGAGTTGTGTGTGCAACGTATCTACGTTCACTTATAATTGAGA
AACGGACGCCAAAGGCAAAGTGAAAACCGCCCTTTAACCAACCCTTCACC
ACCCAACTCGAACACAGCTGAATATCAAAACCCAGTATACGATGATGGGG
CGTCTCTACCAAAAGAGGGCGACACACATTCCTTAATGGGCGTTCAATCA
ATCAAAACTGATTCAGACCACCATCCGCCAGAGGTGGAACTTGACAATGA
AGATGGTGATTTATTCGATATCAAAGCATTTGAAGAAATGGAACACGTGC
TCAATAAGATTGATGAAACAaagaaaagcaaagacttgaAAATTGAGGAG
TTAGATCGGAATAAGAAAGGAAATAACAGTGCCTCTAAATGGCGTTTTGG
ACCCGCCCCTATTGAAGATGGCGTTTCCGAAGGCGACGTTATGAAAATTG
GTTCTTTGGAAGGTACATTCAATCACAAGGAGAATAAAGTATTTAGTGAA
CTGAAAATTATGATGAAAAATCAACCCATGCATGAAGTAAATAACGAAGA
AGCCACGTCAGCACTTTTGAATTATTTTGCTGAATTGGGTGTCAGTGATG
AAGCCGTGCAAGTGGATTATACCTTTATTGAACAACTGTTGATCAGTGCA
GACATCAACTTACACGACAAGTACGGTCAATCATTAATGCACGAAGTGGC
GCGTGAATGGTCTCTTGATTTCGCAGAATATCTGAAACTACGGGGTGCCG
AACTTGACCATGCTGATAATTATGGGCGTACTCCCTTATTTGTGGCGGTG
GCTTCAAACCATGTTGAAATGGCTCGATGGCTGCTAGATAACAAAGCGAA
TATCAGTCAAAAAACGAAGGCGAATGAATCACAAACATTGATCCATTATG
CAGCCAAATATAATGCtattgattgttttgatttacttttggaGTATGGG
GCCGACCCTAATGAAGAAGATGGAAATGGACAAACACCGATTTTCCTAGC
TGCCTTATATGGTCGAAATCCGATTGCTCAGCATATGTTAAGAATCGGAA
TCAGTACTTTCTCAGTCAACGTAAGTGGTGTTTTATGCATCGAGTTGATT
GTACAGAATCTACCAACTGAAACTGCATGGCAAGCTTTGGAGCAATATTA
TGAAACGGATAATTTGAATCGACGAGAAGTTTACAATATGGTTGGTTTCA
GTAGAAGTTGTATGGCAAAAGTGGGTGGAGCTGCTAAGAAATATTCACCA
CCTAATTTGCTTGAGATTCTTGTGGACCAGCAAGATTTCGTATTAGTAAC
CAACCCCGTTGTTAACCAAATGATCAAGCTGAAAGGCAGAGTGTTCGCTA
CAAAATATCTACGTTTAAACGTCTTCTTGTATTTGTTATTTACGTTGCTA
TGGACAGCCTCGATTTCAATCCGAGAAACTAACCAATTTGGATGGACTTA
TAAAGTTTCGATGATTGTTGTTTTGACGATTTTTGGTGAAttgatttcat
ttcatttcatgtGGAAGGTCTACCGAGAATACAAATCCCTATTGAAAGCA
AATGATCACGAAAAAGAAAGATTACGCAATGACGTACGCGAACGGGAAAA
ACACGTCCATCCGAGATGGGAAGTGGAGGCCAACCTTTTGAATAAAGAGA
AAGATACTATTGAACGACGTTCAACGAATTATTGGAGTAACGGGTGGAAT
ATTATTGAAGTTACATGTCTTGTTTTGTCAGTTGTTCAATTCCTAATTGT
GATGTTATGGATTGGGCGACCAAGCACCCGTTACATTCActccatcaaaa
tttattactCCGCCGCTTTCCTTGTTGTAGTGTGGATCCGCCTCAACAAT
TGCTTTCACTACAGTCAAACTGTGGGCGCCTTTGTGGCCATGTTGGGCGA
ATGCGTTGTAGCAGTGGCAAGATTTGGCTTTTTATTCTTGGAATTTTTTA
TACCGTTCACATGTGCTTTTTGGGTACTCTTCGGCGGGAATAGAAAGGTT
CTTGACGGTAACGACGATGCATCAGGAGAGTATGTAGCGTTCGAGAATCT
GGTTTATCAAATGTATCTTCTGACCATTGTTGGTGATTATGATTATGGTG
ATTTAAAAATCATCAATGAAAATTTCGCACAAATTTTTGTCGGTCTGTAT
TTTGTGCTGGTCAGTGTTATCACACTGAATCTTTTCATCGCGTTGATGTC
AGAAGCCATTGCTCGAATCAACGAGAAAGCATCGGCTCAAGCTTATTTGA
AGGAAGCTGAAGAGATCACATTGATCGAGAAATATTTCCCAGTATATCGT
GATgagtttgaaaactttttgaaagagAAAGCAAACCCTTGGATTGTGAA
TGGTATCAGTGCAAGTGGAGATGACAGCGAAGGTCACGATCGAAAACTTG
TTCTCGTTGCAAAACAAATCTCTAAGTCCATGCAAGATAGCGTCAAGGAA
CTTCGTGAAACGAAAAAAAGTTTGGATGCGTTGGCTGAAAAGATTGAACA
GCTCGATTCACGACATCCTCGAGAAAAACGATTAGAAACGATTCAAGcaa
ttaataaaatttctaatttttacaATAAAGCTTTCAATAAAGTCcagaga
aaaactttttataaagtCACTGATTTTATTGAAGATGCTATAACTTCGAG
ACAATATCAATCATGATGAGATTATATACGTAAAAATGGATTATATCTTT
CTTATGAATAATGAACATGTAATTAATCAACCCCGTGATGTGAGTGTGTT
GCCCCTGTCACGTGAAATATAATCTGCAGCTGAGACGAAAATGACAGCAA
TTCTTAGCACAATTCAGTAGCGGTTTTTTGCGTGTTGAAAGTCATTTAGG
AGTGGAAtatatttcttcttcttcattttcatttttttctctaagTGGAA
ATATTCAACTAATCTTCCTTAttttttcaacgagcacaaatttTTTGTCT
CACCTGCATAGATTATATTGTGACAGATTTC
Run BLAST on NCBI

transcript from alignment at sc0000053:545492..556809+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005431 ID=TCONS_00005431|Name=TCONS_00005431|organism=Clytia hemisphaerica|type=transcript|length=11318bp|location=Sequence derived from alignment at sc0000053:545492..556809+ (Clytia hemisphaerica)
TGAAAACAGAGTTGTGTGTGCAACGTATCTACGTTCACTTATAATTGAGA
AGTATGCAGTTTTTCAACACTTATTAGCTGATGTCACTGACAGTACTAAA
TTGATTCTTGTctactttttcttaaaatcgtaTAGAAATTGAATCTTAGC
GTAACAGTACCTTAGtgatattttaggatgattgaatttcccaaaaaaag
ttaagaatatccatgatgaaatgtaAACACCATGGTAAGAACTTTCTGTG
CCAGCTAATATAGAATGCAACACGAGTATGCGTAAATAGTTGATCATgtg
attttcttcatttttctttcatttacaGACGGACGCCAAAGGCAAAGTGA
AAACCGCCCTTTAACCAACCCTTCACCACCCAACTCGAACACAGCTGAAT
ATCAAAACCCAGTATACGATGATGGGGCGTCTCTACCAAAAGAGGGCGAC
ACACATTCCTTAATGGGCGTTCAATCAATCAAAACTGATTCAGACCACCA
TCCGCCAGAGGTGGAACTTGACAATGAAGATGGTGATTTATTCGATATCA
AAGCATTTGAAGAAATGGAACACGTGCTCAATAAGATTGATGAAACAaag
aaaagcaaagacttgaAAATTGAGGAGTTAGATCGGAATAAGAAAGGAAA
TAACAGTGCCTCTAAATGGCGTTTTGGACCCGCCCCTATTGAAGATGGCG
TTTCCGAAGGCGACGTTATGAAAATTGGTTCTTTGGAAGGTGAGAATATG
TTCCTTTTGTTTGTTAAAATGAACTGGTTCATTCAATTTTGTCCCGGgtc
aaagttttggaaaaataaaatacacGGAGACACTGCACTGGTTTGTGTAG
AGTGTATATTCTCTAGGCCTTTTCAATATTAGACGTATTAAGGATATTGT
AAAGCCTGAATTACACGGTAGCGAGTGTGCAGAAAAAAACCGACTCTATT
ATAAGCTGCAGGGATTATCGTTACCTTTTAAAATTACGATTAGTTCTGCC
TATCCAGGGTTCATTACACGCAGTGCTGATGAGTCAGcaataaggacgaa
atgttTATGCTGCTCTGCCATCCAATCTCTTGAATCTCCTCGACtgtggt
cgcaaacttacttacttacattCTTCTTTATACTTTCAGGTACATTCAAT
CACAAGGAGAATAAAGTATTTAGTGAACTGAAAATTATGATGAAAAATCA
ACCCATGCATGAAGTAAATAACGAAGAAGCCACGTCAGCACTTTTGAATT
ATTTTGCTGAATTGGGTGTCAGTGATGAAGCCGTGCAAGTGGATTATACC
TTTATTGAACAACTGTTGATCAGTGCAGGTTGGTTTCATTTTTGTGTCTG
TCTATCATTTTTTCTTTGGGATTGGTTTCGTTAGTTTTGGGTTCagttgt
taaactttttcttttggaaaggtgGGTTTTGGCCTTCATCAACAGTTCTG
TATTGTTTTCTTCATATATCTCTATATGATTGAATTCTGAACATCCCCAT
TATTCACAGACCATGTGGGACCCCTGTCCAACTGGAAAAATtcgaccaaa
atatcgtccccagttgAAAATCATACTCCAAATTTTTCCcgctaaaaata
atcaaatgaacAAATCCTTACTgcaaatattgtgctattttttccattct
cactaaattttctgacttgaaaacaatattaAGTTCAaactccagccata
aaaaaggTGGAATATCAATTCTTATCGAGTTTCATTTCAATCTGTTACTT
TTACCCCGCTTGTTGAAACAAGCCTGATCTGTAAAAAAAGGGGTGCATga
atagactggagtcgttttataatgcgtgtaatacagtagtataggcgtta
tatgataagaCGATTATTATTACGgtatttagtttgtataaactaagaTT
TGTTCCCTCCATCacttttgctttatttctactatgtctgaattagtcgt
ctagcttagACTAGTGCTTGAACGAATCCATGAGATTACGGCGTAGCCGT
AAGAAACTAAACAACtttgtttttaaactttgatTCTAAAGTATCAGCTA
TAACAGAATTATATATAATACGAATTATTGTCCATGTGCCTGTCTGTCTT
ACTAATTGATACAATCTGTGTGATTTCAAGCATTGTTAGTACTAGGGTCT
CCCCTCATGGAATTCGGATTATAGAAAGTTTACTATATACTTAACCGCAA
AGCATTTTTTTACGTTAATTTAGACATCAACTTACACGACAAGTACGGTC
AATCATTAATGCACGAAGTGGCGCGTGAATGGTCTCTTGATTTCGCAGAA
TATCTGAAACTACGGGGTGCCGAACTTGACCATGCTGATAATTATGGGCG
TACTCCCTTATTTGTGGCGGTGGCTTCAAACCATGTTGAAATGGCTCGAT
GGCTGCTAGATAACAAAGGTAATAGCCCTTTTGTAAAGATATTTTCAAGT
GTTATGTTTTCTTTGTTGGCCACTTTATCCTTATAATCTCAAGAAATGTC
GAAATTTNAAGTGTTATGTTTTCTTTGTTGGCCACTTTATCCTTATAATC
TCAAAAAATGTCGAAATTTTATGGAGGAACTCGGAATTTTGATCCCTCTA
AAGACTTGAAAGTGATCATGATCTAAGGCTTGTAAACTTTATGAATATTT
CTCCTAGAAGATCTTATTGTCTACACAAGGTCATTAAAATGGGAATAATT
TAGGAGAGGGATAAAATTAAAAACGAAGGTTAGCCCTGGGCGGAATAAAC
ATTTACGGAGGAGTTTATAATTGTTAAAGACTCTACCACCGCTATTCTTT
TCCATCTACCGCCCATTGCGGCTGCAAATTTTGAGCACATGTTCCAGCTT
TCcacgaaatttttgaaatgtaatattttctttataGCGAATATCAGTCA
AAAAACGAAGGCGAATGAATCACAAACATTGATCCATTATGCAGCCAAAT
ATAATGCtattgattgttttgatttacttttggaGTATGGGGCCGACCCT
AATGAAGAAGATGGAAATGGACAAACACCGATTTTCCTAGCTGCCTTATA
TGGTGAGTTGACTCCTTTATGTTCGAGTTAatcgaccgtagtgcagtgtt
agagcattcggctacggtgcgcaaggttgtgggttcaacccccagtcata
ccaaagattctcaaaatggtacttgatgcctctctcgcttgatgctcagc
aattaagagaaggatcaaggttAAGTTGAGCAATCCAGGCAGAATTAGTA
GCGCCcttccctaccttcgggtagatagctatcgaaaaaggaaccttcgg
gtcgccttcgactgcggtcgcagacttacttactatgTTCTCTAAAGttt
cataaaaatgtttgataTTTTTACTTATCTCATCTATATAATGTGGCAGA
AACAAATAGTACACGGTTCCCAACCTCCTGCTAAAAACCACTGTGTACTA
AATCACCCTGCCCCAAATTTTACTTTCCAGCTTTATAACAAAGTTTTCAT
AAAAGCTAATAAAATCAAACGTCTAAGAAGTTTTTAAACAAGACTGTAGT
TGAATCCTGAAATTTTAGATTTGCTCTGTATTTTATTTTATGAGATTGAG
CTGATACTAAAATCCTCTTATTTCTTACAGGTCGAAATCCGATTGCTCAG
CATATGTTAAGAATCGGAATCAGTACTTTCTCAGTCAACGTAAGTGGTGT
TTTATGCATCGAGTTGATTGTACAGAATCTACCAACTGAAACTGCATGGC
AAGCTTTGGAGCAATATTATGAAACGGATAATTTGAATCGACGAGAAGTT
TACAATATGGTTGGTTTCAGTAGAAGTTGTATGGCAAAAGTGGGTGGAGC
TGCTAAGAAATATTCACCACCTAATTTGCTTGAGGTAATTCTGGTTTTAA
TATGATCTTAGCcagattttaatattttttcgcaAGCTTGGTTTCGGCTG
ATGATATTCCAATTTAATGCAGATTAAAGTGTATTTGTGAATTTTTAAAG
AGTTTTAAAGATGAGCTTAATACAAGCCTTTTCACCTGTTTTGAATGTGT
AAATTTGTCTATTTGGATAAACATTACTAGACAGACATTCCAGTGTAagg
gccggtctccacttgcgcgtgtTGCGATCAcacttttggcttcaatcctt
tttggttgggaaaaaagattacgtcataaaaatgtagcgcgcgctcgaag
aAAAAGTTAGTTAAACGCATTTCAGCTTTTTTCAAACGTTACGTCAGATC
ACGCCAATGGAGTtatttcgtttttctttttaccaatagcgtggaagctt
tgctcggaaaagtgcgatcgaagcgcgcaagtggagaccggccttaaggg
GGTGCGTTGCTTCACGTTCTTTTTTGACGTGATCTTATCAAAAGTGGCCT
AAGAGCACTGTGACATTTGTGTCATTTGAGACGATTCAATGGTCAAGTAT
CAGGTCCAGGAACTCTTGGAAAGCTTTAATTTCTCAAAACTGTTATTCCA
CTTACTCAGACCCTTGTCCATCATAACTGAGGAAACTTTTACTAACTCTT
TCCAACTTAAGGCTGGTATCCACTGTcacccatttcgcgcgaaagtggat
acCGGCCTTAACTGATTTAAATTTTCGtgagaaattgaaatttattgttt
aacatttttttatttttttttattttccaatttatttATTGTTGGTCTGC
CATAGTAATAATAAAATACTAATTAATACATTTAGATTCTTGTGGACCAG
CAAGATTTCGTATTAGTAACCAACCCCGTTGTTAACCAAATGATCAAGCT
GAAAGGCAGAGTGTTCGCTACAAAATATCTACGTTTAAACGTCTTCTTGT
ATTTGTTATTTACGTTGCTATGGACAGCCTCGATTTCAATCCGAGAAACT
AACCAATTTGGATGGACTTATAAAGTTTCGATGATTGTTGTTTTGACGAT
TTTTGGTGAAttgatttcatttcatttcatgtGGAAGGTAggcttctttt
ctttttgtcaatttccttaaaaacgttttatttttacacaagtgtttccg
tttcatatcagacacatatttcatatatcATTTCATCGCTGCTTCATAGA
GCTTTCAAACAGGCAAACGTACAGACaaatattaaaggttttatttttac
ataagtgtttcctgtttcatatcagacacatatttcataccaggacagtt
gttatattatgctgatataagcaaaaaacatgtttttattttcctttttc
tgaccaatcttgctccacatccgtgtcaatccaatgtaaaaaagcttgtg
aattaaaattgatgagaaagcaaacgatatcactcttattcaaaatcaaa
acctttCTAAAGTTATTGACGATCAATTGTCAAGAAGCAATGGTCAAGTG
CTCAAGGCGTCAGCACAGTTCATGCGCTAGATCCCAGCTCCTTTCAAAGA
TATCCACGAGCTAGATGGCCCGTGCGCCctgtgaaaataatcaaaagacT
GTTAAAAGTCATAGGTTACTGGGCTATCCATGTTTAATATAGACTCTTGT
AAGATTTCATTAAGGATATGATATTCTGTAGCAAATATATATATTGATCA
CCTGGTCTCTGAGGTAGTCTATActtataagtaagtaagtaagtttgtgA
CCGCAGTCGATGACGACCCAAAGACtcctgaaggtaggggagggcaccac
tctttacccttgatccttctcttaattgctgagcatcgtACAGAGAAGCa
acaagtaccattttgagaatctttggtatgacccaacTGGGgtttgaacc
cacaaccttgcgaaccgtagctgGATGTCCTTCCACTGCACCACGGTTCT
ACTAAATACTCTATTAGCTGGAAGTGTAATTATCATCGCAATGGCTCCAA
AAACATTACATAATCATGGCGTCGGGATATTCGGATAGCGTATCAATTTT
TAACGCTTTTATCTTTATTGGTCACTAAGATTATGTAATATTTCAGagtc
attacgtaatgtttttgCTGCTGATCTTTGGAGTTAAAATGGTGTCGCGT
CCTACAAAAAGTGTATTTACAAACACTTGTAAATTAAAATGTACTTGTTT
CCAAGTGataccagctggcacacaacgttgtttcaacgcttTTCTAATGT
TCGcaatgtccatataacgttaggtgNGCtggcaaacaacgttgtttcaa
tgctTTTCTAATGTTCGcaatgtccatataacgttgaaataacgttgttt
CCAAGTGATACAATGTTCATTTTTAGGTCTACCGAGAATACAAATCCCTA
TTGAAAGCAAATGATCACGAAAAAGAAAGATTACGCAATGACGTACGCGA
ACGGGAAAAACACGTCCATCCGAGATGGGAAGTGGAGGCCAACCTTTTGA
ATAAAGAGAAAGATACTATTGAACGACGTTCAACGAATTATTGGAGTAAC
GGGTGGAATATTATTGAAGTTACATGTCTTGTTTTGTCAGGTTGGTAACT
TTCAAAATGATTTTACAAgggtacaatcatggacaaaatatttgagacca
AGGCGGGTTCCCGGTGAAATTTGAAataccacaaatgatttttaagcgcc
ttaaactagagttggaaagtagagttttaactctgagctttaacatgaga
cttaacacttaggaccttaggatatcaggatttaaaagctcaaatttgct
caaataaggcttggaatatagcctagaagccactaacccctctaaaatcg
aaacattcaatgaaagaaagtggaagtgctaaaatagcaattctcacccg
aactttaaattctgaaaaacgttaaaatacactaaaatctcaatatattt
cgaccatgattatagtctcgaacctctataactcgaacgtcTCCATAACT
CAAGTTTTTTCTCGTCTCTTCAGTAAACAATGGCTTATAAACTTTTACTC
TGTAACTCGAAATTAGTGTTCCCCGTGTATATTCGAGTTATTAtcgagac
tctactgtataaaATATAAGATATGAGAACGGCGTACCGCTGGATGGAAT
TTTTTTCTAACGTCATCTGGAAACTTGCGGAAGTCTCTTATTGGATTAGT
CCTCTTACGTCTTTTAGCACGTAAGATGATCCGAAAATCAAgcaatatta
tcaaaattttcatttgctttctGTTTTACTTCAGTTGTTCAATTCCTAAT
TGTGATGTTATGGATTGGGCGACCAAGCACCCGTTACATTCActccatca
aaatttattactCCGCCGCTTTCCTTGTTGTAGTGTGGATCCGCCTCAAC
AATTGCTTTCACTACAGTCAAACTGTGGGCGCCTTTGTGGCCATGTTGGG
CGAATGCGTTGTAGCAGTGGCAAGATTTGGCTTTTTATTCTTGGAATTTT
TTATACCGTTCACATGTGCTTTTTGGGTACTCTTCGGCGGGAATAGAAGT
AGGttgatttttctctctttttcatcaaattttttctaaaatgttttgtt
tttgatgatattaaTGCCTTAAAAAATTCTCCTATAGAGTTTCAACGTTT
TAAACTTTTCTCGATTTACATTATACTAGATACCGTTAAATAAATCAAAC
TCTGCATCACTGGGTATAAACCTACCAAAATTAAAGTTTTGAAAGCCTCA
AAATGCACAGCTTAGCTAATACTGTCTtgcattttcttttaaattcattt
aTCTCTAACTAGGGTTCTgttcatcctctagcgaaaagagtttctAGGAA
GtttatctatagaggtctgcgattcagactgaTATCTGACTAACTAAGTC
TCTTcgcattttcttttcttcattcTTCAGAGGTTCTTGACGGTAACGAC
GATGCATCAGGAGAGTATGTAGCGTTCGAGAATCTGGTTTATCAAATGTA
TCTTCTGACCATTGTTGGTGATTATGATTATGGTGATTTAAAAATCATCA
ATGAAAATTTCGCACAAATTTTTGTCGGTCTGTATTTTGTGCTGGTCAGT
GTTATCACACTGAATCTTTTCATCGCGTTGATGTCAGAAGCCATTGCTCG
AATCAACGAGAAAGCATCGGCTCAAGCTTATTTGAAGGAAGCTGAAGAGA
TCACATTGATCGAGAAATATTTCCCAGTATATCGTGATgagtttgaaaac
tttttgaaagagAAAGCAAACCCTTGGGTGAGtataattacacccctgtc
taaTTGACCTGTTAAGAACCTTTTAGCCAGCGGGGAGGAAATCAATCTCT
GTAAATAGCTTAATgctaccgagtttatgtatcgggtgatatcgagggcg
acggtaagtgaaatcgatacaaaacaaagttgatagTTGATGTACGACGC
TATATCGccttgctcacctaaacagacgatggtattttggtgttttcacC
GTCTTTAAGCAAAGTGGACGGTAATTTTGgtgacatgtcaactttgcttt
ataccgtccccctcatTGATCTCAACtacatactttaatgggataaattt
tcgcggggattaattttcgcgaaattcgcggatttgggtgtcatccgcga
aaattaatccccgcgaaatcttaaaatttcgcggatgagctcaaccgcga
aatttaatccccgtgaaAATTTATCCAATTAAAGTAAACCCGCTACAAAT
GGAAATTATTAATTGGTGGTGATTTACAATTATTTACTTTGAAGCTGATC
CTCAGAATTACAGTGACTTACTCCTTTTGGGATGAAGATTCAAGAGTTTT
GCAGTGAGGCGACAAAATTTTAGGGTACTTTCCCCACCGGCAtgattttt
cagccaaactttcaataaaaaataaacgtaTTATTTTGGCTCCAAATACT
TTCCAAAAAGTACTAATGATCTTCTTCGCTTTCATTTTTTTAAGGGatac
ttttacattttttaaaatacCATAATACGAAATACATACCTTTTGTAATT
TTATGATTCAGGGACATAAGCCTTAAGTTTAGAAGTTCATATATCCCAGC
TATGGAAAGTAATTAGgtcaaaaatttaggttttCCTCAGGGCCGTAGTC
AGAAAAGTCGGAAAAATTCAAGTTTTCTTCTCATTAGAAAAAACTACATG
AGAACAtaaaggcttcaatggccaaaatatgaagaacaagataagaacat
tgTAAAGTTTTATGGGGACTCtgaaacacctgatttcttaggaatTTATA
CGCTAAAATactaacaaaacaaagaaaaattttttattttctattaatCG
ACAGATTGTGAATGGTATCAGTGCAAGTGGAGATGACAGCGAAGGTCACG
ATCGAAAACTTGTTCTCGTTGCAAAACAAATCTCTAAGTCCATGCAAGAT
AGCGTCAAGGAACTTCGTGAAACGAAAAAAAGTTTGGATGCGTTGGCTGA
AAAGGTAAGGAGTTGTTACCCTCTGATagaccatttcacagtcgaaataa
ATCATGGGTAATCGGGCCCCGATAACGGTTTCCCGTTAGTTAGAcgaaaa
accttcaaaaaatttcaaaactttggaccaatggTAGGTCGTTATTAGCG
TGCAGTGGTcatgattacccattacgctttgcgacagTAAAATGACCTAC
AAAACAGTAATTGACGTTCCCTATTTCGATTATCAAGGGAAATCGGATTT
CACAAACATAACGATCAACAAATTTAAGGGAAGTCTGCAATCTATGGTGG
ACTGAAAAACACTTCGAAAAATACTTCACTAATACACGTATTCAAGTAAT
GTTACATTTGTCACGAATGATGGCATGTGGCTTTTTATCACGGTAGAGGG
TGATGTGTAAGTTTAGTATGATAGTATGACACGCATTCATAATAAAGTGA
GGTTATGTTTCAAATAGTCATGGAAGTGTAGTATGAAATGTGTAAGTCGT
CGCTAATTACGCTTTGTATAGCACGAAGTAGATAGGGAAAGCCACATGTC
ATCATTCGTGACAAATGTAACATTACTTGAATACGTGTATTAGTGAAGTA
TTTTTCGAAGTGTTTTTCAGTCCACCATAGATTgtaaaattgccaaattt
aagagCGTCTTctacaatacacgttttttataagaacatccaaaaatttt
gaagcctttaaaaatgttcttaacatattcttattttgtgagtattttcc
TAAGATTTTACAATTTTAGTGCTTTATAGACCCAAAACACTCTATTGTTT
TACAAAGcgttagaatgttcttaacttgttcttaatattggccatatcga
agccttattttctCCTTTAGTTTGTGCttacaaaaaaacgtgtacctcaC
CACAATATGTCCTCCCTATAGTGCTCGGAATAACTCGATCACTGTGCATT
TAAGCTTTGTGACTCTACAGATATGAGCTGCTCAGTGACACTATTAGAGG
ACGGAGCTCACTGGGTCAGagacaatagcgagtttatgtattttgacttt
tgaagacGGTAGAGGGAATGTAGCCATTTGGattaacccgcagttctgac
ccgcaaaacgaggacggtaaaagtgttgATTTACTGTCgccctcagctgg
tcaggatctagtcaaattagaacatTACCGTCTCCGCCGCTAAAAaacac
acacatacataaacttggTATTGTCAAGTGATCGTAGAAATAATCTATCA
ATAACCTTGTATCGGATTTATAGGCTAATTATATTTCCTTATTATGAGCC
TATGAGAGATATTGCGATTTCAATACTTAATTGAGCTTGGACGAATATAT
AATAATGTTTCTAAGATTCGGCTTCCTTTGCTTGTCGTTTTGCCTCAATG
TTTCAAAATTCTTTCCATTCCGTTTTTAGATTGAACAGCTCGATTCACGA
CATCCTCGAGAAAAACGATTAGAAACGATTCAAGcaattaataaaatttc
taatttttacaATAAAGCTTTCAATAAAGTCcagagaaaaactttttata
aagtCACTGATTTTATTGAAGATGCTATAACTTCGAGACAATATCAATCA
TGATGAGATTATATACGTAAAAATGGATTATATCTTTCTTATGAATAATG
AACATGTAATTAATCAACCCCGTGATGTGAGTGTGTTGCCCCTGTCACGT
GAAATATAATCTGCAGCTGAGACGAAAATGACAGCAATTCTTAGCACAAT
TCAGTAGCGGTTTTTTGCGTGTTGAAAGTCATTTAGGAGTGGAAtatatt
tcttcttcttcattttcatttttttctctaagTGGAAATATTCAACTAAT
CTTCCTTAttttttcaacgagcacaaatttTTTGTCTCACCTGCATAGAT
TATATTGTGACAGATTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003093XLOC_003093Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005431-exon-sc0000053-1491911889:545492..545542TCONS_00005431-exon-sc0000053-1491911889:545492..545542Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:545492..545542TCONS_00005431-exon-sc0000053-1510915933:545492..545542Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:545492..545542TCONS_00005431-exon-sc0000053-1575043694:545492..545542Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:545820..546230TCONS_00005431-exon-sc0000053-1491911889:545820..546230Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:545820..546230TCONS_00005431-exon-sc0000053-1510915933:545820..546230Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:545820..546230TCONS_00005431-exon-sc0000053-1575043694:545820..546230Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:546631..546819TCONS_00005431-exon-sc0000053-1491911889:546631..546819Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:546631..546819TCONS_00005431-exon-sc0000053-1510915933:546631..546819Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:546631..546819TCONS_00005431-exon-sc0000053-1575043694:546631..546819Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:547715..547909TCONS_00005431-exon-sc0000053-1491911889:547715..547909Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:547715..547909TCONS_00005431-exon-sc0000053-1510915933:547715..547909Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:547715..547909TCONS_00005431-exon-sc0000053-1575043694:547715..547909Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:548379..548543TCONS_00005431-exon-sc0000053-1491911889:548379..548543Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:548379..548543TCONS_00005431-exon-sc0000053-1510915933:548379..548543Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:548379..548543TCONS_00005431-exon-sc0000053-1575043694:548379..548543Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:549122..549375TCONS_00005431-exon-sc0000053-1491911889:549122..549375Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:549122..549375TCONS_00005431-exon-sc0000053-1510915933:549122..549375Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:549122..549375TCONS_00005431-exon-sc0000053-1575043694:549122..549375Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:550227..550478TCONS_00005431-exon-sc0000053-1491911889:550227..550478Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:550227..550478TCONS_00005431-exon-sc0000053-1510915933:550227..550478Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:550227..550478TCONS_00005431-exon-sc0000053-1575043694:550227..550478Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:551768..551981TCONS_00005431-exon-sc0000053-1491911889:551768..551981Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:551768..551981TCONS_00005431-exon-sc0000053-1510915933:551768..551981Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:551768..551981TCONS_00005431-exon-sc0000053-1575043694:551768..551981Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:552676..552939TCONS_00005431-exon-sc0000053-1491911889:552676..552939Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:552676..552939TCONS_00005431-exon-sc0000053-1510915933:552676..552939Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:552676..552939TCONS_00005431-exon-sc0000053-1575043694:552676..552939Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:553322..553668TCONS_00005431-exon-sc0000053-1491911889:553322..553668Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:553322..553668TCONS_00005431-exon-sc0000053-1510915933:553322..553668Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:553322..553668TCONS_00005431-exon-sc0000053-1575043694:553322..553668Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:554746..554895TCONS_00005431-exon-sc0000053-1491911889:554746..554895Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:554746..554895TCONS_00005431-exon-sc0000053-1510915933:554746..554895Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:554746..554895TCONS_00005431-exon-sc0000053-1575043694:554746..554895Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1491911889:556321..556809TCONS_00005431-exon-sc0000053-1491911889:556321..556809Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1510915933:556321..556809TCONS_00005431-exon-sc0000053-1510915933:556321..556809Clytia hemisphaericaexon
TCONS_00005431-exon-sc0000053-1575043694:556321..556809TCONS_00005431-exon-sc0000053-1575043694:556321..556809Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:545492..556809 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.4876e-06	0.000118222	0.262751	0.000257584	0.000227973	0.000149559	0.315778	0.000953984	10.8608	10.863	11.09	10.8846	1.90748e-10	0	2.93211e-10	0	2.57187e-10	0	3.83851e-10	6.78943e-10	2.1722e-06	6.21082	0.267159	2.09744	2.7351e-09	0.0530085	0.653145	0.0317442	0.0907435	0.00797769
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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