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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055705 ID=TCONS_00055705|Name=TCONS_00055705|organism=Clytia hemisphaerica|type=transcript|length=430bp
cacaaaaaaattgacttcaattAATACTTTTCATTGATGTTCAACGTGAA
AGACGCTTTTCCTAGTTGTAAAAAAAGTACTGTCCTCATTGCTGGAGCTA
GAATAAATCAATGAACAATAATCATTGGATAATCTGGTCCTTCTTGGATC
TTTTTATGTTTCCATCAATCATTGGTTGAATTTTTTCCAGGGGATCATAC
TTCGTATTTTTTGATGAATGGCTGTTTGAAATTTAACCGGAAAATTAACA
ACGCGAAGAAAAAATTGGCAGAAAGTTATACAAAACTTTAAACTATGAAA
CTTAATGTAGAGTTAGtcacttttttattattattagtgTTTAGGAATTT
TAACTTACATCGTAATGTCAATTAATTATTTAATTTCAAGacgatgaaaa
taaagaaaagacgACGTAATTAACCATTCA Run BLAST on NCBI transcript from alignment at scaffold_257:112381..113358- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055705 ID=TCONS_00055705|Name=TCONS_00055705|organism=Clytia hemisphaerica|type=transcript|length=978bp|location=Sequence derived from alignment at scaffold_257:112381..113358- (Clytia hemisphaerica)
CACAAAAAAATTGACTTCAATTAATACTTTTCATTGATGTTCAACGTGAA
AGACGCTTTTCCTAGTTGTAAAAAAAGTATGGTATTATATATTCTTAAAT
TTTTATTTGTTCAGAAAATGTATCAATCACTCAATTTATTTCTTATTATC
ATCCTTAAAGATGTAAAGACGAAAGTTACAGATACATTCATTTTTTTATA
AACATACTAAAGCTCAAATTTCCAGAAAAATTAAGCATATGCTAAGCATA
CCTTGAGGCTCAGCCAAAGAAATTTTTAGAATCATAATTTCCAAAACTTC
AGAAAATAAAAGAAAAATGAAGAAGAGAATTACAAACAAAGTTGGTGATT
CGAAATCATATGGTAAACATTCGAAAACAATGCGCGAAACTTTTTACCTC
CCGTCCTTCATAATTTTTTTACCAAGCATATGGTTAAGCATAATTCGAGG
CTCAACATTGAGCTTTACTTAAGCATAGTGAGCTTCAGCCGAAATTTACC
GTAAATGCTTAAAAAGATGAGTGTATCCCAAACACCTTGCTCGTTGGTGT
AATGGAATTTAAATTATTAATTAGGCTATTTATATTGCAAAAAAAAATCT
ATACATTTATTTCCTTTTCTTCAGGTACTGTCCTCATTGCTGGAGCTAGA
ATAAATCAATGAACAATAATCATTGGATAATCTGGTCCTTCTTGGATCTT
TTTATGTTTCCATCAATCATTGGTTGAATTTTTTCCAGGGGATCATACTT
CGTATTTTTTGATGAATGGCTGTTTGAAATTTAACCGGAAAATTAACAAC
GCGAAGAAAAAATTGGCAGAAAGTTATACAAAACTTTAAACTATGAAACT
TAATGTAGAGTTAGTCACTTTTTTATTATTATTAGTGTTTAGGAATTTTA
ACTTACATCGTAATGTCAATTAATTATTTAATTTCAAGACGATGAAAATA
AAGAAAAGACGACGTAATTAACCATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055705-exon-scaffold_257-1575043694:113283..113358 | TCONS_00055705-exon-scaffold_257-1575043694:113283..113358 | Clytia hemisphaerica | exon |
| TCONS_00055705-exon-scaffold_257-1575043694:112381..112734 | TCONS_00055705-exon-scaffold_257-1575043694:112381..112734 | Clytia hemisphaerica | exon |
| TCONS_00055705-exon-scaffold_257-1510915933:113283..113358 | TCONS_00055705-exon-scaffold_257-1510915933:113283..113358 | Clytia hemisphaerica | exon |
| TCONS_00055705-exon-scaffold_257-1510915933:112381..112734 | TCONS_00055705-exon-scaffold_257-1510915933:112381..112734 | Clytia hemisphaerica | exon |
| TCONS_00055705-exon-scaffold_257-1491911889:113283..113358 | TCONS_00055705-exon-scaffold_257-1491911889:113283..113358 | Clytia hemisphaerica | exon |
| TCONS_00055705-exon-scaffold_257-1491911889:112381..112734 | TCONS_00055705-exon-scaffold_257-1491911889:112381..112734 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_257 | supercontig | scaffold_257:112381..113358 - |
Blast
The following BLAST results are available for this feature:
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