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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056474 ID=TCONS_00056474|Name=TCONS_00056474|organism=Clytia hemisphaerica|type=transcript|length=715bp
GCTTGCTTTCTTCAGAAGTTTCCTCTTCGACTTTAGCGACAAGTTCTTCG
ACTGTTTGTGAAACATCTTCTGTTGGCTTGCTTTCTTCTGAAGTTTCCTC
TTCGACTTTAGAGACAAGTTCTTCGACTGTTTGTGAAACTTCTTCCGTTG
GCTTACTTTCTTCAGAAGTTTCCTCTTCGACTTTAAAGACAAGTTCTTCG
ACTGTTTGGGAAACTTCTTTTGTTGGTTTGCTTTCTTCAAAAGTTTCCTC
TTCGACTTTAGAGACAAGTTCTTCGACTGTTTGAGAAACTTCTTCTGTTG
GTTTGATTTCTTCTGAAGTTTCCTCTTCGATTTTGGACACAAGTTCTTCC
ACTGTTTCTGAAACTTCTTCAGTTGGCTTGCTTTCTTCTGAAGTTTCCTC
TTCGACTTTGGACACAAGTTCATCGACTGTTTGTGAAACTTCTTCATctg
tttgaaaaactttttctcttgGTTTGCTTTCTTCAGAAGTTTCTAAGTCG
ACTTTGGACACGAGTTCTTCGACTGTTTCTGAAACTTTTTCAACTGTTTG
TGAAATTTCTTCTGTTGGCTTGCTTTCTTCTAAAGTTTCCTCTTCAACTT
TAAAGAGAAGTTCTTCAACTGTTTGTGAAACCACTTCATCTGCTTGAGGA
ACATCCTCATTTGGTTTGCTTTCTTCAGAAGTTTCTTCTTCGACTTTGGA
CACAAGTTCTTCGAC Run BLAST on NCBI transcript from alignment at scaffold_276:154640..155504- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056474 ID=TCONS_00056474|Name=TCONS_00056474|organism=Clytia hemisphaerica|type=transcript|length=865bp|location=Sequence derived from alignment at scaffold_276:154640..155504- (Clytia hemisphaerica)
GCTTGCTTTCTTCAGAAGTTTCCTCTTCGACTTTAGCGACAAGTTCTTCG
ACTGTTTGTGAAACATCTTCTGTTGGCTTGCTTTCTTCTGAAGTTTCCTC
TTCGACTTTAGAGACAAGTTCTTCGACTGTTTGTGAAACTTCTTCCGTTG
GCTTACTTTCTTCAGAAGTTTCCTCTTCGACTTTAAAGACAAGTTCTTCG
ACTGTTTGGGAAACTTCTTTTGTTGGTTTGCTTTCTTCAAAAGTTTCCTC
TTCGACTTTAGAGACAAGTTCTTCGACTGTTTGAGAAACTTCTTCTGTTG
GTTTGATTTCTTCTGAAGTTTCCTCTTCGATTTTGGACACAAGTTCTTCC
ACTGTTTCTGAAACTTCTTCAGTTGGCTTGCTTTCTTCTGAAGTTTCCTC
TTCGACTTTGGACATAAGTTCTTCGACTGTTTGTGAAATTTCTTCTGTTG
GCTTGCTTTCTTCTGAAGTTTCCTGTTCAACATTAGAGACAAGTTCTTCG
ACTGTTTGTGAAACTTCTTCCGTTGACTTGCTTTCTTCTGAAGTTTCCTC
TTCAACATTAGACACAAGTTCATCGACTGTTTGTGAAACTTCTTCATCTG
TTTGAAAAACTTTTTCTCTTGGTTTGCTTTCTTCAGAAGTTTCTAAGTCG
ACTTTGGACACGAGTTCTTCGACTGTTTCTGAAACTTTTTCAACTGTTTG
TGAAATTTCTTCTGTTGGCTTGCTTTCTTCTAAAGTTTCCTCTTCAACTT
TAAAGAGAAGTTCTTCAACTGTTTGTGAAACCACTTCATCTGCTTGAGGA
ACATCCTCATTTGGTTTGCTTTCTTCAGAAGTTTCTTCTTCGACTTTGGA
CACAAGTTCTTCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056474-exon-scaffold_276-1575043694:155092..155504 | TCONS_00056474-exon-scaffold_276-1575043694:155092..155504 | Clytia hemisphaerica | exon |
| TCONS_00056474-exon-scaffold_276-1575043694:154640..154941 | TCONS_00056474-exon-scaffold_276-1575043694:154640..154941 | Clytia hemisphaerica | exon |
| TCONS_00056474-exon-scaffold_276-1510915933:155092..155504 | TCONS_00056474-exon-scaffold_276-1510915933:155092..155504 | Clytia hemisphaerica | exon |
| TCONS_00056474-exon-scaffold_276-1510915933:154640..154941 | TCONS_00056474-exon-scaffold_276-1510915933:154640..154941 | Clytia hemisphaerica | exon |
| TCONS_00056474-exon-scaffold_276-1491911889:155092..155504 | TCONS_00056474-exon-scaffold_276-1491911889:155092..155504 | Clytia hemisphaerica | exon |
| TCONS_00056474-exon-scaffold_276-1491911889:154640..154941 | TCONS_00056474-exon-scaffold_276-1491911889:154640..154941 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:154640..155504 - |
Blast
The following BLAST results are available for this feature:
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