TCONS_00056316 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056316
Unique NameTCONS_00056316
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1686

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056316 ID=TCONS_00056316|Name=TCONS_00056316|organism=Clytia hemisphaerica|type=transcript|length=1686bp
CACGGAATTATACAAATTATTATGTTCTTGATATATTCTCGATTGCTATA
AATGTTGGAACATCACAATTAAAATATTATCACctctaaaataattttga
agGGCCATTGATTGAAGAACctaaaattttcacgttttGATAATAATTCT
TGTTGAGGAATTTTACTGTACTTTTGCTCATGGGGATATGATGAAGACAT
TTTTCACAATGAGTTTGTGCTAActttattattaatttttgacAATGATT
TATCATTATGTATTTGATAGTGTTTGTGTGTCAGCTATGCTTTGTTTACT
CCAATTGGTATTCGGgcgaagaaaaacaacaaacaacaatacATCTTGAT
ACAGAAGAAGCATCCAAACCTATTTCTACGTCATCACCGATCGAATGCAT
TTTGGAATGCCAGAAAACAGTTAAAGAAAGCTATTATGTAGAAAAggaaa
atcaatgtttttgcttgaaaaatgaagatcagAAGATATTCTCGAGGAAG
AAAGCTGAAGGAATATTTTACGCTTCTAAGCGATATCGAAATTGCCAAGA
AATCAAAGATGTATGTCTCAATTGCAAGTCTGGCATTCACACAGTTGAAC
CTGAACGTGATGTATCGACCAAAGTTTTTTGTGATATTGATACAATTAAA
GGTAccaaatacacctttttgatCAACGGTAAACATCACCCATCATTGAA
ACTTATGGGCCAATGGGAAGGTTTTCCTCAAACTTATGGTGTTGGAAAAA
CATATGTCGGGGATGTTCAAGATGAGGTGTTCAGAACAAATGAAATCATC
ACCTGGGAAAATACTGCAGGACGAAGTGGTAGTACACAATGGTTAGGATT
CAGCTCTAGTGTTTTCGCCAATAAACAACTGCATATTGAATTCTGGATTA
AGTTTGTGGCATCCGTTCCAAACCGGTCTAATAATTTTGGGATGAAGGTC
TATGATGTGATTTATAATTCGTGGGTCGATGATTGCCAAAAAGATGAGTG
GTGCAAAGTATCTTTGAATGTCAAGAATCGCAGCTCTGGAGATGGCTTTC
ATGTCATTTTGATCTTTGATTCCATCAATCGAAGACAAGTCGTTCGAATT
ACACATTTCACACTAaccattttgaaataaaaatgttatGCAATCTTGCA
AATGGAGGATACAAGTTGTTTAGCCCCAAGTTTGGTATCCAGAGACACTT
GCaccaatttttgattttactaaTGGACGTGATAAAAAAGTGAACTAAGA
GACTGGGTTTGAGTATTGTGTAGCCCCTTAATGGTATTTTTTAATGTGTC
ATGTCCCTCTGTCTCTCTAGTAGTCACAAAAGTCACACATCGATACTTTA
GCCCATGTAAAGATACAAAATGTTTTATTAGAATCAAAAGAGCACGGAAA
TTCACAATATTTTAACACGATCTGTACCAACCTGTAGTGGAGGAATCAAA
AGGCCGTCTAACATTTGATACAAAAACCTTTTTCCTGTATTTTGGGGCCC
TTTCAATAGCCTGTTACCGACTACAAGTTTTCTGCTGGCTATAAAAAGGT
CTTTAAAATGTTATCCAAAACTTTGATTTTAGAGTCCCCATTCTGTATTA
GATTTTTACTCTGATGATGACCTCTTGTGAGTGAGGTCGAATatatagtt
taaaaaaaaaacaaaaaacaattataaaaAGGAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_272:185120..199140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056316 ID=TCONS_00056316|Name=TCONS_00056316|organism=Clytia hemisphaerica|type=transcript|length=14021bp|location=Sequence derived from alignment at scaffold_272:185120..199140+ (Clytia hemisphaerica)
CACGGAATTATACAAATTATTATGTTCTTGATATATTCTCGATTGCTATA
AATGTTGGAACATCACAATTAAAATATTATCACctctaaaataattttga
agGGCCATTGATTGAAGAACctaaaattttcacgttttGATAATAATTCT
TGTTGAGGAATTTTACTGTACTTTTGCTCATGGGGATATGATGAAGACAT
TTTTCACAATGAGTTTGTGCTAActttattattaatttttgacAATGATT
TATCATTATGTATTTGATAGTGTTTGTGTGTCAGCTATGCTTTGTTTACT
CCAATTGGTATTCGGgcgaagaaaaacaacaaacaacaatacATCTTGAT
ACAGAAGAAGCATCCAAACCTATTTCTACGTCATCACCGATCGAATGCAT
TTTGGAATGCCAGAAAACAGTTAAAGAAAGCTATTATGTAGAAAAggaaa
atcaatgtttttgcttgaaaaatgaagatcagAAGATATTCTCGAGGAAG
AAAGCTGAAGGAATATTTTACGCTTCTAAGGTAACtatcctggggggggg
ggggttttgggAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggtatttaggaaaat
ggagggtacggtatgtgccgcccttaagggtattttttttggactaagtc
ccgctaagggtcggaaaaatcagaaaatctaatttcagtctTACTAAGGG
TCGGAGTAAAATTCGaaagaaagatcgaaatttggtcaaaattggtcaaa
tttgtcccaataagggtcgtaaaattcacaacacgtttctttgttttctc
atttttagtcccggtaagggtctaAAGGTCGAAGATCGGGCggcagcccc
ccccccccccccccccccgggggaaccattttttttaaatttaattttgg
gtttctattttttttttctttttatgtccGTAATGGGTTTAAAGGCGCAA
GAGCGGGGggccgcccccccccccccgtcagctcgcaaccctagtccccc
ccccccccccgtcagctcgaaACTCTAGTACCTCCCCCCTGGGGGTAACT
ATATGTCTGAAATTCTACTGTGAGTATCTATGTTTATTTCAGTTTAGCTT
TTTCTGTTCTGAAATTTAACCTGTGAGGACAGATCATAACAATTTTTTGT
ATCACGCATATCTCTCACAtatttagtctgaatcgcagacttctatataa
tatatatatatttcctatataagaaacttttttcgctagaggatgaacAG
AAGCAGGAGAAGCCTATCATATATTgggcttttttttaatacaagcAATG
AGAATCTTTTGCGCTGTCTGTCAGCAATAAAAATAGATTATGAgggaatt
ttgataaaatacttCGAAAAGCTCTTAGATCAAGAGCTTGCATTTTCATA
TCAATGAAGGGTGCCGTAGGGTAGGCTTGGGTAGGGTAGATTATTTTTTA
GCAGATCTTTATTGTCTCTTTTGTGCTCAAATGACTTGAAAGTTTTCtat
gcattttttttcaaatttaaggtCTCTagacatacccaatttttcgattt
taccccaacttaaatggcagtttaaattcattttttcaaaagcagtttgt
tcttaaacatgtcaaagaagcgaaaataTAAGGTTTtatccacagatatc
tgtaaagcccgaagggctagataagcAACTTTAAGccttctccagcaaaa
aaaagtgaagcaaaaatttgactttttgaatttcgtgccaatggatagga
tctagcattttaattgttttcggagcgcgagataaaaaaaagtaggcggc
aaacgctatttcacatctctcaaaccggtgaaattgcatattttagtcac
gtgactttggtaggaaatccttccaaacatAGGCTTCACTTTtggataaa
agccgcaaatctagcccttcgggctttacagatctgtggtttTATCTTcc
aattctgaaattgatttttcactatgaccagagtCAGAGCCCTtagggag
cggtcataaagtatctactagaggggggtggaggatattttgaaaaatcc
aaaaaaaatttcgcaccccctcccctaacctggaaaaaatttttacgcga
aaaagaattcatccagatgcggtacaaagagtattatttgtttgtatgtC
AAAATAAGGTAAGGGAGATAGTTTAGCCCTGTTAAGTTAAAGTATAACAG
GGTTAAGACAATAATCATCAAGTGGTTTTCTCTGAGCttctgtaaaattt
ggaaaaaaatacggcttattttccccagtagtgacctggcttaattttct
gggggtgcaaactatgaaattggcgcccctggtattttttgtccttactC
GCGCCCTCCATTATTAAGTGAAACTAGAAACTGTAAGCAGTATGGTTGAA
AGgaacgcccggaatctttgacttgagtcaagaaacttggaatttgtttt
ttgtaatttgaaatgttaagGTGTTTTGGCATTAGCAGatgctaaggagg
cgcaaccatggtttgtgcCGACAagcgaaaatttcaatatttttcaccac
cattttagctaaaagacactttgttttgacaaatttcttttaagaagtac
tttttcaaaccactctgatgagctgtgagagccactaatctacttccctc
aCCTAGCTCAATGTTAAAAACCAAAAGGGCAAGgtgatgatgcccaaata
atgcCAATATGAAATGTACATATATGCAATAAGATAAATTATGAGTTGTC
GGCCGTAAGGccgaaaaattttggaaatcttcaaacgtaaaactatgaaa
ttagacttcctacattttctcttgagtttCCCAAAAAGAAATTGGAACAC
CCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCAATACGTGAATCACGCAATCTTTTTTTGCGTGAATGtatgaaa
tttctatttttacccTCAAATAAGCGTATGTAAATTTTCCGAATTTTTCC
TATTCCTAAGTTCTTCAACAATGGCATTCATGGTAgtgaaaactattttt
gaagGATTGATTCAAAAATAcacattttctttcatttctccTTTCCTCTA
GAgtatacaataaaaacattatGTGTGATTTTTCAGCTCTCATTTTATAC
ACTAAAATCCATTCGCTCTAGGTGTGCACTTATCTAAGTTTGCCATTTTT
TGACCAATGCTACTATCATTAAATTTATTAtgtaccgttgaaaagataat
tcagatcACTATaatttcatagaaaaataatgtttttccattcatgtttt
tttgtttttgttttttcatcaGCGATATCGAAATTGCCAAGAAATCAAAG
ATGTATGTCTCAATTGCAAGTCTGGCATTCACACAGTTGAACCTGAACGT
GATGTATCGACCAAAGTTTTTTGTGATATTGATACAATTAAAGGTAAAAC
AAAAGTACAACTCCGGTGAAACCCACTTCAAAAAGTCAGAGATAGATTCA
AATTAGTTGATCATCGGATCTTTAGCCTATCACTGGATCTTTAGATCATT
CCTTATATAGGAACATTAGCCTAAAAGCTAGAAAACTGTCAATGTCTTTC
AAAATGTCTTATGTAGTTTATGCCAAACTTTGACTTAAAGCGCATGCGTA
AGGGCATTATGTTCTAGAGGAAATAACTATTTTTAGTTTACCTTTGTTTG
AGTTTTCTTTTCTCGATAATAGTCTAAAGAACCGATCCGGCTTAAAGAAA
CGATGATTTGCTTATTAGATCTTTTCCCTGACTTTCAATCACCCAAACTA
CTCTTTTAGGTGTAAAAACTTTcccgagcagaaactttcacgaaaaataa
caaaatttacgACATTCTCGTATAACTCCAAATAGGACATAAGTTTGAtg
aggaaaatttaaaaagtcaaaaaaaaaatttactataACTGGCagttttg
aaatctacatccttatacgcttcttttgacgtAAAAATGACCATGACTAA
GGCCCTAAATTTTCTGCACCAAACTTATGTCCTTTTTGTACATGCCACAC
GAGTTtattactttcgcgaattattCGAATTATTTGCGAATATTTTAAAC
ATCTTTTTTACGAACCATCTTAACTGTGACACGAATTTTAGTTTAGTAAA
AAACGCCTTTCATGGCATTTTCCAAACTCTCAAAACCAACTCTCTTTATC
GCTGTTTAGGcctaaaaaaggcaaaaacctCTTCACAGAAACCAGTTGGA
ATCTTCCCATTAGGGGATGTTCGCATCTATCTCTCAAAGCTTCTAATTAT
CACGAGAAACACTAGAAGTTAAGCTAGGTTAATGAacatgatgatttttt
ttactcAGGTAccaaatacacctttttgatCAACGGTAAACGTCACCCAT
CATTGAAACTTATGGACAAATGGGAAGGTTTTCCTCAAACTTATGGTGTT
GGAAAAACATATGTTGGAGATGTTCAAGATGAGGTGTTCAGAGCAAATGA
AATCATCACCTGGGAAAATACTGCAGGACGAAGTGGACCATATCAATGGT
TAGGATTCAGCTCTAGTGTTTTCGCCAATAAACAACTGCATATTGAATTC
TGGATTAAGTTTGTGGCATCTGTTCCAAACCGTTCTAACAATTTTGGGAT
GAAAGTCTATGGTGTGGTTTATAATTCGTGGGTTGATGATTGTCAAAAAG
ATGAGTGGTGCAAAGTATCTTTGAATATCAAGTGTCGCAGCAATGGCTAT
TATGTCATTTTGATCTTTGATTCCATCAATCGAAGACAAGTCGTTCGAAT
TACACATTTCACACTAaccattttgaaataaaaatgttatGCAATCATTG
CAAATGGAGGATACAAGATGTTTAGCCCAAAGGTTGGTATCCAGAGACAC
TTACaccaatttttgattttactaaTGGACGTGATATAATCCATCACAAA
TAAGTGAACTAAGGGACTGTGTTTGAGTATTGTGTAACCCCTTAATGGTC
ATTTTTAATGTTTCATGTCCCTCTTTCTCTCTAGCTGTCGTAAAAGTCAT
GCATCGATATTACAGCCTATGTAAAGATACAAAAtgttcatagcgacagc
tacaTTCCCGGGGGGGGAGGTTACCCAAGATAAGCGGCCTAAAGTACGTC
CAACCTTCTCAAAGTGCACTGTCACTGTCAAAATGAGCAAGGCGGGTAAG
AAATAGTGCACTATGAGGGTGTAAAATCTTTAAATtgtgaccatattttg
cctagAAATAGTCAAAATTTGCCGAAAAACACGCGTAAGatcgttttttt
ttctcttaaatttactcaaatttggatAAATTTTCCCTGCATTTTAAaag
tccgatttcaaaggcctaattttgggctgcaagtaaaatttttttttatt
atttcaaaataattatttaatatATGATTAAGGTATGTATGACATATCTG
AAAGCCAGTAATATTTTTTATCTAATGGTAATAATTTCggttaaatttta
aaaacttaaacaggatataaataaaatctttagaattttaacattaccta
cttcaaagaagttgaAGCCACccattgcttttgaattttgaaagaataAT
TTCGGTACTCTGTTCCCAATGGATTGAACTAGAAAAGCTTCTTGGGATTT
TTCTTTAGAATCTCTTAAACTCATAATCTTAGTTTTTGTACAAATATTga
gaaaaaagttaatttttttcagttatctctAAATTGAGGATGAAAAACTC
GATTAGATATAAAATCCaaagacactttttaagttttttctttGGGGAAT
CAGGTTTAATAACTACGAATCCCGTTTCCAGAAATGCAGTTCGGGTGAAA
CAACGCCTCAATTGTTATTTCACCCTCACTTTCTCCTAGGCTTGATATcc
atttcaccgtctagttttttaatattttgtctctTTGTCCTTTTTCCATC
tagaatttgattttcaatagATTTGTATTGcagtttttttatctttttat
taatTCTCCATTATTTAATAATTTAGCTTTTATTTAATTGTATATTAATT
GCCGTAATTTTTAATATTAACTTTTAACGATCattttaactttaattttc
aattcatttttaatTATGTATAGCCGATGTAAATAAAAACCTtgtcaaaa
aattcatttttatgttgaaaaaggCCTGTAAGGCCGAAATATTTATGAAA
AGTTGTAACAACACTCAATGAAAACAAGAAACATTGGCTCTATATTGACT
TCTAATATCATAGATAATACTAGTAGGGACCTTTAGCATCTAGGAATTTG
AAAAAGTACGACAGGATTGAACAAAAAAAGCCCTTGGGGATTGATATTGG
GATTCTTTTCATGTCAATTTTCTCATGAGAATAGTGAATTTTCATAGGGT
AATTAATAGACGTTTTCAAAAAGGTTCCAAGGGTAgagtttttaactctg
agttttaacgctagactaggaccttaggatctgaggatccaaaagttcaa
aaatgatccagtagggcttgaaatatagcctagaaaccaataaatctctc
acagatcgaaataatcgatgaaatcaagttgaaggcctaaaaattgacat
tcttgctcgaacttcaattttcaaaaaatggtaaattagccaaaagtgcc
aatatattatggcactgattgtagctaAGCACTTGCTTTTTTATGTCTTC
TTCTTTGATATTTCTCTTAGACGAGCTCCGCTTTCTTGGAAAGCTTTTCA
AACGAAATAATAACAAGTGCACAAGGTGATTACTGATCCAACGATGATTA
AGAGACTTCAAAGATACTAAATCATTGTCCAAAACACAAACATGATTACT
TATCGGGGAGAAAAATGTCAGGGAAAAAAAACCTGATGACAGATTGCGTA
TTTTCTGGTCCAGTACGCTGAAGTTCTAAAGACGTGGGCGAAAATATACA
GTTTTTagcgatctttagagcttcagcgtgtcgctttaagaaaactccac
agctgctatcaggttaggggaagtgacgaaaattttgagggggtgacaaA
ATTTTCCCCTGACAAATTTTCCCCCGATATCTTATCACCCTACCAAAATT
TTTACCGggtttttttatccccgacgaAAAactttttcgtgatttttacc
CCTgcccaaaacttttacccagtTTTTTAATCCCTGACCAATATTATCCC
cgattaattttattttattttaacagaaacaagacgacttgaagtcgtaa
atttcgcctaaagtttaaactgtatgggaaaaacaagaagtagagatgga
agctaatctgaaatctactttacatcgagccttgatgaaacaattttata
agaacaacgaggctcaaagtagctaaaaaaataagaccaatttaagaaca
atggttgtttaattcttaagaaTAAATAACTGAAGGGTATCGATGGTCGC
Gatggtatatcaccgtctatcaagagttattgatttgattctcataaagt
atatgcttataagaaagataaatatgctcatattgtgtgccattgcttgt
ttactttgtaaaaactaattaccgaaagttatatcaccatctatcaagag
atattgttttattcttataaagtatatgcttataagaaaataaagaaaaa
atccaatcTGTGAAGCTagagacacaaagatatatgacggaatccaaaga
aaactcgcgaaaatcgtccgtggttatacgagcgtgcaATTTGTAAATCA
AATTtggtgagttcgtccaccgtatcgagtacttcgtaatcgttttctaa
tttttttcctcACCGCCGGCGCCGCCACCGCAGAATACTGACTGTAATAC
TTTCACTATGGCGAAATTAAAAAGGATTTATACTGTAGTTTTCCATTGTA
AACGTTTCCAGGGATGTTTCTTAACAGACAAATAGAATGACTTTCTTTTC
AAACGAGTTCTTTTGCCTAATAAACACAACAAGCAAAGTTAAAACTACaa
tggtttgataaaaaataacaatagtaACACAATGTTATTAGTTTCGGCGT
TTCTTATCAAATATTTCCCTATtataggggaatatttgttaataccgtaa
tttttcttctccaagtctaacgccggttttggtcaatttcgtgagtttat
tgtgcatgagtctctttttaaatcaagctccggcggtaaaaacagtagaa
tgttctttttttgaggcggaagacgtcattttttcGAGAAACGTCCGTGG
AAAATATGCATACGGCACTCTATTTTCCTTACCGATGGGGCAACGAAGCC
GgtttcggaagcgtattgttgatcggaccatactgctttgatTCTAAccg
tcaaaacaaagatggcagcaAAAAATagcagccaattcgattgacttcaa
aatatgccgTTTTTACCCTGAttgccaaatattttgcattcgttgacaaa
aatttggcaaatgtggcaaaatttgagtgccataaatgccaaattaaaaa
gatgtggtgaatctggcattcttggcgtttttggaacttacctccatacg
tGTCCATCAcatgaagctgtgatcttttgattgaaattgtggatttggca
aagttggtgagtatggcaaatttggaagtcaatcgaattggctgtagaca
acaacttttgctctttcgctatttttttttggtttttatgctttaatgag
ttgaattggatcatgatttttgtacgattatCACAAGGAATGATCGATGA
TGAACGTTGTTTATCATtccttcctggatttgatgttttgtttacattct
gttggtttggaatgagagatacaatctcttggtcttggtcttggaaaaac
aggacattttgtcaactttcacaacaaactaacttcaattttgcttgtaa
atttacataaattgtaagaaggcaagtgactgtgaaaAATCTGACCATGG
TATACCTGAAAAATTTCATGcttgcaacatcaaaaaagtttgcacccaat
CAATGTGACAATGCAAcaatggttgatgaactgattagctaaaaatttaa
acatggagcaaaattgactggttaatgattgaatttcccttggtcttttt
atctacaacaatgaattaactggttAGTGATAGTTAGTGAAAACTCTTTG
TCCCGTGGGGAGAATAATTCTGTTGCTGTTAATTTCctgaatttcaaact
ttttttaagctGATANaacagttagtgaaaactcttTGTGGGAAGAATAA
TTCTGTTGCagttaatttcaaactttttttaagctGATAAAGCGGAACAC
CACggccaatatgaagaatgttaacttctgaaattgtttatttcattgaa
tatggatgtaatcaattgaaatcacctcacatgtacaattaaaatttttc
ttgaacttggagatttttttCCTCGCGTGCATTTAAAACCTGGAAAACTT
TAGTCGTGAATTTATTTGGAGATCTTTTTCCGCGttcattttaaacgtgg
aaacttgtgttttgaatttggagattttcttatgtgcatttaaaacgtgg
aaagcttttgtcgtgaacttgatattttcttccacatatgcatttaaaaa
atgaagaaaactcaagtgatttcctggcatgacaactttttttctttcct
gacatttttttggaaattatgattgtttccaagtatggtatgtgatattg
tttgcttttgcagcatgcttttggaaatcataaaatggcttctgttaggg
ggAATTctttcctatcgacattctttcagattatgaaaatgtttcccagt
aaataaaaatgagatttttttctcaaaacctgAAATACTGGCAATTACAt
aaatacatttttgaaattcttaagggcttgtgttgcttgatgttatctga
gatttaaagcactttgaaatcttttgagtacatcaattattttatcattt
gtaaaggaaatatttatctccatctttgcggctcttgtttgtATTTATGG
AATTCATAATATTTCATGGAATATTTATAAAACTGATGCATAGCCCATAT
ATTCAAGCATGAATAAAAAAAGGAGATTTATTCTCAGAAAGAGCTCTGat
taaaatcatcaaagatGGTAAAGTAATCACCTTTtacaaacatttcaaaa
tatattcttTGTTTGAATTTTCGGTGTTACTTTACacggaatttttcaaa
ttattatgTTCTTGATATATTCTCAATTGCTATAGTAAATGTTAGTTCAT
CACAATTAAATATTATCACCTCTAAAATAAATTTGACGAACCATTGATTG
AGGAACCTAAAATGTTCAAGTTTTTGTTATTCTCGTCGAGGATTTTTACT
GTACTTTTGCTTATTGGGATATGGTGAAGACATATTTCACAATGAGTTTG
TACTAACTTTAATAATATCAATTTTTGACACTGATTTATCATTATGCATT
TGATAGTGTTTGTGTGTCAGCATTGCTTTGTTTACTCAAATTGGTATTTG
GgcgaagaaaaacaacaaacaacaacacaTATTGATACAGAAGAAGCATC
CAAACCTATTTCCACTCCATCATCAATCGAATGCATCTTGGAAtgcaaaa
aaacaatgaaaggaAGCTATTATGTCGAAAAggaaaatcaatgtttttgc
ttgaaaaataaagatcagaAGATATTCTCGAAGAAGAAATCTGAAGGAAT
ATTTAAAAGTTCTAAGGTAACTATATGTCTAAAATTCTACTGTCAGTATC
TCTGACTATCTCAGTTTAGCTTTTTCTGTTCTGAAATTTAACCTGTGAGG
ACAGATTTTTTGTATCGCGCATGTCTCTCACAtatttagtctgaatcgca
gacttctatatatactatatatatttcctatataagaaaattttttcgct
agaggatgagcagaagcagGAGAAGCCTATCATATATTgggctttttttt
taatacaagcAATGAGAATCTTTTGCGCTGTCTGTCAGCAATAAAAAACA
GATTATGAggtaattttgataaaatacttCGAAACAGTCTTAGCTAGAGA
GCTTGCATTTTCATATCAATAAAGGGTGCCGTAGGGTAGGGCTTGGGTAG
GGTAGATTATATTTAGCAGATCCTTATTGTCTCTTTTGTGCTCAAATGAC
TTGAAAGTATTctatacatttttttcaaatttaatcacGTCAATACGTGA
ATCTTGCAATCTTTTTTTGCGTGAATGtatgaaatttctatttttacccT
CAAATAAGCGTATGCAAATTTCCCAATTTTTCCTATTCCCAAGTTCTTCA
ACAATGACATTCATGGTactgaaatctatttttaaagGATTGATTCAAAA
ATACACATCCCTGCCTTTTCTCTAGAgtatagaataaaaacattatGTGT
TATTTTTCAGCTCTTATTTTATACACTAAAATCCATTCGCTCTAGGTGTG
CACTTATCTAAGTTTGCCATTTTTTGACCAATgttaccatagtataagaa
agccgcggctttttTATACTATGATGCTTTTTATACTATGATGCTACTTG
TTTTTTCATTAGCGATATCGAAATTGCCAAGAAATCAAGGATGTATGTCT
CAATTGCAAGTCTGGCATTCACACAATTCAACCTGAACGTGATGTATCGA
CCAAAGTTTTTTGTGATATTGATACAATTAAAGGTAAAACAAAAGTACAA
CTCCCATGAAACGCACTTCGAACAGTCAGAGATAGATTCAAATTAGCTGA
TCATCGGATCTTTAGCCTATCACTGGATCTTTAGACCATGTTATATAGGA
AAAATCAGCCTAAAAGCTAGAAAACTAAATCAGGCGGTGGTGTAATTAGG
GCCGacgtaaaaggggccggcgttaaatcagggccggtgttaaaagggcc
gataaggtaactATTTTTAGTTTTCCTTTGATTGAGTTTTCTTTTCTCGA
TTATAGTCGAGAAAAGAACCGATTCGGCTTAAAAAAACGATGATTTGCTT
ATTTGATCTTTTCCCTGACTTTCAATCACTCAAACTACTTTTTTAGGCgt
aaaaactttcgcgagcaggaACTTTCACGAAACATCGCGATATATTTACG
ACATTCTTGTGTAACTCCAAATAGGACATAAGTTTGGCgaggaaaattaa
aaaagccaAGAAAATAATCTTACTAACATGCAGAAATCTACCTCCTTATC
CTACGTTTCTTTTGACGAAAAAATGACTATGACTAAGGCCCCAAGTTCTC
TACGCCAAATATATGTCCATTTTGGACATGCTACTTACACGAGTTTACTT
AGAATTATCGAAGTATTTAAACATCTTTTTGTGAACCATCATAACTATGA
CATGACTTTTAGTTTAGTTAAATtgctaattaaaaaaaaatttcatgtca
ttttCCCAACAACTCTCAATACCAACTCTCTTTACCGCTTCTTGGCCTAA
AAAAACCAGTTGGAATCTTCCCATCAGGGGATGTTCGCATTTATCTCTCA
AAGCTTCTAATTATCACGAGAAACACTAGAGGTGATCGTTAAGCTAGGTG
TAAATGAAGatgatgatttatttttttgtcatacAGGTAccaaatacacc
tttttgatCAACGGTAAACATCACCCATCATTGAAACTTATGGGCCAATG
GGAAGGTTTTCCTCAAACTTATGGTGTTGGAAAAACATATGTCGGGGATG
TTCAAGATGAGGTGTTCAGAACAAATGAAATCATCACCTGGGAAAATACT
GCAGGACGAAGTGGTAGTACACAATGGTTAGGATTCAGCTCTAGTGTTTT
CGCCAATAAACAACTGCATATTGAATTCTGGATTAAGTTTGTGGCATCCG
TTCCAAACCGGTCTAATAATTTTGGGATGAAGGTCTATGATGTGATTTAT
AATTCGTGGGTCGATGATTGCCAAAAAGATGAGTGGTGCAAAGTATCTTT
GAATGTCAAGAATCGCAGCTCTGGAGATGGCTTTCATGTCATTTTGATCT
TTGATTCCATCAATCGAAGACAAGTCGTTCGAATTACACATTTCACACTA
accattttgaaataaaaatgttatGCAATCTTGCAAATGGAGGATACAAG
TTGTTTAGCCCCAAGTTTGGTATCCAGAGACACTTGCaccaatttttgat
tttactaaTGGACGTGATAAAAAAGTGAACTAAGAGACTGGGTTTGAGTA
TTGTGTAGCCCCTTAATGGTATTTTTTAATGTGTCATGTCCCTCTGTCTC
TCTAGTAGTCACAAAAGTCACACATCGATACTTTAGCCCATGTAAAGATA
CAAAATGTTTTATTAGAATCAAAAGAGCACGGAAATTCACAATATTTTAA
CACGATCTGTACCAACCTGTAGTGGAGGAATCAAAAGGCCGTCTAACATT
TGATACAAAAACCTTTTTCCTGTATTTTGGGGCCCTTTCAATAGCCTGTT
ACCGACTACAAGTTTTCTGCTGGCTATAAAAAGGTCTTTAAAATGTTATC
CAAAACTTTGATTTTAGAGTCCCCATTCTGTATTAGATTTTTACTCTGAT
GATGACCTCTTGTGAGTGAGGTCGAATatatagtttaaaaaaaaaacaaa
aaacaattataaaaAGGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035478XLOC_035478Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056316-exon-scaffold_272-1491911889:185120..185649TCONS_00056316-exon-scaffold_272-1491911889:185120..185649Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1510915933:185120..185649TCONS_00056316-exon-scaffold_272-1510915933:185120..185649Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1575043694:185120..185649TCONS_00056316-exon-scaffold_272-1575043694:185120..185649Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1491911889:188842..188962TCONS_00056316-exon-scaffold_272-1491911889:188842..188962Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1510915933:188842..188962TCONS_00056316-exon-scaffold_272-1510915933:188842..188962Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1575043694:188842..188962TCONS_00056316-exon-scaffold_272-1575043694:188842..188962Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1491911889:198106..199140TCONS_00056316-exon-scaffold_272-1491911889:198106..199140Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1510915933:198106..199140TCONS_00056316-exon-scaffold_272-1510915933:198106..199140Clytia hemisphaericaexon
TCONS_00056316-exon-scaffold_272-1575043694:198106..199140TCONS_00056316-exon-scaffold_272-1575043694:198106..199140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_272supercontigscaffold_272:185120..199140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.0985486	0	0.0583836	0	0	0	0	0	0	0	0	0	0.264853	0.362041	0.234297	0.130302	0	0.132602	1.34896	1.3255	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056316 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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