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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056231 ID=TCONS_00056231|Name=TCONS_00056231|organism=Clytia hemisphaerica|type=transcript|length=849bp
ATCCTCATCATATGATGGATTATATACTGTAAGAGAGCCAATGTTTTTTA
TGTTCAACTCGTTTATCATATCGATGATAGTTTTGGCACGCATACTATCT
ATCTCAATATTTAACAATGTGATTGGTGTGTTGTATGATAACAAGCGCTT
CATGCATAATTTTACCTCATCACTATCTTCGACAACGGTTATCATCTCAA
TTGTAACATAAAACGAAGTTGACTTTTGTAACAGATCTTCTGGTATTTTG
TTCAATAAAGAAGGAGGATGATCCATCAAAGTACGTTTTCCTTGTTCGTA
TTTGAAGTATGGTCTATAATATTTACTATAGTTGATCCTGATCTCTGTCT
CGTATTCCTCACCTGATACCAAAGAAATGAGATGCTTTTCATTCTCATCA
TATGATGGACTCCATACTTTAAGAGAACCAATGTTTTCGATGTTCAACTC
GTTTATCATATCGATGATGGTTCTGACATACATACTATTTATCGCAATAT
TTGACCATGTGATTGGTGTGTTGTATGATAACATGCGCCGAATAAATAAT
TTCACTCCATCACTATTATTAACATCGGATATCAGCTCAATTTCAACATG
AAACAAAGTTGACTTTTGTAACAGATCTTCTGGTATTTCCTTCAATAAAG
AAGGAGGACACTTTAAAGTAAGTTTTCCTTGTTCGCATTCGAAGTATGGT
GTATAACGATCATCAAACATGCTGATCTCTGTCTCGCATTTTTCACCTGA
TACCAAAGAAATGAGATACTTTCCATCCTCATCATATGATGGATTATATA
CTGTAAGAGAACCAAtgttttttatgttcaaattgTTTATCATATCGAT Run BLAST on NCBI protein sequence of TCONS_00056231-protein >TCONS_00056231-protein ID=TCONS_00056231-protein|Name=TCONS_00056231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
IDMINNLNIKNIGSLTVYNPSYDEDGKYLISLVSGEKCETEISMFDDRYT
PYFECEQGKLTLKCPPSLLKEIPEDLLQKSTLFHVEIELISDVNNSDGVK
LFIRRMLSYNTPITWSNIAINSMYVRTIIDMINELNIENIGSLKVWSPSY
DENEKHLISLVSGEEYETEIRINYSKYYRPYFKYEQGKRTLMDHPPSLLN
KIPEDLLQKSTSFYVTIEMITVVEDSDEVKLCMKRLLSYNTPITLLNIEI
DSMRAKTIIDMINELNIKNIGSLTVYNPSYDED Run BLAST on NCBI transcript from alignment at scaffold_269:157911..158759 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056231 ID=TCONS_00056231|Name=TCONS_00056231|organism=Clytia hemisphaerica|type=transcript|length=849bp|location=Sequence derived from alignment at scaffold_269:157911..158759 (Clytia hemisphaerica)
ATCGATATGATAAAcaatttgaacataaaaaacaTTGGTTCTCTTACAGT
ATATAATCCATCATATGATGAGGATGGAAAGTATCTCATTTCTTTGGTAT
CAGGTGAAAAATGCGAGACAGAGATCAGCATGTTTGATGATCGTTATACA
CCATACTTCGAATGCGAACAAGGAAAACTTACTTTAAAGTGTCCTCCTTC
TTTATTGAAGGAAATACCAGAAGATCTGTTACAAAAGTCAACTTTGTTTC
ATGTTGAAATTGAGCTGATATCCGATGTTAATAATAGTGATGGAGTGAAA
TTATTTATTCGGCGCATGTTATCATACAACACACCAATCACATGGTCAAA
TATTGCGATAAATAGTATGTATGTCAGAACCATCATCGATATGATAAACG
AGTTGAACATCGAAAACATTGGTTCTCTTAAAGTATGGAGTCCATCATAT
GATGAGAATGAAAAGCATCTCATTTCTTTGGTATCAGGTGAGGAATACGA
GACAGAGATCAGGATCAACTATAGTAAATATTATAGACCATACTTCAAAT
ACGAACAAGGAAAACGTACTTTGATGGATCATCCTCCTTCTTTATTGAAC
AAAATACCAGAAGATCTGTTACAAAAGTCAACTTCGTTTTATGTTACAAT
TGAGATGATAACCGTTGTCGAAGATAGTGATGAGGTAAAATTATGCATGA
AGCGCTTGTTATCATACAACACACCAATCACATTGTTAAATATTGAGATA
GATAGTATGCGTGCCAAAACTATCATCGATATGATAAACGAGTTGAACAT
AAAAAACATTGGCTCTCTTACAGTATATAATCCATCATATGATGAGGAT Coding sequence (CDS) from alignment at scaffold_269:157911..158759 >TCONS_00056231 ID=TCONS_00056231|Name=TCONS_00056231|organism=Clytia hemisphaerica|type=CDS|length=849bp|location=Sequence derived from alignment at scaffold_269:157911..158759 (Clytia hemisphaerica)
ATCGATATGATAAAcaatttgaacataaaaaacaTTGGTTCTCTTACAGT
ATATAATCCATCATATGATGAGGATGGAAAGTATCTCATTTCTTTGGTAT
CAGGTGAAAAATGCGAGACAGAGATCAGCATGTTTGATGATCGTTATACA
CCATACTTCGAATGCGAACAAGGAAAACTTACTTTAAAGTGTCCTCCTTC
TTTATTGAAGGAAATACCAGAAGATCTGTTACAAAAGTCAACTTTGTTTC
ATGTTGAAATTGAGCTGATATCCGATGTTAATAATAGTGATGGAGTGAAA
TTATTTATTCGGCGCATGTTATCATACAACACACCAATCACATGGTCAAA
TATTGCGATAAATAGTATGTATGTCAGAACCATCATCGATATGATAAACG
AGTTGAACATCGAAAACATTGGTTCTCTTAAAGTATGGAGTCCATCATAT
GATGAGAATGAAAAGCATCTCATTTCTTTGGTATCAGGTGAGGAATACGA
GACAGAGATCAGGATCAACTATAGTAAATATTATAGACCATACTTCAAAT
ACGAACAAGGAAAACGTACTTTGATGGATCATCCTCCTTCTTTATTGAAC
AAAATACCAGAAGATCTGTTACAAAAGTCAACTTCGTTTTATGTTACAAT
TGAGATGATAACCGTTGTCGAAGATAGTGATGAGGTAAAATTATGCATGA
AGCGCTTGTTATCATACAACACACCAATCACATTGTTAAATATTGAGATA
GATAGTATGCGTGCCAAAACTATCATCGATATGATAAACGAGTTGAACAT
AAAAAACATTGGCTCTCTTACAGTATATAATCCATCATATGATGAGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056231-exon-scaffold_269-1491911889:157911..158759 | TCONS_00056231-exon-scaffold_269-1491911889:157911..158759 | Clytia hemisphaerica | exon |
| TCONS_00056231-exon-scaffold_269-1510915933:157911..158759 | TCONS_00056231-exon-scaffold_269-1510915933:157911..158759 | Clytia hemisphaerica | exon |
| TCONS_00056231-exon-scaffold_269-1575043694:157911..158759 | TCONS_00056231-exon-scaffold_269-1575043694:157911..158759 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_269 | supercontig | scaffold_269:157911..158759 . |
Blast
The following BLAST results are available for this feature:
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