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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056048 ID=TCONS_00056048|Name=TCONS_00056048|organism=Clytia hemisphaerica|type=transcript|length=1275bp
TGGAAATGCTGAAGTTTCTCAATATTTGCCTTATTTTCATCTTGCAAGAG
TCATTTTATTCAAGTATAAGTATGGTATTTGACAAAATCTTGATGGAAAG
GTTTGAATCATTTTattgtaaaattgtgaagatTTCTGTGTCCAATCCTT
GACcacaaatttgtcattttttacaGCTTCTGTTCTACTTTTGATGCTTT
TTCTTATTCGAACCAGAAAATTCAATTCTAAAGACCTAGGGCTATCAATT
TAAGTTACTCTAAGTTACAGGGCATGAAAAGCTCACTGAATTTTGAGACA
ATCTTCTACCAACTGACtgaattttatgattttcacaCCCAATTCTCATT
ATTATTTGATTGGTTTTCCGACAGGACACTACAGGAGCTTTATAAAATCG
TCTTGAAAAACACCTTGAACACCAGAGATGAGACTGAATGGTACAGAAAC
TTTCCTGGGTTTCATGTGATGCATTTAAGCTTGGACTTTGTGGAGAAAAT
TGAGGTTGATTTATGGAAATCTCAGGAACACAAGAAATACTGAAAACAGg
cccctgccgacgcaccggacttaacgaacaccggacacgcgaaagtccgg
tgtaaaatgagaatttttttaccaccggaccatctctacaccggacttga
ggaagtcggatgtccggtgtcggagaagggtgcttttttccaccggacaa
tcaaaacaccagacatgaccagtccggttcgtaatcataaatgtccggcg
tccaaaattccccgtatgcaacaccggactgacaccggacttattgcgtc
cggtgtggtgaaaggatactttttaccaccggacaaatacaccggacagt
ccggtgcgtcggcagggtcctctgAAAACACACCACCTTGAGAGGTGAGG
TGTTtttgggaaattattttttgccaaaaacacccAAAATAATCATGAAA
GGTTTAGAAAAGGTGTTTCAGTTAAAGTGTTTTAGggttttcatgatttt
tttgacatgaaaggttcagaCTCAAAGTTGTGTGGCGGTTTTCTTCTTTG
CTTAAAAGAAGCaagcaggctagctctaaagctctaaaacagcatctaat
aacatgaaaactagaatatgatttttcaatgggaatcgaaactataaagt
gcacttacaaaggGGATGTCGACAATCGTCAGTCCTTTTTTTTATCGGCT
TCAGGCCGTAATTACgtaagggggagggggtccaCAGGTGTTTGCCATAA
GCAAAAGTTGGTAATGCAAAGTCTC Run BLAST on NCBI transcript from alignment at scaffold_266:381782..383056 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056048 ID=TCONS_00056048|Name=TCONS_00056048|organism=Clytia hemisphaerica|type=transcript|length=1275bp|location=Sequence derived from alignment at scaffold_266:381782..383056 (Clytia hemisphaerica)
GAGACTTTGCATTACCAACTTTTGCTTATGGCAAACACCTGtggaccccc
tcccccttacGTAATTACGGCCTGAAGCCGATAAAAAAAAGGACTGACGA
TTGTCGACATCCcctttgtaagtgcactttatagtttcgattcccattga
aaaatcatattctagttttcatgttattagatgctgttttagagctttag
agctagcctgcttGCTTCTTTTAAGCAAAGAAGAAAACCGCCACACAACT
TTGAGtctgaacctttcatgtcaaaaaaatcatgaaaaccCTAAAACACT
TTAACTGAAACACCTTTTCTAAACCTTTCATGATTATTTTgggtgttttt
ggcaaaaaataatttcccaaaAACACCTCACCTCTCAAGGTGGTGTGTTT
Tcagaggaccctgccgacgcaccggactgtccggtgtatttgtccggtgg
taaaaagtatcctttcaccacaccggacgcaataagtccggtgtcagtcc
ggtgttgcatacggggaattttggacgccggacatttatgattacgaacc
ggactggtcatgtctggtgttttgattgtccggtggaaaaaagcaccctt
ctccgacaccggacatccgacttcctcaagtccggtgtagagatggtccg
gtggtaaaaaaattctcattttacaccggactttcgcgtgtccggtgttc
gttaagtccggtgcgtcggcaggggcCTGTTTTCAGTATTTCTTGTGTTC
CTGAGATTTCCATAAATCAACCTCAATTTTCTCCACAAAGTCCAAGCTTA
AATGCATCACATGAAACCCAGGAAAGTTTCTGTACCATTCAGTCTCATCT
CTGGTGTTCAAGGTGTTTTTCAAGACGATTTTATAAAGCTCCTGTAGTGT
CCTGTCGGAAAACCAATCAAATAATAATGAGAATTGGGtgtgaaaatcat
aaaattcaGTCAGTTGGTAGAAGATTGTCTCAAAATTCAGTGAGCTTTTC
ATGCCCTGTAACTTAGAGTAACTTAAATTGATAGCCCTAGGTCTTTAGAA
TTGAATTTTCTGGTTCGAATAAGAAAAAGCATCAAAAGTAGAACAGAAGC
tgtaaaaaatgacaaatttgtgGTCAAGGATTGGACACAGAAatcttcac
aattttacaatAAAATGATTCAAACCTTTCCATCAAGATTTTGTCAAATA
CCATACTTATACTTGAATAAAATGACTCTTGCAAGATGAAAATAAGGCAA
ATATTGAGAAACTTCAGCATTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056048-exon-scaffold_266-1491911889:381782..383056 | TCONS_00056048-exon-scaffold_266-1491911889:381782..383056 | Clytia hemisphaerica | exon |
| TCONS_00056048-exon-scaffold_266-1510915933:381782..383056 | TCONS_00056048-exon-scaffold_266-1510915933:381782..383056 | Clytia hemisphaerica | exon |
| TCONS_00056048-exon-scaffold_266-1575043694:381782..383056 | TCONS_00056048-exon-scaffold_266-1575043694:381782..383056 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:381782..383056 . |
Blast
The following BLAST results are available for this feature:
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