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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056233 ID=TCONS_00056233|Name=TCONS_00056233|organism=Clytia hemisphaerica|type=transcript|length=1228bp
attattCTAAACAATATGCTAACTCcgaatctcaccctgatattcttata
aaaaaagcgtgtaacatagaaactgaaaaaaaatataaaatgaacaTAGT
CTTTATCGTCTATGTAGCGCCGCCCTCTTACCTAAGATTTCAAATCTAAA
AGGAGAGCGCCCACACCCTGAAGAGCGTTGCTAATTACAAATCATTGGAC
TACTGGCCATTTTATTTGACCTTAGACAAAAAGAACTAAATATTACAATA
GATGTTTTATCCTTTAAAATTCACAATACACGTtgtttatataagaacat
aaagcttcaatggccaaaataataagaacaagttaagaacattttaagac
tatgtGGACTTTAAAACGTGTAAGGAAGTTATTAATGAGATGATGCCAAT
GTTCAATGCTTAAAAACCCAAATAGTAGTATTGTTTCCTTTTCTAAAACC
AAGATGATTTTGGAAATAGATATTTCAAACTTTGAGAAGTGCTTCACAtc
taaaatctcaaaagaatTAAAGACCGTCGCGGTGCTACGGTACGTTCAGT
CATGACTCGTTTTTCTATATTTCAATCAGTAAAATATTaaacgaaaaaaa
tgaaattcctcCATAAATTTTAGCTAGGCTAGTATATGTCTAATTGGAAC
cgctaattagcggacaccatttGGGGAAATGGATCAATATTCCCTAATTA
GAAGTGTCTGCATTTGAGAGTGTCTGTTAATTACATACAGTGCGGCCTAA
AAAAACAGAcaaatttttatagaaaaaaaatatcctcAAAAATCATGATC
TAATTGAGCTTAGAAGGTACGATGAAGTATAGAATAGTTATGAAGTATAG
AATAGTCATGATGTATAGAATAGTCATGAAATTCCGCATAAATCATGAGG
ATTTTTAATTAGAAGTGTCAGCATTTGAGAGTGTCTGTTAATTGGAAGTT
CTACTGTATGAGATAttcaaaacacgtttttttataagaacaaactatat
aagagcataaggcttcgatgacccaaattttaagaacaatttaagggtTT
GCGGGCGTTacaacacccaatttcttaggaaaatggacgaaaatactcac
aaaatggggaaattaagaacatgttgagaacatttttaggcttaaaactc
aaaaagttaagaatatccaaaggcttccaaaattttaggtgttcttataa
aaaaacgtgtatttcaacatggaaaatc Run BLAST on NCBI transcript from alignment at scaffold_269:159909..161136 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056233 ID=TCONS_00056233|Name=TCONS_00056233|organism=Clytia hemisphaerica|type=transcript|length=1228bp|location=Sequence derived from alignment at scaffold_269:159909..161136 (Clytia hemisphaerica)
gattttccatgttgaaatacacgtttttttataagaacacctaaaatttt
ggaagcctttggatattcttaactttttgagttttaagcctaaaaatgtt
ctcaacatgttcttaatttccccattttgtgagtattttcgtccattttc
ctaagaaattgggtgttgtAACGCCCGCAAacccttaaattgttcttaaa
atttgggtcatcgaagccttatgctcttatatagtttgttcttataaaaa
aacgtgttttgaaTATCTCATACAGTAGAACTTCCAATTAACAGACACTC
TCAAATGCTGACACTTCTAATTAAAAATCCTCATGATTTATGCGGAATTT
CATGACTATTCTATACATCATGACTATTCTATACTTCATAACTATTCTAT
ACTTCATCGTACCTTCTAAGCTCAATTAGATCATGATTTTTgaggatatt
ttttttctataaaaatttgTCTGTTTTTTTAGGCCGCACTGTATGTAATT
AACAGACACTCTCAAATGCAGACACTTCTAATTAGGGAATATTGATCCAT
TTCCCCaaatggtgtccgctaattagcgGTTCCAATTAGACATATACTAG
CCTAGCTAAAATTTATGgaggaatttcatttttttcgtttAATATTTTAC
TGATTGAAATATAGAAAAACGAGTCATGACTGAACGTACCGTAGCACCGC
GACGGTCTTTAattcttttgagattttagaTGTGAAGCACTTCTCAAAGT
TTGAAATATCTATTTCCAAAATCATCTTGGTTTTAGAAAAGGAAACAATA
CTACTATTTGGGTTTTTAAGCATTGAACATTGGCATCATCTCATTAATAA
CTTCCTTACACGTTTTAAAGTCCacatagtcttaaaatgttcttaacttg
ttcttattattttggccattgaagctttatgttcttatataaacaACGTG
TATTGTGAATTTTAAAGGATAAAACATCTATTGTAATATTTAGTTCTTTT
TGTCTAAGGTCAAATAAAATGGCCAGTAGTCCAATGATTTGTAATTAGCA
ACGCTCTTCAGGGTGTGGGCGCTCTCCTTTTAGATTTGAAATCTTAGGTA
AGAGGGCGGCGCTACATAGACGATAAAGACTAtgttcattttatattttt
tttcagtttctatgttacacgctttttttataagaatatcagggtgagat
tcgGAGTTAGCATATTGTTTAGaataat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056233-exon-scaffold_269-1491911889:159909..161136 | TCONS_00056233-exon-scaffold_269-1491911889:159909..161136 | Clytia hemisphaerica | exon |
| TCONS_00056233-exon-scaffold_269-1510915933:159909..161136 | TCONS_00056233-exon-scaffold_269-1510915933:159909..161136 | Clytia hemisphaerica | exon |
| TCONS_00056233-exon-scaffold_269-1575043694:159909..161136 | TCONS_00056233-exon-scaffold_269-1575043694:159909..161136 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_269 | supercontig | scaffold_269:159909..161136 . |
Blast
The following BLAST results are available for this feature:
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