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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056279 ID=TCONS_00056279|Name=TCONS_00056279|organism=Clytia hemisphaerica|type=transcript|length=1024bp
TCATCGCACTTACCAGAAATAATCGTTCCACCAAAACAAATGGATTTGAT
TAGGGTAAAATTTGAACGTGCTGAAAAACTTTATAGATCTTTAAAAACAC
CAAATGAAAAAATCTCCAATCAATACAAGCAAGCTAAGTTGTGATTAACA
ACAGCCATATCTGCCAACTCACAACCACCAGCACCAATCGCTACCCCTCG
AAGAAAGCTGATTCGTAAGCCATCTATGACCCTTAAAGAAAAAACCCCAT
CATCACCATCCAAAGCAGAATATCGTAAACAATGCTTGACTCTTACAGAA
CAGTTAAAGCAAGCCCAAGAAAAAATATCGAAACTTGAGACAGAActtgt
caaaaaagaaaacctcctgaaagaagaaagaaaaaaaacattaaaaattt
atcaaCCATTTACGACCTACAAGCTACTGGAATAAATTGTGAAACTCTTA
CGTTAACACAGCCAAATGAAAAAGCTATTGAATATTTATGCGGTATCaat
cttgaaaaatttaatacTTGGCCTTTAACGAAAATGGATATACTTTGCCC
AACTTGGCAAACACTTTGCCATGTTGTGAATTTGACTTTGCCCCCTATTG
GTCCAAAGGAGTAGCTTTTCAgtaattattttatttgaaattgatttatt
tttaacaatttaaaaattttgaatcttttaactgatataattttcatctt
aataataaataataattaatATATTAGATATTAATTAAATTACAGTAATA
ATGAATAAATTAActaactaaataaataaataattaataaataaataata
aataaatttggTAATAAAACAATATTCTCTAAAAATATTAGACAAACATA
CtcttaaaaaatacttttaaagtCAAGTTTTTGAATCAAgtcttaaaata
ctttaaaagctAATTCAagtacagtagtattttttttcactttgtagttg
aatatttatttttccttaAATTCTTTATTCTCTTGGTTAAATCTTGCTTA
CTCATATTATGAACTGTTTAAAAC Run BLAST on NCBI transcript from alignment at scaffold_27:110525..111548 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056279 ID=TCONS_00056279|Name=TCONS_00056279|organism=Clytia hemisphaerica|type=transcript|length=1024bp|location=Sequence derived from alignment at scaffold_27:110525..111548 (Clytia hemisphaerica)
GTTTTAAACAGTTCATAATATGAGTAAGCAAGATTTAACCAAGAGAATAA
AGAATTtaaggaaaaataaatattcaactacaaagtgaaaaaaaatacta
ctgtactTGAATTagcttttaaagtattttaagacTTGATTCAAAAACTT
GactttaaaagtattttttaagaGTATGTTTGTCTAATATTTTTAGAGAA
TATTGTTTTATTAccaaatttatttattatttatttattaattatttatt
tatttagttagTTAATTTATTCATTATTACTGTAATTTAATTAATATCTA
ATATattaattattatttattattaagatgaaaattatatcagttaaaag
attcaaaatttttaaattgttaaaaataaatcaatttcaaataaaataat
tacTGAAAAGCTACTCCTTTGGACCAATAGGGGGCAAAGTCAAATTCACA
ACATGGCAAAGTGTTTGCCAAGTTGGGCAAAGTATATCCATTTTCGTTAA
AGGCCAAgtattaaatttttcaagattGATACCGCATAAATATTCAATAG
CTTTTTCATTTGGCTGTGTTAACGTAAGAGTTTCACAATTTATTCCAGTA
GCTTGTAGGTCGTAAATGGttgataaatttttaatgttttttttctttct
tctttcaggaggttttcttttttgacaagTTCTGTCTCAAGTTTCGATAT
TTTTTCTTGGGCTTGCTTTAACTGTTCTGTAAGAGTCAAGCATTGTTTAC
GATATTCTGCTTTGGATGGTGATGATGGGGTTTTTTCTTTAAGGGTCATA
GATGGCTTACGAATCAGCTTTCTTCGAGGGGTAGCGATTGGTGCTGGTGG
TTGTGAGTTGGCAGATATGGCTGTTGTTAATCACAACTTAGCTTGCTTGT
ATTGATTGGAGATTTTTTCATTTGGTGTTTTTAAAGATCTATAAAGTTTT
TCAGCACGTTCAAATTTTACCCTAATCAAATCCATTTGTTTTGGTGGAAC
GATTATTTCTGGTAAGTGCGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056279-exon-scaffold_27-1491911889:110525..111548 | TCONS_00056279-exon-scaffold_27-1491911889:110525..111548 | Clytia hemisphaerica | exon |
| TCONS_00056279-exon-scaffold_27-1510915933:110525..111548 | TCONS_00056279-exon-scaffold_27-1510915933:110525..111548 | Clytia hemisphaerica | exon |
| TCONS_00056279-exon-scaffold_27-1575043694:110525..111548 | TCONS_00056279-exon-scaffold_27-1575043694:110525..111548 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_27 | supercontig | scaffold_27:110525..111548 . |
Blast
The following BLAST results are available for this feature:
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