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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056297 ID=TCONS_00056297|Name=TCONS_00056297|organism=Clytia hemisphaerica|type=transcript|length=1047bp
caccgtctggatactAAAATTTCTATTCAAACTTCCTTCTAGATCCTGAG
AAAATTGACATAAACTGCGTGCCTCCAGCTAATGTTGTTGTCTTTTTTGT
TGATTGTATGTTTTTGGGACATCAGAGGGCATCTGAGAGGATGCACCAAA
GCCACCAAAGCAAAAGCCTACAAGACGTACATAAACCTAATCCTCAACTA
CGCATGGGCGATTTGCACTAAATCTGTAccgtcccgtccgaaatcatttt
tTGCATATATCTCATTAAGGGTAAgtgttaatgatttttttcttttttca
tcagaTACAGCTTGGTAATGGTACACTTTCTACAAAATTGCATGTTTTAA
CTGTCTATCATTAGTCCGCAATCATAAATTTTGTGTCaatttttccttgt
tttggcaatttttagcaaaaaagtgctTCAGTTTTATGGTAGCACTTTCT
TTCCAGTAAGGTATTTGACCTGGAATTTTGATTTTCCATATAGGCAATTT
ATTCAtgtgtttttctacaaaaaaagtgttttgaaaccttttttccatCT
TGCTCTAGCAGTGATTTTCTGTTTACTTCCATTTTGACACCGAAATGTGT
CTTGTCCGAAATCATTGCACATTGCCCCTATTTTAAGAGTGTTTATTGAA
GGTTTTTTAAGTTTGAGAGTAAGCTCAATCTGTATGTGTTTGAGAAACCT
GTTAAAAAGTATGATTTTACCATTAGGTTAACATTCTATAGGTCCCAGTG
CATTGGTGATTGGAAGTGACACCAAAaaatgtcccgtccgaaatcacaAT
AAGATCGACAATATTTCTGAAATTCTGCAgggtagaaagatttgaatggc
TGAATATTGTAATCTAGGATAGAGcatattttaattttaagtaaaTCTAA
GATCCAAAGCTCTTCAGATTTGATTCTAGGGGTACTAGAAAAAATGTCCC
GTCCAAAATCATTTGTCCTGTCCGAAATCATATCTTTTCAAATATGTTTC
AATTTGtaataaaataaatgtttaacATTCAGGAAGTTATTAGCAGG Run BLAST on NCBI transcript from alignment at scaffold_271:87955..89001 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056297 ID=TCONS_00056297|Name=TCONS_00056297|organism=Clytia hemisphaerica|type=transcript|length=1047bp|location=Sequence derived from alignment at scaffold_271:87955..89001 (Clytia hemisphaerica)
CCTGCTAATAACTTCCTGAATgttaaacatttattttattaCAAATTGAA
ACATATTTGAAAAGATATGATTTCGGACAGGACAAATGATTTTGGACGGG
ACATTTTTTCTAGTACCCCTAGAATCAAATCTGAAGAGCTTTGGATCTTA
GAtttacttaaaattaaaatatgCTCTATCCTAGATTACAATATTCAgcc
attcaaatctttctacccTGCAGAATTTCAGAAATATTGTCGATCTTATt
gtgatttcggacgggacatttTTTGGTGTCACTTCCAATCACCAATGCAC
TGGGACCTATAGAATGTTAACCTAATGGTAAAATCATACTTTTTAACAGG
TTTCTCAAACACATACAGATTGAGCTTACTCTCAAACTTAAAAAACCTTC
AATAAACACTCTTAAAATAGGGGCAATGTGCAATGATTTCGGACAAGACA
CATTTCGGTGTCAAAATGGAAGTAAACAGAAAATCACTGCTAGAGCAAGa
tggaaaaaaggtttcaaaacactttttttgtagaaaaacacaTGAATAAA
TTGCCTATATGGAAAATCAAAATTCCAGGTCAAATACCTTACTGGAAAGA
AAGTGCTACCATAAAACTGAagcacttttttgctaaaaattgccaaaaca
aggaaaaattGACACAAAATTTATGATTGCGGACTAATGATAGACAGTTA
AAACATGCAATTTTGTAGAAAGTGTACCATTACCAAGCTGTAtctgatga
aaaaagaaaaaaatcattaacacTTACCCTTAATGAGATATATGCAaaaa
atgatttcggacgggacggTACAGATTTAGTGCAAATCGCCCATGCGTAG
TTGAGGATTAGGTTTATGTACGTCTTGTAGGCTTTTGCTTTGGTGGCTTT
GGTGCATCCTCTCAGATGCCCTCTGATGTCCCAAAAACATACAATCAACA
AAAAAGACAACAACATTAGCTGGAGGCACGCAGTTTATGTCAATTTTCTC
AGGATCTAGAAGGAAGTTTGAATAGAAATTTTagtatccagacggtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056297-exon-scaffold_271-1491911889:87955..89001 | TCONS_00056297-exon-scaffold_271-1491911889:87955..89001 | Clytia hemisphaerica | exon |
| TCONS_00056297-exon-scaffold_271-1510915933:87955..89001 | TCONS_00056297-exon-scaffold_271-1510915933:87955..89001 | Clytia hemisphaerica | exon |
| TCONS_00056297-exon-scaffold_271-1575043694:87955..89001 | TCONS_00056297-exon-scaffold_271-1575043694:87955..89001 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_271 | supercontig | scaffold_271:87955..89001 . |
Blast
The following BLAST results are available for this feature:
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