Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055966 ID=TCONS_00055966|Name=TCONS_00055966|organism=Clytia hemisphaerica|type=transcript|length=333bp TGAGACTTGTTTTAGATATATTCTTTGGTTACAATGTTCCCTCACACTCA TTTACACATTTACCCCAATATAAATAACTTGTTGTTTTTAAACAATATTC ACATCTTGAAGAAACACGCTTGTCAAGGTTTCGCTTTGCATGCAACATGG AGCTATAATAAAACGGCATATCGGAAACATCCACAAAATCTGTTCCAGAT ATTCTCTCGTCCTTTACTTTTCTATCTTCTTTGGGTTGGAAATTCTTGAG AGCTGCCCATAGAACTTGTAGTTGACACATACCCTTTCGTCTGCTGCTCT TACATTGATGCATCATTCGAAATAAATCATCCT Run BLAST on NCBI transcript from alignment at scaffold_266:46190..46580- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055966 ID=TCONS_00055966|Name=TCONS_00055966|organism=Clytia hemisphaerica|type=transcript|length=391bp|location=Sequence derived from alignment at scaffold_266:46190..46580- (Clytia hemisphaerica) TGAGACTTGTTTTAGATATATTCTTTGGTTACAATGTTCCCTCACACTCA
TTTACACATTTACCCCAATATAAATAACTTGTTGTTTTTAAACAATATTC
ACATCTTGAAGAAACACGCTTGTCAAGGTTTCGCTTTGCATGCAACATGG
AGCTATAATAAAACGGCATATCGGAAACATCCACAAAATCTGTTCCAGAT
ATTCTCTNCGCTATAATGAAACGGCATATCGGAAACATCCACAAAATCTG
TTCCAGATATTCTCTCGTCCTTTACTTTTCTATCTTCTTTGGGTTGGAAA
TTCTTGAGAGCTGCCCATAGAACTTGTAGTTGACACATACCCTTTCGTCT
GCTGCTCTTACATTGATGCATCATTCGAAATAAATCATCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00055966-exon-scaffold_266-1575043694:46403..46580 | TCONS_00055966-exon-scaffold_266-1575043694:46403..46580 | Clytia hemisphaerica | exon |
TCONS_00055966-exon-scaffold_266-1575043694:46190..46344 | TCONS_00055966-exon-scaffold_266-1575043694:46190..46344 | Clytia hemisphaerica | exon |
TCONS_00055966-exon-scaffold_266-1510915933:46403..46580 | TCONS_00055966-exon-scaffold_266-1510915933:46403..46580 | Clytia hemisphaerica | exon |
TCONS_00055966-exon-scaffold_266-1510915933:46190..46344 | TCONS_00055966-exon-scaffold_266-1510915933:46190..46344 | Clytia hemisphaerica | exon |
TCONS_00055966-exon-scaffold_266-1491911889:46403..46580 | TCONS_00055966-exon-scaffold_266-1491911889:46403..46580 | Clytia hemisphaerica | exon |
TCONS_00055966-exon-scaffold_266-1491911889:46190..46344 | TCONS_00055966-exon-scaffold_266-1491911889:46190..46344 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_266 | supercontig | scaffold_266:46190..46580 - |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055966 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
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