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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056286 ID=TCONS_00056286|Name=TCONS_00056286|organism=Clytia hemisphaerica|type=transcript|length=741bp
CCCCTTTTGGCCACTAACAGACACTGCCCTGTCTTTCCAAAATATGGCTT
GACATTAAATCCAGTCGAACACAGTCGGTgtaataaatatttcaattcaa
aatGATGTTGGACACAAAAGTTACCTTAAATTTGATCCTTTGTCTCTTAG
GTAAAGCTTGTTGAAGTTTCTAAGATTTGAAAGTAATGATGAATTAATCC
ATTGGGATAAATGAGGGAGTGTATCATTGTGAAAAATGGAAATATTAgtg
caattcatgatatgcaccactgcaatgacttcgcgaaattatgcagcttt
tctgttttttttctccacccattacgtcactttttctattgtttaagtga
tgtattgggtggaaaattctcagaagactctccagtgacGCATATCATGA
GTAGGTACAATAAACTAACGCAATCTGCACTGATCCTTAACAGGAGAAAT
CTTACAGCTTACTTATAAAATCTTTCAACAGCAAATTGTAGGGATCTAAA
ATTTATAATACCTCACACTTGTGACAAACAGATAAACCTTTGAACCAGGG
ATGGCATAATGCATCCATTGCATTGATGCGTTTGCTTGGATCAACAACCA
GAAGCTGtgatACCAGATCCTGAGGACATTCACCAATTCCCTCCCATTCA
GCGCCTGCTAGACTATATTTTCCTTCCATGATTTTTCGATACATTATTGT
GTCTTTCCGGTGCCAAAAAGGACCTTGTCCAACAAGCCTGA Run BLAST on NCBI transcript from alignment at scaffold_271:79361..80344+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056286 ID=TCONS_00056286|Name=TCONS_00056286|organism=Clytia hemisphaerica|type=transcript|length=984bp|location=Sequence derived from alignment at scaffold_271:79361..80344+ (Clytia hemisphaerica)
CCCCTTTTGGCCACTAACAGACACTGCCCTGTCTTTCCAAAATATGGCTT
GACATTAAATCCAGTCGAACACAGTCGGTgtaataaatatttcaattcaa
aatGATGTTGGACACAAAAGTTACCTTAAATTTGATCCTTTGTCTCTTAG
GTAAAGCTTGTTGAAGTTTCTAAGATTTGAAAGTAATGATGAATTAATCC
ATTGGGATAAATGAGGGAGTGTATCATTGTGAAAAATGGAAATATTAgtg
caattcatgatatgcaccactgcaatgacttcgcgaaattatgcagcttt
tctgttttttttctccacccattacgtcactttttctattgtttaagtga
tgtattgggtggaaaattctcagaagactctccagtgacGCATATCATGA
GTAGGTACAATAAACTAACGCAATCTGCACTGATCCTTAACAGGAGAAAT
CTTACAGCTTACTTATAAAATCTTTCAACAGCAAATTGTAGGGATCTAAA
ATTTATAATACCTCACACTTGTGACAAACAGATAAACCTTTGAACCAGGG
ATGGCATAATGCATCCATTGCATTGATGCGTTTGCTTGGATCAACAACCA
GAAGCTGtgatatctttaaaaaagaaaaaaggctGATTTATGATACATTG
TTTTACAAAATGTTTAAAGGGGGGTGATTCAGAATTGAACtttgattatt
taaaaaaatttaagatcATGGTTACTAAACCCCAAATCGAAAATACTGAA
AATGGAATTAGCATTCAAAGACAAAAAGCATACccaaatcaaatttgaaa
agtgAATAGTAAATTAGCAGACAAATACAAGAATTAAATAATAATTTGAG
ACACACCAGATCCTGAGGACATTCACCAATTCCCTCCCATTCAGCGCCTG
CTAGACTATATTTTCCTTCCATGATTTTTCGATACATTATTGTGTCTTTC
CGGTGCCAAAAAGGACCTTGTCCAACAAGCCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056286-exon-scaffold_271-1491911889:79361..79971 | TCONS_00056286-exon-scaffold_271-1491911889:79361..79971 | Clytia hemisphaerica | exon |
| TCONS_00056286-exon-scaffold_271-1510915933:79361..79971 | TCONS_00056286-exon-scaffold_271-1510915933:79361..79971 | Clytia hemisphaerica | exon |
| TCONS_00056286-exon-scaffold_271-1575043694:79361..79971 | TCONS_00056286-exon-scaffold_271-1575043694:79361..79971 | Clytia hemisphaerica | exon |
| TCONS_00056286-exon-scaffold_271-1491911889:80215..80344 | TCONS_00056286-exon-scaffold_271-1491911889:80215..80344 | Clytia hemisphaerica | exon |
| TCONS_00056286-exon-scaffold_271-1510915933:80215..80344 | TCONS_00056286-exon-scaffold_271-1510915933:80215..80344 | Clytia hemisphaerica | exon |
| TCONS_00056286-exon-scaffold_271-1575043694:80215..80344 | TCONS_00056286-exon-scaffold_271-1575043694:80215..80344 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_271 | supercontig | scaffold_271:79361..80344 + |
Blast
The following BLAST results are available for this feature:
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