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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055695 ID=TCONS_00055695|Name=TCONS_00055695|organism=Clytia hemisphaerica|type=transcript|length=991bp
TGGCCGCCAAAGCATGCtatgaaaacaaaatggccACAACTGACAGGCAA
AAAGCAAAAGGcagaaagaaaagcaaaacaagAAAGCAAAACCTACCAGC
CTGCCAGTATGAAAGCATTGTGAAATTTGTCTGAATTTCAAAGTCTGAAC
TTGACTATTGAAAGTATTGAATGTTGAccatattgaaaaaatttgagttt
taattTGAGCTCCTTACNAAACTTGAGTTGCATAGAAGGCGGGGGCAATG
GTGAGATTGTGTCTGGAGACAGGTGCCATTGCAACGTCTACGGCTCTTTT
CAACAGATAGCGACATCTTTGACATGATCTGCGTACCATCTTTACAAGTG
ACCGTCCCTCAATNTATGCAAGCCCTAGTCTAGCGTCATGTGGACTGGAC
ACCAAAAAGTGATGACTCATGAAAATGGTAGAAATGTAAACAATGTATAA
AATACAGACCtacattgaaaataaacattacCAAAATGACCTACATTGag
tataaaatgtaaacattgacaAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCAATGGATGTTGTTGACAATTGCTACTGCTACTGGTGAGAAT
TTGTCCAAAACAGGTACACGGAATGTTGATGAAGATAAGTCTCTCATTGA
ATTGGTAAATCAGCCAACAATTGTGATGTCATTAGTGTCAAGAATCCGAC
CGGTGTACTTCAGGATACTGTGTTGCTCTGATGTGATGTCCTTGATTCCT
TTTGATGGTAGAAACTTCTTGATCTCTTGGGTGGCTTTTCGGAAGAAATA
ATTCTTTGCAGNcataaagacaaaaaaaaaatttatttgatttttgaaaa
gttctttaaagtGTTCTTTCCCAATTCATAAAACAAATCAACTTCATCGA
CATGATTGATGATAACTAAATTTCGTGTGGAACGACGTGTCTCACGAAAT
ACTTTCTCATTAGCATTCATATAACGTACACTAGCATGACG Run BLAST on NCBI transcript from alignment at scaffold_256:101482..102472 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055695 ID=TCONS_00055695|Name=TCONS_00055695|organism=Clytia hemisphaerica|type=transcript|length=991bp|location=Sequence derived from alignment at scaffold_256:101482..102472 (Clytia hemisphaerica)
CGTCATGCTAGTGTACGTTATATGAATGCTAATGAGAAAGTATTTCGTGA
GACACGTCGTTCCACACGAAATTTAGTTATCATCAATCATGTCGATGAAG
TTGATTTGTTTTATGAATTGGGAAAGAACactttaaagaacttttcaaaa
atcaaataaattttttttttgtctttatgNCTGCAAAGAATTATTTCTTC
CGAAAAGCCACCCAAGAGATCAAGAAGTTTCTACCATCAAAAGGAATCAA
GGACATCACATCAGAGCAACACAGTATCCTGAAGTACACCGGTCGGATTC
TTGACACTAATGACATCACAATTGTTGGCTGATTTACCAATTCAATGAGA
GACTTATCTTCATCAACATTCCGTGTACCTGTTTTGGACAAATTCTCACC
AGTAGCAGTAGCAATTGTCAACAACATCCATTGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTtgtcaatgtttacattttatactCAATGTA
GGTCATTTTGgtaatgtttattttcaatgtaGGTCTGTATTTTATACATT
GTTTACATTTCTACCATTTTCATGAGTCATCACTTTTTGGTGTCCAGTCC
ACATGACGCTAGACTAGGGCTTGCATANATTGAGGGACGGTCACTTGTAA
AGATGGTACGCAGATCATGTCAAAGATGTCGCTATCTGTTGAAAAGAGCC
GTAGACGTTGCAATGGCACCTGTCTCCAGACACAATCTCACCATTGCCCC
CGCCTTCTATGCAACTCAAGTTTNGTAAGGAGCTCAaattaaaactcaaa
ttttttcaatatggTCAACATTCAATACTTTCAATAGTCAAGTTCAGACT
TTGAAATTCAGACAAATTTCACAATGCTTTCATACTGGCAGGCTGGTAGG
TTTTGCTTTcttgttttgcttttctttctgCCTTTTGCTTTTTGCCTGTC
AGTTGTggccattttgttttcataGCATGCTTTGGCGGCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055695-exon-scaffold_256-1491911889:101482..102472 | TCONS_00055695-exon-scaffold_256-1491911889:101482..102472 | Clytia hemisphaerica | exon |
| TCONS_00055695-exon-scaffold_256-1510915933:101482..102472 | TCONS_00055695-exon-scaffold_256-1510915933:101482..102472 | Clytia hemisphaerica | exon |
| TCONS_00055695-exon-scaffold_256-1575043694:101482..102472 | TCONS_00055695-exon-scaffold_256-1575043694:101482..102472 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_256 | supercontig | scaffold_256:101482..102472 . |
Blast
The following BLAST results are available for this feature:
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