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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055882 ID=TCONS_00055882|Name=TCONS_00055882|organism=Clytia hemisphaerica|type=transcript|length=1042bp
ATCTTAGGCTGTTTTTCTTCTCTAAAACTTGAACGTCCCATAACTCGAAC
GACTACGTAGTCGTAGTATACTGGACTCTGCTTGAGCCACAAAGACTGGA
CTGTTGTACCAAaactcattactttttctacttTTCATAGCTTGTACCTA
GTTTGGAAGGTGGCGAAATCCTATGTTATGGAAGTAACAATCCAGTTGTC
GTCTTCATCGGTTCAATTTCAGTAACAAACGTTAAACTGGTCGATCAAGC
TCTCCAGGAAAATTATTTGGAATATTTGGATTTTCGCAGTGTATCAATGG
ACAATAGATCAAAACTGAGAATTTCATCGGTGAAGTCttgttttatcttt
attttttgggATTTCATTAGTAGGGCGTGTTTGGTTTTAGCAGTTTCTTT
TTGTATGATAAAATTTTGGATAGTCGTAATATCCCTCTTTATCGTAGAGA
TTCTGGTGGAATTCCAATGATCGATATTGAGTCGTTTGAACTGTGACTTT
AGTCCACCTTATTCATTTGTTCTTTTGATTATGGATATTACGATTATCAC
TTCAATTCAATGTACTTATGACAATTTACgagaaatttttctaaaaagct
tTATGCTACTTTtggtcagcattttttaaaccGAGTTTAATTAAGTTAGG
ATTCTGGTTAGCCAAGTATATATGAAAACTAACAGGTAAACGCTTAAACG
TGACGAAAAACAAGTCGCGTGCGAGCTGGAGGTTGACCCTGTTTTTTCCT
TCACAGCAAGTCATTTAAGCAAGTTTTCAACTTCACTTGCCCTCGGTCGG
TTAAGCACTCACGGTCAGTCTTCACGTAGCAGGTTGAAATCCAGCTGGGC
TACGTGTTCGTCGATGGCTGTCTTTAGGTTCCCGAAGGAATACCTCCCGC
CAGATCTTAACGCTGTTCATTACTTTTAAGAGTATACTCTTTTGagtaat
gacgtaatgtttcggtatcaaaaatacacattatttcaatacagttttac
tgtattttatatatcaaaaacaTATTATTTCAAACTCTGACC Run BLAST on NCBI transcript from alignment at scaffold_264:34318..35359 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055882 ID=TCONS_00055882|Name=TCONS_00055882|organism=Clytia hemisphaerica|type=transcript|length=1042bp|location=Sequence derived from alignment at scaffold_264:34318..35359 (Clytia hemisphaerica)
GGTCAGAGTTTGAAATAATAtgtttttgatatataaaatacagtaaaact
gtattgaaataatgtgtatttttgataccgaaacattacgtcattactCA
AAAGAGTATACTCTTAAAAGTAATGAACAGCGTTAAGATCTGGCGGGAGG
TATTCCTTCGGGAACCTAAAGACAGCCATCGACGAACACGTAGCCCAGCT
GGATTTCAACCTGCTACGTGAAGACTGACCGTGAGTGCTTAACCGACCGA
GGGCAAGTGAAGTTGAAAACTTGCTTAAATGACTTGCTGTGAAGGAAAAA
ACAGGGTCAACCTCCAGCTCGCACGCGACTTGTTTTTCGTCACGTTTAAG
CGTTTACCTGTTAGTTTTCATATATACTTGGCTAACCAGAATCCTAACTT
AATTAAACTCggtttaaaaaatgctgaccaAAAGTAGCATAaagcttttt
agaaaaatttctcGTAAATTGTCATAAGTACATTGAATTGAAGTGATAAT
CGTAATATCCATAATCAAAAGAACAAATGAATAAGGTGGACTAAAGTCAC
AGTTCAAACGACTCAATATCGATCATTGGAATTCCACCAGAATCTCTACG
ATAAAGAGGGATATTACGACTATCCAAAATTTTATCATACAAAAAGAAAC
TGCTAAAACCAAACACGCCCTACTAATGAAATcccaaaaaataaagataa
aacaaGACTTCACCGATGAAATTCTCAGTTTTGATCTATTGTCCATTGAT
ACACTGCGAAAATCCAAATATTCCAAATAATTTTCCTGGAGAGCTTGATC
GACCAGTTTAACGTTTGTTACTGAAATTGAACCGATGAAGACGACAACTG
GATTGTTACTTCCATAACATAGGATTTCGCCACCTTCCAAACTAGGTACA
AGCTATGAAaagtagaaaaagtaatgagttTTGGTACAACAGTCCAGTCT
TTGTGGCTCAAGCAGAGTCCAGTATACTACGACTACGTAGTCGTTCGAGT
TATGGGACGTTCAAGTTTTAGAGAAGAAAAACAGCCTAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055882-exon-scaffold_264-1491911889:34318..35359 | TCONS_00055882-exon-scaffold_264-1491911889:34318..35359 | Clytia hemisphaerica | exon |
| TCONS_00055882-exon-scaffold_264-1510915933:34318..35359 | TCONS_00055882-exon-scaffold_264-1510915933:34318..35359 | Clytia hemisphaerica | exon |
| TCONS_00055882-exon-scaffold_264-1575043694:34318..35359 | TCONS_00055882-exon-scaffold_264-1575043694:34318..35359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_264 | supercontig | scaffold_264:34318..35359 . |
Blast
The following BLAST results are available for this feature:
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