TCONS_00056157 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056157
Unique NameTCONS_00056157
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056157 ID=TCONS_00056157|Name=TCONS_00056157|organism=Clytia hemisphaerica|type=transcript|length=1161bp
TCAAGCTCCAATCAATATTTTGATGGTGGATGCATGCAGGATGGTTGTCT
GCTAAGAAGACTAGGTTGTCTTCTCACCCATAGTCATAGATCATCTTGTg
tttaaatgataaaaaataatacAGAATCTAAGAATGGATATCAAATAAGA
ACCGTACAATTGGTTAAGAAGAGATTGGTTCGAACAATGTGGGGGGATTC
TCGTGGTATCAAATAGTTTCCGATTCTTCCGACGCAACCCGGGAATGAAT
CCCGATTCTGACAGCATAAAATGGGTCATAACCAAAGATGATTACAGCAC
AGCAAGTATCCTCAATGAAATCCAAAAACTACCCGAACCCAAATATTCGG
CATTTGGCGAACGTATCCGCCATGTTGCGCCCACCGCCATGCAATGCTCC
ATGTTTTGTGGTGGCAAACAATGTAAATATTGTAACCCTGCCAGGTTCAA
GAAAGAACCCAATCAAGATGCTATAAATGGGCTATACTCTGCTTGggtga
cgtcaaatattttggCCACTTCCCGACCTTCCACCACTGCTATAAAACAA
TACAACATCATCGAACagtttcaaaaGAAGGAAATTCGTTCCATCATCAA
CTTACAACATCCAGGCGAACATGCAGCCTGTGGTTTTGGATTGGAGGCTG
GTGGATTCACCTACGTCCCTCAAGACTTCATGGATAATGATGtatttttc
taCAATTTTGGATGGAACGACTATGGCGTCCGATCTTTGCAGTCTATTTT
GGATATGGTCAAAGTATTCGACTTCGCGTTATCCAAGGGGAAAGCGGCTG
TTCACTGTCATGCTGGacttgggcggacgggcgttctCATAGCATGCTAC
TTGATTTATTCCATGAGACTAACCTCGCATGAAGCCATTATGAAAGTGAG
AGAAGCACGGTAAGCTTGGTCGTTCAAAGCCAATACTTGGAAAGAAATTC
GACACTATTCTGAGATCCGATTGATTAGTGATTTGAAttgaaataaacca
gccgaggctggaaggtcagccaatagagcttagctagatagctttaataa
gtgcgttaacagatgtaagagatgtactgaaacagagtagactaaaaatg
ttgaataatgtacaaaatgtgaaacatttgataacttgatttaaaattat
ttaaaacaagc
Run BLAST on NCBI

protein sequence of TCONS_00056157-protein

>TCONS_00056157-protein ID=TCONS_00056157-protein|Name=TCONS_00056157-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MNPDSDSIKWVITKDDYSTASILNEIQKLPEPKYSAFGERIRHVAPTAMQ
CSMFCGGKQCKYCNPARFKKEPNQDAINGLYSAWVTSNILATSRPSTTAI
KQYNIIEQFQKKEIRSIINLQHPGEHAACGFGLEAGGFTYVPQDFMDNDV
FFYNFGWNDYGVRSLQSILDMVKVFDFALSKGKAAVHCHAGLGRTGVLIA
CYLIYSMRLTSHEAIMKVREAR
Run BLAST on NCBI

transcript from alignment at scaffold_268:180840..198766+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056157 ID=TCONS_00056157|Name=TCONS_00056157|organism=Clytia hemisphaerica|type=transcript|length=17927bp|location=Sequence derived from alignment at scaffold_268:180840..198766+ (Clytia hemisphaerica)
TCAAGCTCCAATCAATATTTTGATGGTGAGTGCTTCTTTTAAGCTTGAAT
AGATTAATTGTTGGATAAAAAAGATCTGTACTATCCAATACAGATTCTAT
GCAAAACTACAATGGCCGCCGGCCCAGAACGACCACCCACGgcttggccc
gaacatgttcgggcctcttgattaattAGGATACTAAAAACCAAAATACC
TGTATTTTTCACCCAACTTGAGACATCCGCGCCACCTTACCACTTCCAAG
ATGAAAATGGCTCTGAACAGCAGATTATCAAGGATGTTAATTTTCGAGGA
ACCCGCCAgagaaattacttgaaattttggtcagtgGTGCAAATCTTGAT
GAAGAAAAGGTTTGCATAGTTTTCCAAACGCGGATCGAAGCAGTAACCTC
AAAATTTCAGGTCAAAGTGTCTGCTCTCCTATTTAGGATACCTAGATCTC
CAAATTAGGATACAACTCCTGTAAGTAGGAGAGATTGCCGAcaggtatcc
taatttgcacttgttcCTGACTGCCCAAATGAGGTCATTTTTCCCAATTG
TTCCCAATTTAcgccaattttcaagcctttcccagccttttaaaggcttc
ggagCACCGATGGAGGGGGATTActttgagggagagcaaggcagagggta
tctGAAGGGGTCCCAAGGACTATGGGGGCTTTGgagggctgtagaggcct
caatttttcctggtgagaaaggggtgtagcaGCCTCAATTGAGGAagtca
tttttggcaatttttgccggcttttgacagCACTTAGAGGAATTTTGAAg
aacccccaacggtgcagacgtgtactctcacatcccccctgaccagtgag
caccgatcgGACCCCCGgcacaccggccgggacccccaggggccgtcggc
ggtggtacccaaaggaggtcattctttctaattttgaccaattttcaagc
ctttccaccTTTCCAAGCCCTTTAatttaaaggcttcggatgactgatgg
agggtgctggctttgagggaaagcaaggcagagggtatccaAAGCAGTGC
ACCAGCCAAAGGGGtccgaagggctgtggtaggctgtggggGGCTGTAGA
GGCCTCGATTGGTCCCGCCGGGgctggtacccaaaggaggtcatttttcc
caatttttgcTGGCTTTTGACGGCACTtagaggaactttgaaggacctcC
AAGCGATGCAGaggtgtaccctcacatccccctgaccagtgggcaccaat
CGGACCCCCGGAACCTCGGCcaggacccccaggggccgtccacggtagta
cccaaaggaggtcattttttattgtcaaactttttcaaacagagtttttt
gtcgaatttgtcgaacctTTCTTCTTGTTGTCAAACTTTATCGAACGGag
tttttgttgtatttgtcgaacatttctcgttgtcgaactttgtcgaactt
aatacgttttgtcgaacttaatcgaatactcactattttagcgacttttg
aaaataagtttgattaaagaatttaatcgaacttttgtcgttcgattaag
ttcaacaaagttcgattagttcggtaatcgaactgttCAATTAATTACAt
ctggcccagaaggctcacaaGACACTATGCGCACTTCCGAGTTTTTTTGT
gacgacactgcgcacttctaaaaatattttagagatAAAAAGTCCCCCTC
AAAAGATAGCCattctggtcagcaaaatagatacTGAGTTGTAATAAATG
AGTTGATGATAATAGCGAAATCATTTGTGGTTTTACGAGTTGTAAATCTG
GCCTGTGATTTATATATAACAACATTTTTACACTTGAGCGCTTAACTCAG
AAATTTTAACCTGCAACTCTTGATATGAACAACTTAGAAATATTAACTTG
TTTTGCGTAACTCGATGTTCATTTTAAAGaccaaaaaaatttcattgcgC
GGGCCCCGCTCGCTTGGAAATTTCCCGCCATGacaaaaaagtcagaagtg
cgcagcgtcacttgagccttctgggccattgaccctagacagttctagtt
cacaaattttataagaactggaagtgcgtgaaaactagaagtgcgtgctc
tgagccttctgggccattgaccctagacagttctagttcacaaattttat
aagaactggaagtgcgtgaaaactagaagtgcgtgctctgagccttctgg
gccattgtACAAAACACGCGCTTTTACCCAGACGGTGCTAATCGAACGTT
CAATTTTGATTGAAGGTGGATGCATGCAGGATGGTTGTCTGCTAAGAAGA
CTAGGTTGTCTTCTCACCCATAGTCATAGATCATCTTGGTaagttgttct
tcaaattagtttttgagGTTGGCtggttcaaattttttcatctatggctt
taaatttaggtaatttttcatagttttatcTATAGGCTAGGCAAAGGGAA
GTTTACGTATTAGTTTACCGTTACAATGAATTCATAATTTGAtgcggcaa
aatttcattattcattattcattattttaccATAAACTCTCCCACGCAAA
CAATCGAATATAAACAGCAGTAGAACGTCTTCATTTTGTACCGACGCGCG
CTCGTATTCTTTGACTTTGTTTCAAATTGGGCAGtcagtcacactagcgt
cccccaaaatgtgtatcaaagattaatgctgcgaaacgcgatatcgttta
cttgactctcaagcaaaaaaatgcgccgcaaaacttctaaaggaattcat
gaaaaaataacccggcacttttaaatgaaattaatgttctcaaaaactat
gagaaattgcctaaaatttgagccatagatgaaataatttgagccaagcc
ttaaccttgagaactaatttgaagatcaacttcccaagaaaaagatctac
ggaggagacggaacccacctagatccgcgcactgtcggataggctatttc
ccggaaattttgccggacctcaaactctgacccatttacatgtgcggaat
tgtttttactttagcgtataaactaggccttaaaaatcgaagcactgtct
cgggaattgaatgacaaattttggttggttgattttggctgctgcacgtt
ttattttgtttcaaactttcaagttttaattaattgtcttgcgaacttga
ttcaggtaactctcatccttgctgttgcaaatacatcctgtagatgactg
atgttgttttttctgaaagctagatttcctagtgtgactaactgttggGC
GCGCAAGTGGCAATGATACATTGTATCCTTTGTTTCACATTGGGCGCGTG
AGTGGCAATAATACAATACAAAGCGTGTGGATGAAATCAGTTGTGTGAAG
GCTTTGGGAGATTCTTGCCGTTTAGAGTCATTGGTAAGTCATGTATTGAT
GTTTTTGatatttggactgaaaaaaatagaaataatgaaaatttttataa
aataatgaaaatttttatgcgGTAGCTCAAACACACGCGGGCGGGTAACG
GTAAACTAATACCTGACTTCCCTTCGCCATAGTGTTAAAGCGccagttta
ttttttcatacactttagaagttttgcggcgccaTTTTTTGCTCACAAGT
CAAGTAATTATTAAAGCGCTTCCGCAACATTAATCTTTGATTTGCAATTC
GGTAGGGCGCGATCGTAATGGGCCATTGACAAAAGAAAATCCTTTTTCTT
AAACAGActctgaccccctccccccttcctcttaatggccaaaaaattct
tgaaaaaaataaacttttaaaggCCTGAAATTACTTTTCTCCTATATGTT
CTTTTgcattctttttctttgttaacATTGAAATGCTTctttatttccac
gggaaaatATGTGGTTTTGAGCTGTAACCTTAGGATCTCACCCGAGGCGA
GTCAGGGCGGAATAGGAATCGCGGCTGTTACCATGAGGGAGGGGGAGTGT
ATTGCTGAATTGGGTCATGTGACGAATTATATTTCTGGATATACGATTGA
AAAGTATGGTGGAAGTGATGGATTGTATGGTTTCTTAGTATTTTTTAAGA
CTTTGAGACACTGCAAGGAGCTTATTGTAAGTGagattttccttcttttt
tgactaattttgacGGCATAAACgttgaccccctccccccccttaCGGCC
TGAAGCTGTTAAAAAAAGGATTGTCTATTGCCGACGGCCCCTAAATTGAA
TTCTCACTTGACTAAGAATTATGGTGTTTTCCTCAaccattttcgatttg
tttGATAATTTCGATTACTTTCCGATCATATTGAATGGTGGAATCTGAAA
CCAATGAAAACAGGGATTATTTGTCAATTTGTTGTGTCAACTTAACAGCA
TTGTATTGATACAAAGGCAAAGATGAAAGGGGTAAGATTAACCTAGTTTT
TAATtctgatataggagtttttaAAGACGTAAATATTTAGACTGTCTGGT
TTTACCAAAGACCTGATCATAaatcaaaatgataaatttGTTGGGTGTCT
GGAAGAGAAGAGTGTGTGAAGGAGAGCAGAATTCTGTTGAgctttttaaa
tattggaatagcCATTTGGGAAGGCCCACCAGATTTTTTGAATAACTACC
GTGAAATCAGGTAACttcatcagtggagggaaacttgcatagccatcaaa
tgcctaaccaatcaaagcagcaaaatttcaaaacaaatgtaaCAGTGCaa
gaactacgcagctccatCATTTTTCCGCccaagtttttttttgacaaatt
actCACTGACAGAATTGCAGGTAAATAAAACAGTGTTGTTGCAGGTTGTt
ggataataaaaaatcatgcaaaatcacaaattttaagATAGCGGGAATTC
AAATGTTTCTTTGTGACTGCTGAACGTGTAATCTCAAATTCAAACATATT
TAGGTATGGCATGCTTCACTTATGATTAggagatatatatatatatagtc
aagaagtataaaaccttcaactacttaaaatggaaacaataaagacaaaa
ctcacaaaacaaaaagacaatataaatacaacaaaaatctagaatgaaca
ttcacagaaaatcaatcaggttggaattgaaaaggaaaaaatgatGACAT
AGACATCCATCAGtgcaaaactagtgatctaaagtgACTACAAGGAACAA
Agcgactcaatatgagttaagatggaaagaagtaactcaatatgagtcaa
aaaatatttcaagaaaacacattatctgttcctcagttttcgacctacaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg
tgaaaatatcctcctatatgatggaaatagggttgtgtaggtaggccaag
cagtgttaattagacaccaccacagataaaaagatgtaaaaagatgtgtt
taaTGAAAGTATGAAACGCGCTCAAATAGAAAATAAACTAAGACTTAAAA
Tccacggaaccagccgaagaaactaaaataacaatgaaaaaagaagtgta
ctttctactagacaaagttgccacacctttgacacgtttctgccacaacg
ttgtagaaagcatactagatgggaaggaactgggattggatcgccactat
ccaaccctggggctctcacacacattttacagttcaaagaagaagatgga
aagagtgggaaaagaatgggaattaaaaaaaaaaaagtcggACTAGAACC
CGGTTCAAAGCCCTGTACACccgtgaccgctcaccgcaaAAGCTGGCGAA
CGACTGAATTTTGAGaaagttgaaatcttgaaaattctgaaatatNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATCCCGTCGTTGATGGAA
ATATCtaggtttaaaaaagaagcatgaGATCCAGAATGTTCAATTTTGAG
TTCAAGTTCATCTGGATAGATTTCTCCATACACATATTANTTGGGGGTGG
TGCCgaacactaaaactagcacttttggtgtagtaagtgcttatatttta
attctttttaaagaactttcaaaatttttcacaaaaatttttttatgaaa
aaattctttgttaaaaaaaatatttttgttagatggacgaaaaaaaaNTC
TTTGTTGAATGAAAATGGCGAGCTTTAACCTTATCTTCCTCGATGAGCTT
GCTCATGTACCGTTGTTCATATTGGTAGAGGAAGAGATTATCCCAAAACG
GTGCTGGATCAATTCTCATGGGAATTCCTATCACCTGACACATAATAATG
TCACCTGccttgaaaaaacaatttttaataagATGCTTCATAGCTGTCTT
CAACGAATTTTGAGTAAAGGACACAAAAGATTTGGGACCAGTATGCTTTA
TCATTTTTCGAAATAGCGATGTATTTGCAATTGCCagcatcaaaaacaaa
atcaatgacTTCTGAAAGTTCTTTAATCAGCTTGTCAAGAGGAATCTTTG
TACAATGTACTAAAATCAAAGGTTGAAATTGATTTAGCATTCTTCTTTNt
gtttttgatgatatcactcaaaaacaggggtggtacctggaaatcttttc
tgaaaacagttactaccaaggtgtagtaactgcaaagggtggtggtcctt
gaaaaaagtgttgaaaaagcacttactacacatcatgtcttgtagtaact
gcgtgccctcCCCCCCTGGGAAGATCCAAGTCCTTCTCAGAAACAGCAAG
ACGAAGGCGTTTAgaaaaaccaacattttcaTTTACAATTTCTGCCTTAC
CTCGATCAATCCTAACGTATGTTTCATTTCCTGTACCCAATATCCCAATC
TCCTTCAAAATCACTTCAATATAAAAACGTTTACGAATAAATGCAACGTT
ATTAGCAGCTTTATCAATGGgaacaataacaaaatttgtGTGAAGTTCAT
TTAAATAGTCAATGACATCTTTTCTCTTGAGCACTGAGcttacttttttg
tacttgGTCTTCTTTTTCAGGGATATATATATATCATCCTGAgcatgttg
tgttgttgtgtcctcttgttggtattgttttgtctctttttgtctattac
attttttgaatagttgaaggttcaatacttctttgactatatataaataa
tatatatttgtatcttaatgaccagccaggtctttacTTTCTTTGCATGT
TACTTGGCCTCCACTGATACTCAATCTCACCATAATTACTCCAGCAGAAA
TCTTTTTAGTGATAACGTCATCTTATTCTTTTATCGTATACAACACAAGA
TGATTTATCCTGTTTGCAGTGTTTGTACTAACTTAatgcagggatatgtt
atagcggagctggataacgcacatttaaaaaagacttgttctatctctgt
tcctgacattaaaatttgatatgaaatttaacttttttaattacaaactc
gtgaaatttggatttcctcttagccaatgattctgctgctgcatttatcg
ttcacgattaaaagcttttaattatcaagagggtctgtaaaacattggta
aatgacaatttaaaaaaatgaaaaacattgttttcattagtaaagttata
agaagtttcttctctaagattataaatagtactttttaatttgaaatacc
gcgctacaccgcggggtgcctcactttctaactgatattttcagatagca
agtcggtctGATTATGGAAGAAATTTCAAGACAATTGAAAcgatatttgt
caaaatatttacatcaAAAATTTTTAAAGAGAAATCATGAAAGCTTCTCA
aattcataacacacgctgataaaaatagatttcatttacaaggaagcttt
tggggtatcttctacaaatattattttgatgaaaagcgggaacatcatag
caaaatatgtgcaaacgtactgcatgaatactttgtctgcttcatttttc
ttataaaaacgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNatttctattatcaacagtttacaatagaaaagacaaa
gaagcaatccgctaaggaattctcgtccttcatccagctccgctataaca
tatccctgcttAATGCATGTAGAGACGCGTCGCATTGTCATAAGTTAATA
TACGTTATGGCACTATTATATGCAAGGTCTCATTTTCACCAAAAATAGTA
ttgctctccatcgcagtgttcAAGCTGTAAAAATCACAGACTGAGGTATT
AGGGACTCACAATATAGCACCGAAGTGAACAAATTGGCCTTTCGTGGATG
AAAGCAGACTCCTGTTGaacttttgaatattgaaacaCATTTAGCACTGT
AACAAGTTCtcatttttaccaaaaataatTGCTCACCATAGTGTTCGAGC
TGTAGTCTCATTCTGTCGAATTAGGGATTCACAATATTGTCACTgagtga
acaactcggcctTGTGTGGCTACTGGAATAGTAAAGTTTGTATTTTCGGT
TTCAATCAGTTAACACACCTAATGTAATGAATTGTCAGGCTTAAGGCTAC
AAAAGAAAATCTCCTTACAAAGTGAACATTTAAGAGGCCTTTAAAGGAAA
TTTTCAAGATATTCTAATTTTAGTTGCAATTAAAACACTTTATAAATTCA
GTCTTTTTTCAATAAGAATTCAATAGATTGATTTTTGACGGttttgagca
ttttcagaaattgatttttttattcattttagtATGACCTTTGATATTGT
GGAACAAactcaataaatgacccatcaaaatctaatttttctttctcaat
TGATCATAAAGACACATGGGAACAGTAATATCTTGTGTGATATCATGTTT
TTTTGTTATGGGgctctattttgtttttcaaacaaaaacgcCAGAAATAT
GCCAGTTTAACTTCTAATTTGCCTAATATATGGAGGGGTTTAGACAAGAT
GGATTGGAGACTTTCTGTCTAAGTTTTGGCCTCAAATATTGGCTAACCTC
TCATAAGTATAAGTTTTGAGGTAAAATTGTTCCCACCTATACAATCATAT
TTTCTAGTTATAAGGGCTGTCTGCAACCATAACTGTAGGGTGGGAGGGTG
TTAAATAAGATTCACATTCAGCTTCAAATCTCTCGCCAACTTGATCAACA
GATCTTTCAATCCACTTCAACATTATGAATATAATATAAACCCAAAGCAA
TGACATTTAGACAAAAAGGGTGGTAGGCGGCCACACATTCGCCAGGCCTT
GACACTAAGTTGGTTATTAGCTAATTTACTGGTAAACTATAATTTAACGG
GTTAAGACTAAAAACCATTTTTTGGTATCTTCTAAAGATTTTATTATAAG
TGAAAAATTATTCTAAGCGGGAAATACCAGATAGATACCAGAAATTGGCT
ATTTTCTTGGTTTTAGTTTAACACTGAAATTTTTCCTCTTGTATCTTTGT
TTATTGCCTGGTAAACATTTATGAATATTAATTATTTAATGTTATAATGA
ATTAGTTTTTGTTGCAGGAAATATCTAGTAATGCCCAAAGTACAAGATTT
ACAGTAGCATGGCTTTATTTTCATTACATAAACAGCTGATTAAACAGCTG
gcaactttgttttgatttattttctttcacgtttttgccaaaagctAGAA
TCTTTTGCCAACTTTTTGCCCTATCCTATTTCTGAGGTAAATACTCAAAT
TTTAGTTTGTTGAATCTGATACCCTTCAGGACACACTGGTCTCACTGGAA
GGTTCATTGCATTATTTACCTTATTATTTATATAGTGTTTTTTTAAAAGA
CGAATTCAGAAAAACTTCTTCTGTTTTGAATTCTCACTAGTCTAGACATT
CAGCAGatttttcttcctttgaaaaatATCACAAGGAAAGAGAGAGAAAA
GTGTTACTTTATTGAAAACATTCTTTACTCATTTGCTTTAGATATTTTTT
CACACCTTATGAGGGACTTTGAAAGTCAGAAATTACATGTACCTCTGTAT
CCTTTGTGGGAAATAATTTAAATTGTGTGTGGTTTACTtgaatttgttta
atttttaaagagCACTCAAGAAAGAAAACGATGGATCAATGGCATAAATT
TCAACACAGATTTTACAGATTGTGAAACCTTGcttattttaaacatttta
tacAATATATACATGANTTCTAAGCGGGAAATACCAGATAGATACCAGAA
ATTGGCTATTTTCTTGGTTTTAGTTTAACACTGAAATTTTTCCTCTTGTA
TCTTTGTTTATTGCCTGGTAAACATTTATGAATATTAATTATTTAATGTT
ATAATGAATTAGTTTTTGTTGCAGGAAATATCTAGTAATGCCCAAAGTAC
AAGATTTACAGTAGCATGGCTTTATTTTCATTACATAAACAGCTGATTAA
ACAGCTGgcaactttgttttgatttattttctttcacgtttttgccaaaa
gctAGAATCTTTTGCCAACTTTTTGCCCTATCCTATTTCTGAGGTAAATA
CTCAAATTTTAGTTTGTTGAATCTGATACCCTTCAGGACACACTGGTCTC
ACTGGAAGGTTCATTGCATTATTTACCTTATTATTTATATAGTGTTTTTT
TAAAAGACGAATTCAGAAAAACTTCTTCTGTTTTGAATTCTCACTAGTCT
AGACATTCAGCAGatttttcttcctttgaaaaatATCACAAGGAAAGAGA
GAGAAAAGTGTTACTTTATTGAAAACATTCTTTACTCATTTGCTTTAGAT
ATTTTTTCACACCTTATGAGGGACTTTGAAAGTCAGAAATTACATGTACC
TCTGTATCCTTTGTGGGAAATAATTTAAATTGTGTGTGGTTTACTtgaat
ttgtttaatttttaaagagCACTCAAGAAAGAAAACGATGGATCAATGGC
ATACATTTTCAACACAGATTTTACAGATTGTGAAACCTTGcttattttaa
acattttatacAATATATACATggatattatttttcatttactcTTACTT
TTTGAAGCATTTTGTGAATTCTCTGATGGTGTCGACATGATTGATATTAA
AAAACTACTAAAATAATAGTTTTTCTATTTAGAATTATCTATCTAATTAC
TCTTACTTTTTGGTATATAGACTAAAGTgaaattctcatttttcttattt
ttcatcaTCTGGTTTCTATGGGTCaaagttttcaataaaattatgacctt
tCAAGAAATGATTTgtttcaaaaaagtatttcaagTATTGGAGAACATTT
TGTCAGATTTcacctaaatttatgcttttgGTTTTGAGGTGTAATTAGTT
TTTGAAACCGTTTTTGACTTGTAAATTCCTTCTTCAGATGTTCCAAATCA
TTTTAACTACTTTTAGCTACTTTCGAATAGTCGAGAAGTCGAGATGCTCA
AGGTTTTTGACTAATAAAAACTATGCATGATTTCAACATAAGAAAAAACG
CATTTATAGAGATTTGAAATTCATCACATTTTGACTTCCAGAAAATAGTT
TGGGAGTTTTACTCAAGACCATATTATGAAGATATTTCTGgctaaaaatc
tcaaatgatTTGATTATCCATTTGTTTAATTGATAAAAGAGAAATcataa
aagaagaagatttaATCATACTTAAGGATAAACTCAATATTGCACAGTCA
AGTTTTGTAACCCGTTATCCTTTACGTTAAACGTTTTAGCACTGGAAATT
AATTTTATCAAGTTCATTCCTTTTGTCTTGTCTTTAAACCAGCTCATTTT
CTCTGAATATTGATGACTCAggtaaaagattttttagaaaaaggaaTCTT
TTATTGAATGTAAGATAAAATTTGTTTGACTGTTTGACTTCTATGAGACG
TTCTAGCCGGTAGCAATTCATTTGAAATAAAACGAGTCTGTGCTTTGCTT
TTACTTAGAAAATTTATCATTATTCTGAAGAAATGTGTGAAAATTCCTTT
AGATATTTTTGAGATCATAAATATTGATTATACTTTAGTATAAAGAAGGG
GAAAAAATAAAGTCGAGAAATATTTCCTTTTATAACACCAtgaaaaattc
atgatttttttatggTTCACAAGTAACCATGGATTTTCTGAATTCTTGTA
TGTGAAAACATTGTCAGCCGAACGAACTATTTTGGTGTTCCTTCATCATT
AGTATTCTCTCTTCAAGACTTTCAAAAAAAGGAAATGTAGAtcattattt
tatattatttttactttttttaaatatttttttctacttCTAATCTTTGG
TACAGCTTGATAGAGGATCTTGATCTAAATGTTATGTCTTGATTCTTGTA
CaattgttacactttttctcttgttctatttttattgataagattTAAAA
CCCCATAATGACTTATGTGTCACttacttttgaatttaatggCATATCTT
TTATTGGTAATTAAAGAACCGTATTGGATGAAGATCTTTGTATTCTAAAT
ATTATTCTGGCGTGCAGAATCCCATGAGTCCTTTGCTTTACTTTTTGTTT
ATCAACATCATTTTTAGGTGCATATAATTTTTCGAATGTTATCTTTCCTG
CTCCAAATATGATTATGCTCAAAAGGGGAGATTGAGAGATTGGTAACTCT
AGTGTTTACGGTCGAATTCTGTCtgtcttttcttattttctagGAAGTCG
AATGTCTTTAATCAGGTTTTAGTCAGAGATGGATGGCTTCAAATACTGAT
GAATTACAAAGCAGTGtactttttcttctttagtCTCCTtcgtttatttg
aaaaaattgaactacGATCACAAAATGAAAGGTAGGCTCAGCAAACGGTC
ATGTTCTTACTTCGAGTTATAAAAAGTTGgtttcaaaaaatgctgatttc
ttCATGCGTTGACTCCACATGTTTTGTGGTCAAAATGCTCTAGGGAGCTC
ACTATTCTTCTTAGAGAAAGGGggaattcaaagaaaaatgcAGTTTTTAG
ATAAGAAATGCAGGTGATTTCTActtcttgaaaatttcttttcttctccC
CTGGTTTTATGgtcataaattttattttctatgaagAAAGTGTTTTTTAG
AGCTAGAGAAGTTGTCGAGGTGGTAGATATTTTTAGTACAATTAGAGAAA
TCTTGCCATTAGATAAGAAGCTTAGGTTTTCATTCGAACATTTTAAGGGA
AATATGTCTTTCCTGTGGACATTCAAATAAAACTTCAGTGTTTGGAGATG
CCACGTTTTTTTTCGGTTAGTTGGAGTAAATGGTAacgtttttggatttt
ttaaagGGAAATTTTCTTATAAGTTTGTTAATACCGCAGGCGTAAGTTTT
GCTCAAGAATGTCCGAATAACCTAAAGTGcaagtaaaatttcaaattaaa
aatattccCCAGTTGACAGCCACACCactaaaataatatataataataaa
tGAATGCGTGGTATCTAGAGGCTCAAAATCCTTTATTGAACATTGAAAAT
TACCATATCTCTCTTTTAGTgtttaaatgataaaaaataatacAGAATCT
AAGAATGGATATCAAATAAGAACCGTACAATTGGTTAAGAAGAGATTGGT
TCGAACAATGTGGGGGGATTCTCGTGGTATCAAATAGTTTCCGATTCTTC
CGACGCAACCCGGGAATGAATCCCGATTCTGACAGCATAAAATGGGTAAG
TATATGGAATTTTTATACAGGGTCCAAAAAACTTGGTCTGTTTTCTTGCA
TATCTAGTGAACCTGCCCTTTGTTATCCAGGAGTTTATTTATATCGGAAA
CAGCATCAAGTCATACCTTCAGTATTTTGTCACTGCTTTTAGAGAAATCT
ACAAAAGACAATCGAGTCCCTTATAGGTTTTCGTGGAGTTTAGATGCATC
TGCAACATTAGTTCTCATTGAAACCATCCAAAGTAAGTGAACTAACCGAA
GGATTATCTTTCTTACCAAAGGTCATAACCAAAGATGATTACAGCACAGC
AAGTATCCTCAATGAAATCCAAAAACTACCCGAACCCAAATATTCGGCAT
TTGGCGAACGTATCCGCCATGTTGCGCCCACCGCCATGCAATGCTCCATG
TTTTGTGGTGGCAAACAATGTAAATATTGTAACCCTGCCAGGTTCAAGAA
AGAACCCAATCAAGATGCTATAAATGGGCTATACTCTGCTTGGTAAGGGT
TTATCTCatgtttttatctacaacaaagTGGTTTATTGGGCTTAATTCCA
GTAAAAAAGTTAACCAAACCCCCCTTCCATTTATTCTTAAACGTCAAACA
ATCCCCcttagattttgcaattttctttGCAAACTTTTCAGGTACTTCCA
tggttttttattttactctGAAAGACCTCCCTTGAGACTTTATTGTCTTT
TGAGAGACCTCCCTTGATTCTCCAGGTTTGAAGGGGGGGGGCTGAGTGAA
AGATATAATAATCTTATCATATGACCTCCTCGGCACGGGGTACTTTTTAT
TGCTCAGTTCCTTATATATATTGTTATTGCATTCTCAATAGTAGGGTTGA
CAAAAAAGGGTCGTCCTAATTAATTTTTACCTATTAGGAATCTTTCTTGT
AATAATTAGAGATAAGGTAatattagttacacggtcttctcgaggtggga
tacgggatatacagggtcagtaaaaaccgtattAGTGGCGAGGCTTGCCG
AGTTANAGGGTCGTCCTTATTAATTTTTACCTTTTAGGAATCATTCTTGT
AATAATTAGAAATAAGGTAAtctgttatatttttctttacaacTTACTGT
TTGTATTTTACAGggtgacgtcaaatattttggCCACTTCCCGACCTTCC
ACCACTGCTATAAAACAATACAACATCATCGAACagtttcaaaagtaagc
cctggCTGCAATTCTATCTTTTTGAAGTATTCTTGTATTTTTCATAACGT
CTCGTAACAAATTTCTGCGAAAATTTTAGCACATTTTAATCCAACTTTAC
CTACGTTTTCTTGAGAGTTCAAGGATTATGTTTTGGACTATTTTTGTTTC
TGGGAACACCTGCATGGATTAGTAATGGTCATTAATAGTGTTGTTCTATT
CGAATATGACGTTGTCGTGCAATAATTTCATGTGTGTAtgttttttacat
tttcgttagtaaaacatatttttacctcaaaatttactTCGAGAAACTAT
ATACTTCTCCCTTCATTTTGCAACAGGAAGGAAATTCGTTCCATCATCAA
CTTACAACATCCAGGCGAACATGCAGCCTGTGGTTTTGGATTGGAGGCTG
GTGGATTCACCTACGTCCCTCAAGACTTCATGGATAATGATGGTGAGTAT
TTTTTTAGTTGAATAAACACACACAAAAACGCTATAATAACAAACCTTTG
cttatatttgagtattaatTTTATGATTCCCTTTACTTGCCGATACAAGG
GGAAGTCAATGGGCAGAACTGCAATTGGTATTATAGTTAATGATCAAAGT
GGATTGTTTTTTTCGACAacttatttttataattaatcgcacgatgggtt
atttttttcttatttggcacgccctcaacgAGAGCAAttttaatcgttaa
ttgcatcctgtagagagcaattaatccttaatcacactcttcaatgccgc
gccaatttttacaaaattgattttaatgttttttcttacattttttgcat
cgaacgttttaattgcattcgaaattaattttgtgagaaataaaatctat
aaacaacaataaaagaaagacacagagagaaaagaaaaatataaaactct
cagtgtaatttctgttatttactttcctaactgggaaaaagtagtgaaag
ccattgtgcgattagctcgtaatcacataatcactcgtacaattcgaaaa
ttgcacttgtgaattttttgtttcgaattttcctcgtcctttcggactcg
gaaaattaataacaaaaaaatcactcgtgcaattatattcgaattgcact
cgttatcatgcgATTACATATATTTTGGCTTCGGTTGATGTTatagttga
ctctctctctaattcgacgaaatgattcgatacgctccattattcgatag
tATTGAAAGACACTGTCGACGAGAAACGCTTATAAACAATGCtccactat
tcgatacgctcccttattcgatgaaaatccgattccccttgaaaatcgaa
ttagagagcgtcaatcaACCGATCACATAGTTCGATTTACTGACCCTGTC
TGGTTCTTTTGTACTCATGTCAATTTCTTACgccattttataatttttta
tttttttatttttagtatttttctaCAATTTTGGATGGTAAGTCAATTCA
ATCCTTCACTTTCgcagaaaatgttttctccATTATTTAGCGTCAGAAAC
TAAATACTTCATCAATTTATTATCTGGAATACTTCACCAGTGAAGCAAAA
AGCCATTAGATAATGTaacctaataaaaaaaacgtgacAAATTTCTATAT
TGTCTACTTCTGTACTTTTTACTTTTATATTTCAACCGaggttttattta
aaaagttacATATTTAATCAACAGGAACGACTATGGCGTCCGATCTTTGC
AGTCTATTTTGGATATGGTCAAAGTATTCGACTTCGCGTTATCCAAGGGG
AAAGTATGTATTAAATATAGCTCAGGCCTTACATATCACAGGTTCCCTTC
CTTCTGCTTTTAAACAATTGGTGACATCCTATATACACATTTCATGGATC
CTGATGTTTGGCTTTAAAAGTTATCCGATCAAACTCTGTTGAACTGTCCG
AAACGTTAACGATATTTCAAGCCATTTCTTCTATCTGCAATCGGCCCAGT
TTTAAAACGAGAACTCCAGTATTACTATAATCTTTTCCTATCTTTATTCA
TCCTTGTAGGCGGCTGTTCACTGTCATGCTGGacttgggcggacgggcgt
tctCATAGCATGCTACTTGATTTATTCCATGAGACTAACCTCGCATGAAG
CCATTATGAAAGTGAGAGAAGCACGGTAAGCTTGGTCGTTCAAAGCCAAT
ACTTGGAAAGAAATTCGACACTATTCTGAGATCCGATTGATTAGTGATTT
GAAttgaaataaaccagccgaggctggaaggtcagccaatagagcttagc
tagatagctttaataagtgcgttaacagatgtaagagatgtactgaaaca
gagtagactaaaaatgttgaataatgtacaaaatgtgaaacatttgataa
cttgatttaaaattatttaaaacaagc

Coding sequence (CDS) from alignment at scaffold_268:180840..198766+

>TCONS_00056157 ID=TCONS_00056157|Name=TCONS_00056157|organism=Clytia hemisphaerica|type=CDS|length=4683bp|location=Sequence derived from alignment at scaffold_268:180840..198766+ (Clytia hemisphaerica)
ATGAATCCCGATTCTGACAGCATAAAATGGGTCATAACCAAAGATGATTA
CAGCACAGCAAGTATCCTCAATGAAATCCAAAAACTACCCGAACCCAAAT
ATTCGGCATTTGGCGAACGTATCCGCCATGTTGCGCCCACCGCCATGCAA
TGCTCCATGTTTTGTGGTGGCAAACAATGTAAATATTGTAACCCTGCCAG
GTTCAAGAAAGAACCCAATCAAGATGCTATAAATGGGCTATACTCTGCTT
GggtgacgtcaaatattttggCCACTTCCCGACCTTCCACCACTGCTATA
AAACAATACAACATCATCGAACagtttcaaaaGAAGGAAATTCGTTCCAT
CATCAACTTACAACATCCAGGCGAACATGCAGCCTGTGGTTTTGGATTGG
AGGCTGGTGGATTCACCTACGTCCCTCAAGACTTCATGGATAATGATGta
tttttctaCAATTTTGGATGGAACGACTATGGCGTCCGATCTTTGCAGTC
TATTTTGGATATGGTCAAAGTATTCGACTTCGCGTTATCCAAGGGGAAAG
CGGCTGTTCACTGTCATGCTGGacttgggcggacgggcgttctCATAGCA
TGCTACTTGATTTATTCCATGAGACTAACCTCGCATGAAGCCATTATGAA
AGTGAGAGAAGCACGGTAAATGAATCCCGATTCTGACAGCATAAAATGGG
TCATAACCAAAGATGATTACAGCACAGCAAGTATCCTCAATGAAATCCAA
AAACTACCCGAACCCAAATATTCGGCATTTGGCGAACGTATCCGCCATGT
TGCGCCCACCGCCATGCAATGCTCCATGTTTTGTGGTGGCAAACAATGTA
AATATTGTAACCCTGCCAGGTTCAAGAAAGAACCCAATCAAGATGCTATA
AATGGGCTATACTCTGCTTGggtgacgtcaaatattttggCCACTTCCCG
ACCTTCCACCACTGCTATAAAACAATACAACATCATCGAACagtttcaaa
aGAAGGAAATTCGTTCCATCATCAACTTACAACATCCAGGCGAACATGCA
GCCTGTGGTTTTGGATTGGAGGCTGGTGGATTCACCTACGTCCCTCAAGA
CTTCATGGATAATGATGtatttttctaCAATTTTGGATGGAACGACTATG
GCGTCCGATCTTTGCAGTCTATTTTGGATATGGTCAAAGTATTCGACTTC
GCGTTATCCAAGGGGAAAGCGGCTGTTCACTGTCATGCTGGacttgggcg
gacgggcgttctCATAGCATGCTACTTGATTTATTCCATGAGACTAACCT
CGCATGAAGCCATTATGAAAGTGAGAGAAGCACGGTAAATGAATCCCGAT
TCTGACAGCATAAAATGGGTCATAACCAAAGATGATTACAGCACAGCAAG
TATCCTCAATGAAATCCAAAAACTACCCGAACCCAAATATTCGGCATTTG
GCGAACGTATCCGCCATGTTGCGCCCACCGCCATGCAATGCTCCATGTTT
TGTGGTGGCAAACAATGTAAATATTGTAACCCTGCCAGGTTCAAGAAAGA
ACCCAATCAAGATGCTATAAATGGGCTATACTCTGCTTGggtgacgtcaa
atattttggCCACTTCCCGACCTTCCACCACTGCTATAAAACAATACAAC
ATCATCGAACagtttcaaaaGAAGGAAATTCGTTCCATCATCAACTTACA
ACATCCAGGCGAACATGCAGCCTGTGGTTTTGGATTGGAGGCTGGTGGAT
TCACCTACGTCCCTCAAGACTTCATGGATAATGATGtatttttctaCAAT
TTTGGATGGAACGACTATGGCGTCCGATCTTTGCAGTCTATTTTGGATAT
GGTCAAAGTATTCGACTTCGCGTTATCCAAGGGGAAAGCGGCTGTTCACT
GTCATGCTGGacttgggcggacgggcgttctCATAGCATGCTACTTGATT
TATTCCATGAGACTAACCTCGCATGAAGCCATTATGAAAGTGAGAGAAGC
ACGGTAAATGAATCCCGATTCTGACAGCATAAAATGGGTCATAACCAAAG
ATGATTACAGCACAGCAAGTATCCTCAATGAAATCCAAAAACTACCCGAA
CCCAAATATTCGGCATTTGGCGAACGTATCCGCCATGTTGCGCCCACCGC
CATGCAATGCTCCATGTTTTGTGGTGGCAAACAATGTAAATATTGTAACC
CTGCCAGGTTCAAGAAAGAACCCAATCAAGATGCTATAAATGGGCTATAC
TCTGCTTGggtgacgtcaaatattttggCCACTTCCCGACCTTCCACCAC
TGCTATAAAACAATACAACATCATCGAACagtttcaaaaGAAGGAAATTC
GTTCCATCATCAACTTACAACATCCAGGCGAACATGCAGCCTGTGGTTTT
GGATTGGAGGCTGGTGGATTCACCTACGTCCCTCAAGACTTCATGGATAA
TGATGtatttttctaCAATTTTGGATGGAACGACTATGGCGTCCGATCTT
TGCAGTCTATTTTGGATATGGTCAAAGTATTCGACTTCGCGTTATCCAAG
GGGAAAGCGGCTGTTCACTGTCATGCTGGacttgggcggacgggcgttct
CATAGCATGCTACTTGATTTATTCCATGAGACTAACCTCGCATGAAGCCA
TTATGAAAGTGAGAGAAGCACGGTAAATGAATCCCGATTCTGACAGCATA
AAATGGGTCATAACCAAAGATGATTACAGCACAGCAAGTATCCTCAATGA
AATCCAAAAACTACCCGAACCCAAATATTCGGCATTTGGCGAACGTATCC
GCCATGTTGCGCCCACCGCCATGCAATGCTCCATGTTTTGTGGTGGCAAA
CAATGTAAATATTGTAACCCTGCCAGGTTCAAGAAAGAACCCAATCAAGA
TGCTATAAATGGGCTATACTCTGCTTGggtgacgtcaaatattttggCCA
CTTCCCGACCTTCCACCACTGCTATAAAACAATACAACATCATCGAACag
tttcaaaaGAAGGAAATTCGTTCCATCATCAACTTACAACATCCAGGCGA
ACATGCAGCCTGTGGTTTTGGATTGGAGGCTGGTGGATTCACCTACGTCC
CTCAAGACTTCATGGATAATGATGtatttttctaCAATTTTGGATGGAAC
GACTATGGCGTCCGATCTTTGCAGTCTATTTTGGATATGGTCAAAGTATT
CGACTTCGCGTTATCCAAGGGGAAAGCGGCTGTTCACTGTCATGCTGGac
ttgggcggacgggcgttctCATAGCATGCTACTTGATTTATTCCATGAGA
CTAACCTCGCATGAAGCCATTATGAAAGTGAGAGAAGCACGGTAAATGAA
TCCCGATTCTGACAGCATAAAATGGGTCATAACCAAAGATGATTACAGCA
CAGCAAGTATCCTCAATGAAATCCAAAAACTACCCGAACCCAAATATTCG
GCATTTGGCGAACGTATCCGCCATGTTGCGCCCACCGCCATGCAATGCTC
CATGTTTTGTGGTGGCAAACAATGTAAATATTGTAACCCTGCCAGGTTCA
AGAAAGAACCCAATCAAGATGCTATAAATGGGCTATACTCTGCTTGggtg
acgtcaaatattttggCCACTTCCCGACCTTCCACCACTGCTATAAAACA
ATACAACATCATCGAACagtttcaaaaGAAGGAAATTCGTTCCATCATCA
ACTTACAACATCCAGGCGAACATGCAGCCTGTGGTTTTGGATTGGAGGCT
GGTGGATTCACCTACGTCCCTCAAGACTTCATGGATAATGATGtattttt
ctaCAATTTTGGATGGAACGACTATGGCGTCCGATCTTTGCAGTCTATTT
TGGATATGGTCAAAGTATTCGACTTCGCGTTATCCAAGGGGAAAGCGGCT
GTTCACTGTCATGCTGGacttgggcggacgggcgttctCATAGCATGCTA
CTTGATTTATTCCATGAGACTAACCTCGCATGAAGCCATTATGAAAGTGA
GAGAAGCACGGTAAATGAATCCCGATTCTGACAGCATAAAATGGGTCATA
ACCAAAGATGATTACAGCACAGCAAGTATCCTCAATGAAATCCAAAAACT
ACCCGAACCCAAATATTCGGCATTTGGCGAACGTATCCGCCATGTTGCGC
CCACCGCCATGCAATGCTCCATGTTTTGTGGTGGCAAACAATGTAAATAT
TGTAACCCTGCCAGGTTCAAGAAAGAACCCAATCAAGATGCTATAAATGG
GCTATACTCTGCTTGggtgacgtcaaatattttggCCACTTCCCGACCTT
CCACCACTGCTATAAAACAATACAACATCATCGAACagtttcaaaaGAAG
GAAATTCGTTCCATCATCAACTTACAACATCCAGGCGAACATGCAGCCTG
TGGTTTTGGATTGGAGGCTGGTGGATTCACCTACGTCCCTCAAGACTTCA
TGGATAATGATGtatttttctaCAATTTTGGATGGAACGACTATGGCGTC
CGATCTTTGCAGTCTATTTTGGATATGGTCAAAGTATTCGACTTCGCGTT
ATCCAAGGGGAAAGCGGCTGTTCACTGTCATGCTGGacttgggcggacgg
gcgttctCATAGCATGCTACTTGATTTATTCCATGAGACTAACCTCGCAT
GAAGCCATTATGAAAGTGAGAGAAGCACGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035355XLOC_035355Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056157-proteinTCONS_00056157-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056157-exon-scaffold_268-1491911889:180840..180864TCONS_00056157-exon-scaffold_268-1491911889:180840..180864Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:180840..180864TCONS_00056157-exon-scaffold_268-1510915933:180840..180864Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:180840..180864TCONS_00056157-exon-scaffold_268-1575043694:180840..180864Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:183105..183177TCONS_00056157-exon-scaffold_268-1491911889:183105..183177Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:183105..183177TCONS_00056157-exon-scaffold_268-1510915933:183105..183177Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:183105..183177TCONS_00056157-exon-scaffold_268-1575043694:183105..183177Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:195009..195184TCONS_00056157-exon-scaffold_268-1491911889:195009..195184Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:195009..195184TCONS_00056157-exon-scaffold_268-1510915933:195009..195184Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:195009..195184TCONS_00056157-exon-scaffold_268-1575043694:195009..195184Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:195461..195681TCONS_00056157-exon-scaffold_268-1491911889:195461..195681Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:195461..195681TCONS_00056157-exon-scaffold_268-1510915933:195461..195681Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:195461..195681TCONS_00056157-exon-scaffold_268-1575043694:195461..195681Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:196303..196383TCONS_00056157-exon-scaffold_268-1491911889:196303..196383Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:196303..196383TCONS_00056157-exon-scaffold_268-1510915933:196303..196383Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:196303..196383TCONS_00056157-exon-scaffold_268-1575043694:196303..196383Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:196716..196831TCONS_00056157-exon-scaffold_268-1491911889:196716..196831Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:196716..196831TCONS_00056157-exon-scaffold_268-1510915933:196716..196831Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:196716..196831TCONS_00056157-exon-scaffold_268-1575043694:196716..196831Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:197805..197826TCONS_00056157-exon-scaffold_268-1491911889:197805..197826Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:197805..197826TCONS_00056157-exon-scaffold_268-1510915933:197805..197826Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:197805..197826TCONS_00056157-exon-scaffold_268-1575043694:197805..197826Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:198064..198142TCONS_00056157-exon-scaffold_268-1491911889:198064..198142Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:198064..198142TCONS_00056157-exon-scaffold_268-1510915933:198064..198142Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:198064..198142TCONS_00056157-exon-scaffold_268-1575043694:198064..198142Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1491911889:198399..198766TCONS_00056157-exon-scaffold_268-1491911889:198399..198766Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1510915933:198399..198766TCONS_00056157-exon-scaffold_268-1510915933:198399..198766Clytia hemisphaericaexon
TCONS_00056157-exon-scaffold_268-1575043694:198399..198766TCONS_00056157-exon-scaffold_268-1575043694:198399..198766Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:180840..198766 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.633531	0.617793	0.717316	0	12.8153	7.17211	8.14504	15.2506	4.18032	4.5045	3.7215	5.90699	1.62837	3.06297	0	0	0	0.487464	2.69383	2.11417	0	0.896318	0	0.660398	13.604	9.10586	1.73739	0.927097	0	0.716419
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR000340Dual-sp_phosphatase_cat-dom
IPR016130Tyr_Pase_AS
IPR000387TYR_PHOSPHATASE_dom
Vocabulary: Biological Process
TermDefinition
GO:0016311dephosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0008138protein tyrosine/serine/threonine phosphatase activity
GO:0004725protein tyrosine phosphatase activity
GO:0016791phosphatase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
molecular_function GO:0016791 phosphatase activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
Blast
[Close]
BLAST of TCONS_00056157 vs. Swiss-Prot (Human)
Match: PTPC1 (Protein tyrosine phosphatase domain-containing protein 1 OS=Homo sapiens GN=PTPDC1 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.452e-77
Identity = 119/224 (53.12%), Postives = 163/224 (72.77%), Query Frame = 2 
Query:  242 GMNPDSDSIKWVITKDDYSTASILNEIQKLPEPKYSAFGERIRHVAPTAMQCSMFCGGKQCKYCNPARFKKEPNQDAINGLYSAWVTSNILATSRPSTTAIKQYNIIEQFQKKEIRSIINLQHPGEHAACGFGLE-AGGFTYVPQDFMDNDVFFYNFGWNDYGVRSLQSILDMVKVFDFALSKGKAAVHCHAGLGRTGVLIACYLIYSMRLTSHEAIMKVREAR 910
            G+ P ++     +  +    A++   +++ P PKY+  GER+RHV P  M CSM CGG+ CKY NPAR+ ++  + AI G+YS+WVT NILA +RPS+  +++Y+II+QF    I++IINLQ PGEHA+CG  LE   GFTY+P+ FM+  ++FYNFGW DYGV SL +ILDMVKV  FAL +GK A+HCHAGLGRTGVLIACYL+++ R+T+ +AI+ VR  R
Sbjct:    4 GVLPQNEQPYSTLVNNSECVANMKGNLER-PTPKYTKVGERLRHVIPGHMACSMACGGRACKYENPARWSEQ--EQAIKGVYSSWVTDNILAMARPSSELLEKYHIIDQFLSHGIKTIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMTFALQEGKVAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKR 224
The following BLAST results are available for this feature:
BLAST of TCONS_00056157 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTPC11.452e-7753.13Protein tyrosine phosphatase domain-containing pro... [more]
back to top