TCONS_00056325 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056325
Unique NameTCONS_00056325
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1429

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056325 ID=TCONS_00056325|Name=TCONS_00056325|organism=Clytia hemisphaerica|type=transcript|length=1429bp
GATTCCAGAGACAAATATAGCGGCAAAGCAGTTGATGTTTGGGCAATGGG
GATaacattattttgttttctttacgGCAAGTGTCCATTCTACAGTTCAT
TGATGGGCGAACTcatcactaaaatcaaatcgGAGCCACTGGTGTTTCCA
GAAAGTCCCATCGTCAACCCACAAGCCAAAGATCTGATATCAAGGATGTT
GGCGAAAGATCCTAAAGAAAGAATAACCGTTCTTGAAATGAAGGAGCATC
ACTGGGTAACAGATGGTGGTCGTGTTACATTAGCAGCAACCGAAGATCAT
TGTACTGTTATTGAAGTCACTGATGAAGAAGTCAAAAATAGCGTTAAAAT
TATCTCCAAACTTTCAAGTCTCgtATTCGCAAAATCCATATTAAAAGGTC
GATCTTTCGTCCCTGGCagaggaaagaaaaacaaatggaAGAGAAATCAC
TCCTTACCAACCCCTAATTTATGATAATTCAtgttaatttattttcaaat
cattaACCATGTACGCACTTCATGGTTTCGTTGCGTTGGAAAAACCAAAC
GAAGCTATCTTATCGGTCTAtctaaagggataatcagatggtttgtaata
ttttgcatgtgggatccttctattgtcctgagcaaaatctcaaaatattt
ttgccttactattttccaaagtcgagatatttaagttacaaggttttggc
ttttaggatgaaaacaatagaatttcaacgtaagaacccattttcaaaaa
tttcaaattttgatatcttgattttagaaaattgttacacaaaaTACTTT
GGGGTTTTACTCAGGACCGTAGAAGGTTTCTACTACAggtcaaatatctc
aaaccatctgattatctctTTAAGGAGTAACGCCATTTTAAGCCAATAGA
ATGAGTTTCGTTTCTTTTCGTGGAACAAAACGGCACGTAATACATGGGAA
CATAGACTTGATAACAAGGCCTGGTACTTTAAGTATTTCTAACgtttttt
taacgttttgagGTGAAAATGGTGCGTAAAGGTATCTTTGTCACATTGGT
CATTGACAACTGCTGGAACataacgttgttttgacgttcatCTGGCGTAT
GCTATGGACGTTGACAATTTGACCTAGCCAGTACTTAAGAGACCAGGAAA
CACAAAATCTTTAAAGGTAGACTAAAGATATAAACAAATTTAGACAAAAG
TAAAACCATTCTTAAACATTTGGTTCAATTGGCTCCAAAGAAATAATTAT
CTTCATTGGTCAAAACTCCATTGCATTTTTATGTACATACTAATGTTTTT
GTCGAATATATTTTTATGTAAATATTCTACTATTTTGATACTTCCCTCTA
TATATGAattgttgtttttaaaattttattagatAAAGTATCATttacaa
aatgaagaaaatactttttttaattttgc
Run BLAST on NCBI

protein sequence of TCONS_00056325-protein

>TCONS_00056325-protein ID=TCONS_00056325-protein|Name=TCONS_00056325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=157bp
DSRDKYSGKAVDVWAMGITLFCFLYGKCPFYSSLMGELITKIKSEPLVFP
ESPIVNPQAKDLISRMLAKDPKERITVLEMKEHHWVTDGGRVTLAATEDH
CTVIEVTDEEVKNSVKIISKLSSLVFAKSILKGRSFVPGRGKKNKWKRNH
SLPTPNL
Run BLAST on NCBI

transcript from alignment at scaffold_272:307634..316604+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056325 ID=TCONS_00056325|Name=TCONS_00056325|organism=Clytia hemisphaerica|type=transcript|length=8971bp|location=Sequence derived from alignment at scaffold_272:307634..316604+ (Clytia hemisphaerica)
GATTCCAGAGACAAATATAGCGGCAAAGCAGTTGATGTTTGGGCAATGGG GATaacattattttgttttctttacgGCAAGGTATATATCATGTTCGTTT TAGTCTTACTACTACTTAATGTGGTTTTGTGcgttacatttttcaaattg tgGCAGGTAAATGTTATACTTCCAATCCTACATAAGAGATAAGACCTTAT TTGGAAAAATCATCTTGTGCGCAGCTCCTTGACTAAACTAGTATATGTAT ATGAATAAATTGCTATAAATTGATCCAATttgcaagttgcaagcaaaata ttcatGAGGCTGTGCACTTGATTTGTAAGtaaagtaccttatcggggaaa acttcgtcggggaaaaattcgtcacttgctggtagttggtaaacgcatta agacCAGgggaaattttcgtcggggaaaatattcgtcacttgtccaaaat ttcgtcatttttccccgacgaagttttcctcGATAAGGTATACGGTGTGT TCTTTAAACTGGTGATTGGTTCATTCTTTCAGTGTCCATTCTACAGTTCA TTGATGGGCGAACTcatcactaaaatcaaatcgGAGCCGTAAGTTTATGG GgttaaactttgttttgataggCTTACGAAAGACTAGACAGCGAATTCTT AGCAAATTCAACAATTTAATCATTACTCAATATCAATTATTTGATATTTC CATTTTTATCTACCAAAACGTGAAATTGTCTAACTTATGGTTCAGCTTCA TTCAATATACCAATATTAGTTAtatcaaagatttattatacactggataa acgactcataaaacgatggagagcgaccattgtatttcctttgtttcaga aaacaattgatgttctagctttgtccgcaaaggacaactgtcatggcggc tcgaagatttctaattttttaaaatgtttatcagacttatttttaaaaag ttctctagctctttctttttgtacatttgctgaaaaaaagtttgaaagta aggctagcattccaagctggatacatttgtaaaatctaatgtgagaaaaa catcattagacaataaattcagacaaaatgcttatagtgacacgaaatct TTAATGGGAAATAtatttccaagactgtccccagaagagctgaaattaac atacataagacttgagtgtcttgactccactgtggtatgaaaatcttttg gaggcacgtggtggcaaggtggtttttttgaggttgaagtttgaaaattt ccggtgtcaacattaaatttcttatacNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNGTTATATCAAATCTCTACTTCTTTATTTTAGACT GGTGTTTCCAGAAAGTCCCATCGTCAACCCACAAGCCAAAGATCTGATAT CAAGGATGTTGGCGAAAGATCCTAAAGAAAGAATAACCGTTCTTGAAATG AAGGTATTCTTATCATGTTTGTCTTGTACTAATCAATTTTTTATGCGTTC AAACTTAAACTTAATGAACAACCAAGGAAAGCTAATttgtcaaaattaca aaatttgcaacgcgaaatgaattttaaaatttgaagacaTAACAGCCAAA CAGTCACAAATGCTTCTTGAATTTGATTAAAACTgctttttcttaacttt tttgaatacttcgccaccattttagtttagtgtttatccagagtctcttt CATAATTCCATACTATAGTAACCAACTTCGAGTTACTCACCCTTTCAGGA GCATCACTGGGTAACAGATGGTGGTCGTGTTACATTAGCAGCAACCGAAG ATCATTGTACTGTTATTGAAGTCACTGATGAAGAAGTCAAAAATAGCGTT AAAATTATCTCCAAACTTTCAAGTCTCGTAAGTTAGAAATTGTATCTAAA TCAGATTAATTTTCGCAATCGACTAGGTTATTTTATTGTTatgtaaattt gtttacttgTTTGCAGAATTAGATCTCGTGAAGTAAAATACAGAAAACTT CACAATCCTTTAGctcttaaaataaaatttcgcgaaatcaGATCCGATTA AGTTTAACAGACAGCTCCTTGTCCTAAAAGTCTTGGATAATTTTTTGGTT CGGGTATTAAAGGAGATCTAACGGCAAAAATTTTGctacattttttttgg aaattatggaaACTTTATATTGTGGGGATTAAAATGAGCTATATTATGTT GAAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNaagacccggtaggattttttcaaccaGTGAGGGTGAAACTAAGGGACT GTTGGAAcatgatggggattgatattttttatgactggggacagtggcgt tgtgggaaaatttttctggaggggccaaagtcaattttttttaaatggcg cccccctcccccaattttccaaagtgatGTCCCCACCCaccattttctaa acttttactaattcatttgcctaggcataatgaggaaggaaatatttagt ggagaaTAAGAGAgtagatttatctttgatgaatggaaaagggataaaca ggccccaccatggttggggacgactgaaaaattgtttttaaatcgactgc caagaaaccctaaatcactaaataaacaaagacaaatttgacacttgcta gagtgaaaaggaacttaaagaaacaatctttaatgcgagcgaagcgagcg aaaaaattgatgttttatgatttcaatattgttgtcagcatattggtgca gttagattttcatttaataatgctatattgtacacaaaaaaaacttgtaa attagctacATTAGAAGTTACCTATtaactgtattgcgagcgaagcgagc gaaaaaaattacaagaattttaaaattatctcagtaaagtTGGTCCTCGG CGCAATTTAAGGTGcataaagtataatttttaaaattggggcgtttaaaa aaatctctattggcgccccttgctcttcagcgccccttcaaaaaagctcc gctgggggggccatggcccccctggccccccctgccacaacgccactggt aCTAAAATcttcagacatcatgacatttagtgacgtggtggtactgcaaa aaagttcaaaaataattttagtaccatgtgtactaaaataccaaaaagag tggtcccttaaagaaatttttgaaaaatcttagtattttgttctaaaatc agccaaaatggagcatttttttaacaattttggaaaaaatttgatttttt ttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccc ccccccccgtttaaaCAATGATAATTCAATCAATATGAAAGATTTAGCAC TCGTtctttttgcaatgttttttatttaattaggCCTGTACtctgtcaaa aaataaggataaagaaatttttgccgTTAGATCTCCTTTAATGAAGAAAA TTTAAGTGGTTttacttaaggccggtctccacttgcgcgcgctttgatcg tactttttcgagcaaagcttccacgctattggtcaaaagaaaaatgaagc aattccattggcgcgatctgacgtaacggttgaaaaaagttgaaatgtgt tcaattttttttttgagcgcgcgctacatttttatgacgtaatctttttt tccaagcaaaaagaattgaagccaaaatgtgcgatcgcagcgcacgcaag tggagaccggcctttatacATAATTAGAGAGAGGAATACTTTTCCATCGT GAATTATGGCtggttttctttgaaaaaaaaatttcacctgATTTTTCTTC CATGTGATTTTTTCAACGCTTTGATCACTGAGTTAGATTCTACCGGGTCA ATTCTATAGCTAAAGGGGTGGCTATTCCACTTAAATTAAGTTATgcttca tttcttttttccaggtATTCGCAAAATCCATATTAAAAGGTCGATCTTTC GTCCCTGGCagaggaaagaaaaacaaatggaAGAGAAATCACTCCTTACC AACCCCTAATTTATGATAATTCAtgttaatttattttcaaatcattaACC ATGTACGCACTTCATGGTTTCGTTGCGTTGGAAAAACCAAACGAAGCTAT CTTATCGGTCTAtctaaagggataatcagatggtttgtaatattttgcat gtgggatccttctattgtcctgagcaaaatctcaaaatatttttgcctta ctattttccaaagtcgagatatttaagttacaaggttttggcttttagga tgaaaacaatagaatttcaacgtaagaacccattttcaaaaatttcaaat tttgatatcttgattttagaaaattgttacacaaaaTACTTTGGGGTTTT ACTCAGGACCGTAGAAGGTTTCTACTACAggtcaaatatctcaaaccatc tgattatctctTTAAGGAGTAACGCCATTTTAAGCCAATAGAATGAGTTT CGTTTCTTTTCGTGGAACAAAACGGCACGTAATACATGGGAACATAGACT TGATAACAAGGCCTGGTACTTTAAGTATTTCTAACgtttttttaacgttt tgagGTGAAAATGGTGCGTAAAGGTATCTTTGTCACATTGGTCATTGACA ACTGCTGGAACataacgttgttttgacgttcatCTGGCGTATGCTATGGA CGTTGACAATTTGACCTAGCCAGTACTTAAGAGACCAGGAAACACAAAAT CTTTAAAGGTAGACTAAAGATATAAACAAATTTAGACAAAAGTAAAACCA TTCTTAAACATTTGGTTCAATTGGCTCCAAAGAAATAATTATCTTCATTG GTCAAAACTCCATTGCATTTTTATGTACATACTAATGTTTTTGTCGAATA TATTTTTATGTAAATATTCTACTATTTTGATACTTCCCTCTATATATGAa ttgttgtttttaaaattttattagatAAAGTATCATttacaaaatgaaga aaatactttttttaattttgc

Coding sequence (CDS) from alignment at scaffold_272:307634..316604+

>TCONS_00056325 ID=TCONS_00056325|Name=TCONS_00056325|organism=Clytia hemisphaerica|type=CDS|length=2370bp|location=Sequence derived from alignment at scaffold_272:307634..316604+ (Clytia hemisphaerica)
GATTCCAGAGACAAATATAGCGGCAAAGCAGTTGATGTTTGGGCAATGGG
GATaacattattttgttttctttacgGCAAGTGTCCATTCTACAGTTCAT
TGATGGGCGAACTcatcactaaaatcaaatcgGAGCCACTGGTGTTTCCA
GAAAGTCCCATCGTCAACCCACAAGCCAAAGATCTGATATCAAGGATGTT
GGCGAAAGATCCTAAAGAAAGAATAACCGTTCTTGAAATGAAGGAGCATC
ACTGGGTAACAGATGGTGGTCGTGTTACATTAGCAGCAACCGAAGATCAT
TGTACTGTTATTGAAGTCACTGATGAAGAAGTCAAAAATAGCGTTAAAAT
TATCTCCAAACTTTCAAGTCTCgtATTCGCAAAATCCATATTAAAAGGTC
GATCTTTCGTCCCTGGCagaggaaagaaaaacaaatggaAGAGAAATCAC
TCCTTACCAACCCCTAATTTATGAGATTCCAGAGACAAATATAGCGGCAA
AGCAGTTGATGTTTGGGCAATGGGGATaacattattttgttttctttacg
GCAAGTGTCCATTCTACAGTTCATTGATGGGCGAACTcatcactaaaatc
aaatcgGAGCCACTGGTGTTTCCAGAAAGTCCCATCGTCAACCCACAAGC
CAAAGATCTGATATCAAGGATGTTGGCGAAAGATCCTAAAGAAAGAATAA
CCGTTCTTGAAATGAAGGAGCATCACTGGGTAACAGATGGTGGTCGTGTT
ACATTAGCAGCAACCGAAGATCATTGTACTGTTATTGAAGTCACTGATGA
AGAAGTCAAAAATAGCGTTAAAATTATCTCCAAACTTTCAAGTCTCgtAT
TCGCAAAATCCATATTAAAAGGTCGATCTTTCGTCCCTGGCagaggaaag
aaaaacaaatggaAGAGAAATCACTCCTTACCAACCCCTAATTTATGAGA
TTCCAGAGACAAATATAGCGGCAAAGCAGTTGATGTTTGGGCAATGGGGA
TaacattattttgttttctttacgGCAAGTGTCCATTCTACAGTTCATTG
ATGGGCGAACTcatcactaaaatcaaatcgGAGCCACTGGTGTTTCCAGA
AAGTCCCATCGTCAACCCACAAGCCAAAGATCTGATATCAAGGATGTTGG
CGAAAGATCCTAAAGAAAGAATAACCGTTCTTGAAATGAAGGAGCATCAC
TGGGTAACAGATGGTGGTCGTGTTACATTAGCAGCAACCGAAGATCATTG
TACTGTTATTGAAGTCACTGATGAAGAAGTCAAAAATAGCGTTAAAATTA
TCTCCAAACTTTCAAGTCTCgtATTCGCAAAATCCATATTAAAAGGTCGA
TCTTTCGTCCCTGGCagaggaaagaaaaacaaatggaAGAGAAATCACTC
CTTACCAACCCCTAATTTATGAGATTCCAGAGACAAATATAGCGGCAAAG
CAGTTGATGTTTGGGCAATGGGGATaacattattttgttttctttacgGC
AAGTGTCCATTCTACAGTTCATTGATGGGCGAACTcatcactaaaatcaa
atcgGAGCCACTGGTGTTTCCAGAAAGTCCCATCGTCAACCCACAAGCCA
AAGATCTGATATCAAGGATGTTGGCGAAAGATCCTAAAGAAAGAATAACC
GTTCTTGAAATGAAGGAGCATCACTGGGTAACAGATGGTGGTCGTGTTAC
ATTAGCAGCAACCGAAGATCATTGTACTGTTATTGAAGTCACTGATGAAG
AAGTCAAAAATAGCGTTAAAATTATCTCCAAACTTTCAAGTCTCgtATTC
GCAAAATCCATATTAAAAGGTCGATCTTTCGTCCCTGGCagaggaaagaa
aaacaaatggaAGAGAAATCACTCCTTACCAACCCCTAATTTATGAGATT
CCAGAGACAAATATAGCGGCAAAGCAGTTGATGTTTGGGCAATGGGGATa
acattattttgttttctttacgGCAAGTGTCCATTCTACAGTTCATTGAT
GGGCGAACTcatcactaaaatcaaatcgGAGCCACTGGTGTTTCCAGAAA
GTCCCATCGTCAACCCACAAGCCAAAGATCTGATATCAAGGATGTTGGCG
AAAGATCCTAAAGAAAGAATAACCGTTCTTGAAATGAAGGAGCATCACTG
GGTAACAGATGGTGGTCGTGTTACATTAGCAGCAACCGAAGATCATTGTA
CTGTTATTGAAGTCACTGATGAAGAAGTCAAAAATAGCGTTAAAATTATC
TCCAAACTTTCAAGTCTCgtATTCGCAAAATCCATATTAAAAGGTCGATC
TTTCGTCCCTGGCagaggaaagaaaaacaaatggaAGAGAAATCACTCCT
TACCAACCCCTAATTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035481XLOC_035481Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056325-proteinTCONS_00056325-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056325-exon-scaffold_272-1491911889:307634..307714TCONS_00056325-exon-scaffold_272-1491911889:307634..307714Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1510915933:307634..307714TCONS_00056325-exon-scaffold_272-1510915933:307634..307714Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1575043694:307634..307714TCONS_00056325-exon-scaffold_272-1575043694:307634..307714Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1491911889:308166..308221TCONS_00056325-exon-scaffold_272-1491911889:308166..308221Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1510915933:308166..308221TCONS_00056325-exon-scaffold_272-1510915933:308166..308221Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1575043694:308166..308221TCONS_00056325-exon-scaffold_272-1575043694:308166..308221Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1491911889:309681..309786TCONS_00056325-exon-scaffold_272-1491911889:309681..309786Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1510915933:309681..309786TCONS_00056325-exon-scaffold_272-1510915933:309681..309786Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1575043694:309681..309786TCONS_00056325-exon-scaffold_272-1575043694:309681..309786Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1491911889:310082..310210TCONS_00056325-exon-scaffold_272-1491911889:310082..310210Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1510915933:310082..310210TCONS_00056325-exon-scaffold_272-1510915933:310082..310210Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1575043694:310082..310210TCONS_00056325-exon-scaffold_272-1575043694:310082..310210Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1491911889:315548..316604TCONS_00056325-exon-scaffold_272-1491911889:315548..316604Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1510915933:315548..316604TCONS_00056325-exon-scaffold_272-1510915933:315548..316604Clytia hemisphaericaexon
TCONS_00056325-exon-scaffold_272-1575043694:315548..316604TCONS_00056325-exon-scaffold_272-1575043694:315548..316604Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_272supercontigscaffold_272:307634..316604 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.763995 tpm) - - (36.6307 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.60828 1.41788 1.28411 0.763995 7.85125 5.60903 6.58013 6.40524 5.74116 6.00165 5.60546 4.73675 4.64167 5.80458 5.62458 8.5171 4.78084 5.70572 6.39658 6.23467 4.04875 4.26373 3.5823 3.56074 5.07637 4.11375 3.99983 3.44068 35.3689 36.6307
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
200400600800100012001400Expect = 8.72e-36 / Id = 48.70SequenceKKCC1
Match NameE-valueIdentityDescription
KKCC18.725e-3648.70Calcium/calmodulin-dependent protein kinase kinase... [more]
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