TCONS_00056203 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056203
Unique NameTCONS_00056203
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length590

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056203 ID=TCONS_00056203|Name=TCONS_00056203|organism=Clytia hemisphaerica|type=transcript|length=590bp
ACAAGAATTACTTTTGGAtgacgaaaatgaaaatttagatgGAGCTTCGT
TCCAGGAGCACAGTGAGCACATGcaATGTGGAAGTGAAATGAGGAACTGC
AAAGACGTCAAAGAGATTTGTCCACATTGCAAATCAGGAATTTATGAAAT
GGAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGACTTGACTACAGACG
GTGGCGGCTGGCTGCAAATAACGAATATCAAATTCGACGACGCAAGTAAA
GTCAACTCAATATATACGAATCACATAGCTCAGCCATCGTCTATCGCTGA
CCTCCAAAATGCACCAAACTCGCAATTCATGTTGGACCCACTCGCCTTAC
AAAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAGAATCAAATGCTAT
AAATCATGGCACGGCAGAACCCTTGACGTCGTTCTATACGGTGAAAAGAT
ACACAAATATGTAAATAGCGAAGCGTTCACCGTCGGAGGATGCGACGCAG
TTCGGTTTTTACCAGGTGATAACTCATCAATGTTCCTGTCCCCTTGTGCT
GATTACAGAATCGGAACAGGTGAATATTTGTTTTATCAAT
Run BLAST on NCBI

protein sequence of TCONS_00056203-protein

>TCONS_00056203-protein ID=TCONS_00056203-protein|Name=TCONS_00056203-protein|organism=Clytia hemisphaerica|type=polypeptide|length=196bp
QELLLDDENENLDGASFQEHSEHMQCGSEMRNCKDVKEICPHCKSGIYEM
EILGEKTKAFCDLTTDGGGWLQITNIKFDDASKVNSIYTNHIAQPSSIAD
LQNAPNSQFMLDPLALQSLFNDEGYSELRIKCYKSWHGRTLDVVLYGEKI
HKYVNSEAFTVGGCDAVRFLPGDNSSMFLSPCADYRIGTGEYLFYQ
Run BLAST on NCBI

transcript from alignment at scaffold_269:294206..303150+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056203 ID=TCONS_00056203|Name=TCONS_00056203|organism=Clytia hemisphaerica|type=transcript|length=8945bp|location=Sequence derived from alignment at scaffold_269:294206..303150+ (Clytia hemisphaerica)
ACAAGAATTACTTTTGGAtgacgaaaatgaaaatttagatgGAGCTTCGT TCCAGGAGCACAGTGAGCACATGGTAAGCgaatttttttataggaacaac ttttaagaacaatgagactaaaaatgccaaaaataacAACAATAGATTGT ATcggatttctttatttttctaaaaaagcgttgtctggtgggattgtttc gggagtattacaaatagaattccctcgagtaATTCCTAAAAGatatttct attgtaatactcccaaaacaatcccacaaagcatcgtttttttagaaaaa tgaaaaactccgAAAAGATCTATTGTCAACGAACCCTTAGAGAAACCAAA CCTTACCGTCCTAATACCCAGCATCTATTTTTTACCCCCTCCCCCCAGGC CCAGTGTGGAAACAATGCAAAGTCCATGACGAATTGTTATTTGTTAAAAC TGAGGTCTACATCAAAAAGAGTTCCGCTTTGGCAGGCGAAATGTCAGGGG AGTGGGGTCTGGGTGGCGGTGTTAGTCTCCCAAATGGGTCCAGGGCTGAG CATTGGATGGGGTTCAGCGGGTAAACGCCCCGAAAGCCCTGGGATATTGG ATCTTCTCACACctaaaagttgctcaaaatttgCTATATTGTATAGTTTT ATAATTAATAAGGCTAGAAAAACAGCTTGTATTGCTGGTACATATAAGTT TGATGCGCTTAAACCTGGTGTAATAAAATCGGGCGTTACAATGGCAGCTC TCCTCTCGTCTCGGAAAGCTTTGACTTACGCCAATATCTTACTTTATATA TGCTCCTTACGCTAATACGCCAAATGCTATTACTGCCGGCGTACTGTGCA ACATTTCCAGGCTGGCCTCTGGCTTTATAGAGGCTGGAAATTCGTACTCT TAGTccctttcttttaattttctttctttagcaATGTGGAAGTGAAATGA GGAACTGCAAAGACGTCAAAGAGATTTGTCCACATTGCAAATCAGGAATT TATGAAATGGAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGACTTGAC TACAGACGGTGGTAAGATATTTTGAGTTAATCTTTCGTCCACCGAATGTG CCNCTACAGACGgcggtaaaatatttttgatttaatttttcgTCCAACGA ATGTGCCAGCCCATAGTGCTTAGTTCACTAATTTAAGCTATCCaaacaaa atttctattttttttgaagGCAACAAAACATATAAAAGAACGTCAAAACA CGAGATATTATTATAGAAAGATCAAAAGAAATGTCCAatgacaaaaaagt taaaagaaattttaaagaaatttttccatAAATCTTTTAATCAAACATTT TTATAGGCGGCTGGCTGCAAATAACGAATATCAAATTCGACGACGCAAGT AAAGTCAACTCAATATATACGAATCACATAGCTCAGCCATCGTCTATCGC TGACCTCCAAAATGCACCAAACTCGCAATTCATGTTGGACCCACTCGCCT TACAAAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAGAATCAAATGC TATAAATCATGGCACGGCAGAACCCTTGACGTCGTTCTATACGGTGAAAA GATACACAAATATGTAAATAGCGAAGCGTTCACCGTCGGAGGATGCGACG CAGTTCGGTTTTTACCAGGTGATAACTCATCAATGTTCCTGTCCCCTTGT GCTGATTACAGAATCGGAACAGGTGATTATTTGTTTTATCAATTCCCCCT TTGGATATGGGGAAACGGTCACGTGACTATTTTAAAATCTACCGCTCGGT ATGAATGCGATGACGTTAGCAGTGAGATTAACCATGACATTCAACAAAGA TATCTTGGTTATTGgtatttttatataagataaAAATTAGTCTCTTTTGA AAGACATTATTCTTTAAGGAACACAAAACACATCTATGAACCCCATACAC ATAGTGCATCTATGAACCCCATACACCAAGTGCATCTATGAACCCCATAC ACATAGTGCATCTATGAACCCCATACACCAAGTGCATCTATGAACCCCAT ACACCAAGTGCATCTATGAACCCCATACATCAAGTGCATCTATGAACCCC ATACACCAAATGCATCTATGAACCCCATACACCAAGTGCATCTATGAACC CCGTACACCAAATGCATCTATCAATACCATACACCAAGTGCATCTATGAA CCCCATACACCAAATGCATCTATGAACCCCATACACCAAGTGCATCTATG AACCCCGTACACCAAATGCATCTATCAATACCATACACCAAGTGCATCTA TGAACCCCATACACCAAATGCATCTATGAACCCCATACACCAAGTGCATC TATGAACCCCGTACACCAAATGCATCTATCAATACCATACACCAAGTGCA TCTATGAACCCCATACACCAAATGCATCTATGAACCCCATACACCAAATG CATCTATGAACCCCATACACCAAATGCATCTATCAATACCATACACCAAG TGCATCTATGAACCCCATACACCGAGTGCATCTATAAATCCCATACACCG AGTGCATCTATAAACCCCATACACCGAGTACATCTATAAACCCCATACAC CGAGTGCATCTATAAACCCAATACACCGAGTGCATCTATAAACCCAATAC ACCGAGTGCATCTATAAACCCCATACACCAAGTGCATCTCTCAACCCCAT ACACCGAAAGCATCTATCAACCCCATGAACCAAGTGCATTTATGAACCCT ATACACCAAGTGCATCTATGAACCCATACACCAAGTGCATCTATCAACCC ATACACCAAGTGTATCTATAAACCCCGTAAACCAAGTGCATCTATGAACC CCATACACCAAGTGCATCTATGAACCCCATAAACCAAGTGCATCTATCAA CCCCATTCCCAAGTGCATCTATGAACCCCATCAACCAAGTGCATCTATGA ACCCCATAAACCAAGTGCATCTATGAACCCCATACACCAAGTGCATCTAT GAACCCCATACACCAAGTGCATCTATGAACCCCATAAACCAAGTGCATCT ATGAACCCCATACACCAAGTGCATCTCTCAACCCCATACACCGAAAGCAT CTATCAACCCCATGAACCAAGTGCATTTATGAACCCTATACACCAAGTGC ATCTATGAACCCATACACCAAGTGCATCTATCAACCCATACACCAAGTGT ATCTATAAACCCCGTAAACCAAGTGCATCTATGAACCCCATACACCAAGT GCATCTATGAACCCCATAAACCAAGTGCATCTATCAACCCCATACACCAA GTGCATCTATGAACCCCATAAACCAAGTGCATCTATGAACCCCATACACC AAGTGCATCTATGAACCCCATACACCAAGTGCATCTATAAACTCCATAAA CCAAGTGCATCTATGAACCCCATACACCAAGAGCATCTCTCAACCCCATA CACCAAGAGCATCTCTCAACCCCATACACCGAAAGCATCTATCAACCCCA TGAACCAAGTGCATTTATGAACCCTATACACCAAGTGCATCTATTAACGC CAAGTGCATTTTAAAAGGGTTTGGGTTCGAGTAAACATTGGTTGAATGAC GTCATATACCTGAAGTCGCTGCATTGACTGATCGCATTGTGATGCCATCT AACCTCGTGTAAAGTCGAACTTCAACACCATTTAGCGAAAGGGTGTATCT ATCTGATTATGCGTTTGTATGTTTTTTTGATATATTTGAGgatttacttt tgactttttccccattttgtatgtattttgatgaacttgtgTAAATAAGT GTACGTAggtgtgtttatcaaaaaaaaaaattgcaatttattgtttctcc actattacttttcttcaatcaccttcatttggattaggtttttatTTCAC ATACCAATGTTTaagtttttgctaaatttcattcatgattcttctttttt tttaaaaattttacattgGCACAAACCAATCCAGCCTTTCATATAATATT CCAAAAATGGTATGTTAGAAAAGTTGGACCGATTTTCCCTAGCCCTttta agaacacgaggcttcaATGAGCTTCTTAAGAAATGGCACGACAATAATCA CAAAGTGGTGAAATGAGGTTGCAACGAGGTGAAGAAAATAGACTAAAACT TTTTTGAACACTTTCGACGTTAAACAAGCACGTTAAATACATTTTAATAT TTGTGATTTCGGTTCCCCTTCAATGGGAAGTGTCATGAATAACCTCTTGT TTAACAACAAGACGACATTTCGTCTCGTTTTTGCTCAGCGTCACCGGAAA GTTTGCAGTCTCaaacctttttttgaaaagggtTAATTGTAAAAGGGTTA ATTGTAGACTATGCTAAAGTCTAAGACGAATTCGAATAATAAAGAATAAC CTCAAACACGCAAATTAGCAGTCGAATAGAAATTTTGTCTGTGCGGGCAA AAAATAGTCGGAGGGGCTCAATGTACAGTCTCTATTTTCCGCCACGCAAC ATAATaacttttataatatacaactaTGCTATATCgtaatatcataataa tatattacatGATGCTATCGCATCGTCTAGGTTAAATAATAACATAGTCA GTtgtcccagggggggggggggtttNctcaaaaaaattttgctccccgta tggagactcaactgtatttattttttactgGCAGCTCTAACTCCATCTTT TAAGAATTCTTTCTTCCATCCCCgcggggtactagggttggcgaatgagg ggtatgtgcggacgggacctccgaaaaccgacccttggagagactgattt ttgctgaaaaggtgacccttagagagactttctgaattttttttttcgat ttttgaaaaaagtcatacccttagagagactttattacaattttttctct ggaaatcaaaaaatttcctaaacatcctgaattttccaacccttagagag actaatttaaaactttctgatttttccgacccttagagagactttaaaag gtgaaaaaaccgaccgttaccgtccgcacatacccatcatccatttttgc ctaagtaccccccccccggtcAGTTGTCCAAACAAGATTTTCGTCTTAAA CAGAAAgtggattttacacagcaaattagcacataggctgcgtttagacc aactggcatttgtaatttggcatttgctcatgagggattcgattttaata gctttccCATTGTATTTtttgtcatggcatttaaggaatcgtctttttag agtcattactgaaaagttgattccctcaagttcaactttgacagatcaaa caatgaaaagcatggaatttctcaaaaactgcagtcattgagactgaaac tttttgccgtagggctaggctatggcaaatcttgcaatttttacaatcta tagaaagaactgaataaaaaacgtgcaaatactttaaaaaatcaaaaatg tcattttttctctttgtttttgttcctttgtttgatttgaaatgccagaa aaggggattcctttgctcaaaatggcatttcaaatgccaacgaaatgcca acacgctggcatcattaggcatttgataAACCGAACAATTGTGCGGaaaa atagaattcaaaagaatactgcaagcaattacaaatgccaggctggtcta aacgcagccatatTCTTGAAGTTTTGGTAATACCATACATAGAGATATCA TTTAATAAAGAGAAATCTTTCCTAAGCTGTGTCGTCATCCAttcattttt cctttgttaaaagCAATTAGtggtcgtaaaaacagtttctcaaaatctga tgcGTGGAAAAAGATTTCATGAAAAGGATACGTTTACACTGTAGTTTTCT CCAAATCaacagattttaatttttgaaaaccattgatatttttcgatgta CTTTACCTTTTGTTTAGAAATTTTGGGAACTAAATTTTTgtagtttcatt tttcttcatctCAAAATTTGAAGCGTGAATAGAAATCTAATCAGAAGAAA TAACTAATTTCGTTGAAATTTCTatgaataaaaatttctaattaaaagtg cgttttcaaatagtttttaaGATAGGTAAATATATAAATCGTGCtgaatt caaaaatatattttttatttcgattaaAAGGACCGAAGTGCCCTAAATTT CCGCTCCAAAATCTTCTTATTATGTAAATAATTTTCTAGAATTGAAAAGA ATTCAATCAGTCTtgagaaaatatgcaattaaaatacgatcaaaaaaaaa gaattcaattACTACTTCGCACGTTCAAAAGAAATCCCATTGGCACTAAG GGACCCCTCACAGGCGCGCTTCATTTTGAGGATAAACGTTTGATAACTCT CTATTAATTCATATTTCTATGgtattaggcgagaccaatttgattagttt tttacgggcccgaccgaccctgatattccaaaaatcaaaatcaaaataaa attaattttggtagtacattttctaaaatttggtagtttttccaaggtta tGAGAATttcatgttcaatttttcaatttatccatgaattcgaccattgt gtgtctttttattttctatttcgcattttcgCCAACAGGAAgtagttttt tacttttaagttcattttttcaccgaccgaccgaccctcttttttggatA GCTAAATTGGCCTCGTCTTATGCAGAATTTGGATataatgtttttttgat ttgaatcgAGTTTTAACAGTTTTGTAAGCCCCATGGcaatttattcaaaa ttgatTGAAGTAAGATTTTTTGCGTGAATCggttaaaaatgttttaattt ttttatttgaaaaaatgaggcgaaaaattaataataaataaagTCGATTA TAGattattcaaaataaagaataaaatatCCATGAATACTATTTATGTAT TTTATTGAGTAATTTATTTTAAGGGTGAAAATATTCGGTGTATCTTATCT TTCTTGATTTCGCTGATGAATTGTTCGCaaaataaaatatctaaatGATG GATGACTGatagattgactttgatttctcATCTATTGAAACATGACTCTG CATTTGGCAGTATTTCTGACACAagtaattttcaaatgataagaAAAGCT GGATGGTTTTCGGTTCCAAAATTGATAGAACCGATATTTAACATCTAGAC AGTTTTTTCACTATTTCCATGGGTTCCAAGGTCAGCTATCCATAAACTGA AGGCAACATAGGAAGAAGCGGTGATTACAACCAGTTTTAGGCGCTGACAC CTTTAGGCTACCTGGCCACCGCTCCTTAGAGTTCAAATATAATTATGCAT TTGGCAGTTTTTTTGACACAAGTAATTGTTATCTATGCGCAATGGTACGA AAAAGATCTAACCAACCAACCAACAACAACAAGTATTGATACAAAGGATG CTTCAAAACCTGTCCCAGCAAGATCACCTATCGAGTGTGTTTTGAAATGC AAGAGAAATCTCCAAGAAAGTTATTTCGTTGAAGAGAAACAACTTtgttt ttgctttcaaagtaaAGAACAAGATTTATTTCCggatgatgaaaatgaaa atttagatgGAGCTTCGTTCCAGGAGCACAAGGAGCACATGGTAAGCAAA ATTTTGTATAGGAGCAACTTTTAAGAACAACGAgactcaaaaatgccaaa aattgcaaaaatagatcttatcggagtttttcaTTTCTCTGAAAAAGCGT tccattgtgggattgtttcgggagtattacaatagaattccctcgaggaa ttcctaagagatttctattgtaatattcccgaaacaatcccacaatgcat cgcttttttagaaaaattagaaactccgataagatctattgtcaacggac ccttagagagaccaaagcTTACCGTCATAATACCCATCATCTATTTTTGC CAGAGTACCCCCTCCCCTCGGTCTCGGGCTTGATAGAGGCAGGAAATTGC TGCTCTCAGTCCcctggttttaattttttttctttagcaATGTGGAAGTG AAATGAAGAACTGCAAAGACGTCAAAGAGATTTGTCCATATTGCAAATCA GCAATTTATGAAATGGAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGA CTTGACTACAGACAGTGGTAAGATATTTTCGATTTAATTTTTCGTCCAAC GAATGTGCCAGCCCATAGTGCTTAGTTCACTAATTTAAGCTATCCAAACA AAATATTTGGAAGGTAACAAAATATATAATAGGTCATTCATTCGATCAAA ACACAAGCCCCTAAAAATGTCGAATCGCAAAAGgttaaagtttttgtttt tacataagtgttcccgtttcatatcagacacatatatctcatatcagggc agtgtctgccttttgttatattatgccgatataagcaaaaaaaaattttc ccctcccctttctgaccaatcttactCCACATCCTTGTCAATCTAATgtg aaaaaacttgtaaattaaaattgatgagtaagcaaccgatatcactctta tttaaaaacaaaaactttaaaagaaatgttaagattttttaatcgaacat ttttatagGCGGTTGGCTGCAAATAACAAATATCAAATTCGACGACGCAA ACAAAATCGATTCAATCTATACAAATCACATAGCTCAGCCATCGTCTATC ACTGACCTCCAAAATGCACCAAACTCGCAATTCATGTTGGACCCACTTGC CTTACAAAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAGAATCAAAT GCTATAAACCATGGCACGGCAGAACCCTTGACGTCGTTCTATACGGTGAA AAGATACACAAATATGTAAATAGCGAAGCGCGGACCCTCGGTGGATGCGA AGCAGTTCGATTTTTACCAGATGATAACTCATCATTATCCTATGTCTCTT GTGCTGATTACAGAATCGGATCAGGTGAATATTTGTTTTATCAAT

Coding sequence (CDS) from alignment at scaffold_269:294206..303150+

>TCONS_00056203 ID=TCONS_00056203|Name=TCONS_00056203|organism=Clytia hemisphaerica|type=CDS|length=2352bp|location=Sequence derived from alignment at scaffold_269:294206..303150+ (Clytia hemisphaerica)
CAAGAATTACTTTTGGAtgacgaaaatgaaaatttagatgGAGCTTCGTT
CCAGGAGCACAGTGAGCACATGcaATGTGGAAGTGAAATGAGGAACTGCA
AAGACGTCAAAGAGATTTGTCCACATTGCAAATCAGGAATTTATGAAATG
GAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGACTTGACTACAGACGG
TGGCGGCTGGCTGCAAATAACGAATATCAAATTCGACGACGCAAGTAAAG
TCAACTCAATATATACGAATCACATAGCTCAGCCATCGTCTATCGCTGAC
CTCCAAAATGCACCAAACTCGCAATTCATGTTGGACCCACTCGCCTTACA
AAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAGAATCAAATGCTATA
AATCATGGCACGGCAGAACCCTTGACGTCGTTCTATACGGTGAAAAGATA
CACAAATATGTAAATAGCGAAGCGTTCACCGTCGGAGGATGCGACGCAGT
TCGGTTTTTACCAGGTGATAACTCATCAATGTTCCTGTCCCCTTGTGCTG
ATTACAGAATCGGAACAGGTGAATATTTGTTTTATCAACAAGAATTACTT
TTGGAtgacgaaaatgaaaatttagatgGAGCTTCGTTCCAGGAGCACAG
TGAGCACATGcaATGTGGAAGTGAAATGAGGAACTGCAAAGACGTCAAAG
AGATTTGTCCACATTGCAAATCAGGAATTTATGAAATGGAAATTCTTGGT
GAAAAAACGAAAGCCTTTTGTGACTTGACTACAGACGGTGGCGGCTGGCT
GCAAATAACGAATATCAAATTCGACGACGCAAGTAAAGTCAACTCAATAT
ATACGAATCACATAGCTCAGCCATCGTCTATCGCTGACCTCCAAAATGCA
CCAAACTCGCAATTCATGTTGGACCCACTCGCCTTACAAAGCCTTTTCAA
TGACGAAGGTTACAGCGAGCTAAGAATCAAATGCTATAAATCATGGCACG
GCAGAACCCTTGACGTCGTTCTATACGGTGAAAAGATACACAAATATGTA
AATAGCGAAGCGTTCACCGTCGGAGGATGCGACGCAGTTCGGTTTTTACC
AGGTGATAACTCATCAATGTTCCTGTCCCCTTGTGCTGATTACAGAATCG
GAACAGGTGAATATTTGTTTTATCAACAAGAATTACTTTTGGAtgacgaa
aatgaaaatttagatgGAGCTTCGTTCCAGGAGCACAGTGAGCACATGca
ATGTGGAAGTGAAATGAGGAACTGCAAAGACGTCAAAGAGATTTGTCCAC
ATTGCAAATCAGGAATTTATGAAATGGAAATTCTTGGTGAAAAAACGAAA
GCCTTTTGTGACTTGACTACAGACGGTGGCGGCTGGCTGCAAATAACGAA
TATCAAATTCGACGACGCAAGTAAAGTCAACTCAATATATACGAATCACA
TAGCTCAGCCATCGTCTATCGCTGACCTCCAAAATGCACCAAACTCGCAA
TTCATGTTGGACCCACTCGCCTTACAAAGCCTTTTCAATGACGAAGGTTA
CAGCGAGCTAAGAATCAAATGCTATAAATCATGGCACGGCAGAACCCTTG
ACGTCGTTCTATACGGTGAAAAGATACACAAATATGTAAATAGCGAAGCG
TTCACCGTCGGAGGATGCGACGCAGTTCGGTTTTTACCAGGTGATAACTC
ATCAATGTTCCTGTCCCCTTGTGCTGATTACAGAATCGGAACAGGTGAAT
ATTTGTTTTATCAACAAGAATTACTTTTGGAtgacgaaaatgaaaattta
gatgGAGCTTCGTTCCAGGAGCACAGTGAGCACATGcaATGTGGAAGTGA
AATGAGGAACTGCAAAGACGTCAAAGAGATTTGTCCACATTGCAAATCAG
GAATTTATGAAATGGAAATTCTTGGTGAAAAAACGAAAGCCTTTTGTGAC
TTGACTACAGACGGTGGCGGCTGGCTGCAAATAACGAATATCAAATTCGA
CGACGCAAGTAAAGTCAACTCAATATATACGAATCACATAGCTCAGCCAT
CGTCTATCGCTGACCTCCAAAATGCACCAAACTCGCAATTCATGTTGGAC
CCACTCGCCTTACAAAGCCTTTTCAATGACGAAGGTTACAGCGAGCTAAG
AATCAAATGCTATAAATCATGGCACGGCAGAACCCTTGACGTCGTTCTAT
ACGGTGAAAAGATACACAAATATGTAAATAGCGAAGCGTTCACCGTCGGA
GGATGCGACGCAGTTCGGTTTTTACCAGGTGATAACTCATCAATGTTCCT
GTCCCCTTGTGCTGATTACAGAATCGGAACAGGTGAATATTTGTTTTATC
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035389XLOC_035389Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056203-exon-scaffold_269-1491911889:294206..294278TCONS_00056203-exon-scaffold_269-1491911889:294206..294278Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1510915933:294206..294278TCONS_00056203-exon-scaffold_269-1510915933:294206..294278Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1575043694:294206..294278TCONS_00056203-exon-scaffold_269-1575043694:294206..294278Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1491911889:295137..295266TCONS_00056203-exon-scaffold_269-1491911889:295137..295266Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1510915933:295137..295266TCONS_00056203-exon-scaffold_269-1510915933:295137..295266Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1575043694:295137..295266TCONS_00056203-exon-scaffold_269-1575043694:295137..295266Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1491911889:295562..295927TCONS_00056203-exon-scaffold_269-1491911889:295562..295927Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1510915933:295562..295927TCONS_00056203-exon-scaffold_269-1510915933:295562..295927Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1575043694:295562..295927TCONS_00056203-exon-scaffold_269-1575043694:295562..295927Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1491911889:303130..303150TCONS_00056203-exon-scaffold_269-1491911889:303130..303150Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1510915933:303130..303150TCONS_00056203-exon-scaffold_269-1510915933:303130..303150Clytia hemisphaericaexon
TCONS_00056203-exon-scaffold_269-1575043694:303130..303150TCONS_00056203-exon-scaffold_269-1575043694:303130..303150Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056203-proteinTCONS_00056203-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_269supercontigscaffold_269:294206..303150 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.105432 0 0 0 0 0 0 0.291587 0 0 7.15631 5.26674 1.19799 1.27417 0.419417 0.214945 12.601 9.73596 0.72025 0.131742 0.71907 1.4735 0.0999761 0.624584 0 0.272532 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056203 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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