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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056053 ID=TCONS_00056053|Name=TCONS_00056053|organism=Clytia hemisphaerica|type=transcript|length=1084bp
ATAAGGGATAAAATTAGCATCGAATGTCGAGTCAATGGTTTAGAAATCTA
AATTCAGGGCACTAATTTTATCAATAGAAACAACAGTATCTTCAATAGAT
GTTGCTTCTTTTGGAAGGCTGTTCCTTAGTTGAAccatatttggaaaaaa
agacaTTGTGTAGGACTGGATTGAGCCCtgtatttgtttatattttacgT
TTTTACAACGCTGTCTTGTGGGGAGGATTGATTTGTCGACGTGTTTTGAA
CCAGACGATATTGTGAAGAAATTTGAGACAGTTGATTTTGCGACAATTTT
AAAGTGTATCCAAATCAGCATCTTTCAATAACGAAGTGCGTGAACATTCC
CTGTCCCACCTTTTGTAAATCCAACGGATGGATTTTCGTTGGACGCTTTC
TGACTGTGATATTATATTCAATTTCCCAGGTGAGTCCCATACTGAAGATG
CATATTCTACTAAGGGTCTGATGTATGTCTAATAGCAAACGAGACGAGTT
TCTGTGTCTGTcatttgaagattcctttgaagAAATATCTGGTGGAATTT
GCCTTAGCAGTGATGACTGAAACATGATGTTTCCAAGAGAGATTCTTGGA
AATGGTTACTCCAAGGTATTTCGCTTTATCAACTGCTTTCTAGTTTTGAC
CATGGATTGTATAGGTGTGGTCAATGATTTTATGTCTGTTTGTTATGCAA
AGTATATAGCATTTTCCCGGGTGGAACTCCATTGACCATTGCTTTTCCCA
TTCCACTAACTTGTCAAGGTCTACTTGTTGTAATGAATATGCATCATTTA
GGCATTTGATTACTTTGAATAAGTAGGAATCGTCAGCAAACAAAACAATA
TTTGAATCAACATGCAAGGACATATCGTTTATATAAACAAGAAattgtga
tcgaagtaatcaataatgatcgataataatcgaaggtGGTCTATCGATTT
TATCAGTGATTTAAATACTTATACTCAATTCCAGATTACTGTAtggcatt
ttctcaattttcgaTTTGTTCAATCAATTCATTTCGATTACTTTTCGATT
ACCTTTGATCATATTGAAAGGATTGAATGATAAA Run BLAST on NCBI transcript from alignment at scaffold_266:582445..583528 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056053 ID=TCONS_00056053|Name=TCONS_00056053|organism=Clytia hemisphaerica|type=transcript|length=1084bp|location=Sequence derived from alignment at scaffold_266:582445..583528 (Clytia hemisphaerica)
TTTATCATTCAATCCTTTCAATATGATCAAAGGTAATCGAAAAGTAATCG
AAATGAATTGATTGAACAAAtcgaaaattgagaaaatgccaTACAGTAAT
CTGGAATTGAGTATAAGTATTTAAATCACTGATAAAATCGATAGACCacc
ttcgattattatcgatcattattgattacttcgatcacaatTTCTTGTTT
ATATAAACGATATGTCCTTGCATGTTGATTCAAATATTGTTTTGTTTGCT
GACGATTCCTACTTATTCAAAGTAATCAAATGCCTAAATGATGCATATTC
ATTACAACAAGTAGACCTTGACAAGTTAGTGGAATGGGAAAAGCAATGGT
CAATGGAGTTCCACCCGGGAAAATGCTATATACTTTGCATAACAAACAGA
CATAAAATCATTGACCACACCTATACAATCCATGGTCAAAACTAGAAAGC
AGTTGATAAAGCGAAATACCTTGGAGTAACCATTTCCAAGAATCTCTCTT
GGAAACATCATGTTTCAGTCATCACTGCTAAGGCAAATTCCACCAGATAT
TTcttcaaaggaatcttcaaatgACAGACACAGAAACTCGTCTCGTTTGC
TATTAGACATACATCAGACCCTTAGTAGAATATGCATCTTCAGTATGGGA
CTCACCTGGGAAATTGAATATAATATCACAGTCAGAAAGCGTCCAACGAA
AATCCATCCGTTGGATTTACAAAAGGTGGGACAGGGAATGTTCACGCACT
TCGTTATTGAAAGATGCTGATTTGGATACACTTTAAAATTGTCGCAAAAT
CAACTGTCTCAAATTTCTTCACAATATCGTCTGGTTCAAAACACGTCGAC
AAATCAATCCTCCCCACAAGACAGCGTTGTAAAAAcgtaaaatataaaca
aatacaGGGCTCAATCCAGTCCTACACAAtgtctttttttccaaatatgg
TTCAACTAAGGAACAGCCTTCCAAAAGAAGCAACATCTATTGAAGATACT
GTTGTTTCTATTGATAAAATTAGTGCCCTGAATTTAGATTTCTAAACCAT
TGACTCGACATTCGATGCTAATTTTATCCCTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056053-exon-scaffold_266-1491911889:582445..583528 | TCONS_00056053-exon-scaffold_266-1491911889:582445..583528 | Clytia hemisphaerica | exon |
| TCONS_00056053-exon-scaffold_266-1510915933:582445..583528 | TCONS_00056053-exon-scaffold_266-1510915933:582445..583528 | Clytia hemisphaerica | exon |
| TCONS_00056053-exon-scaffold_266-1575043694:582445..583528 | TCONS_00056053-exon-scaffold_266-1575043694:582445..583528 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:582445..583528 . |
Blast
The following BLAST results are available for this feature:
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