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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056486 ID=TCONS_00056486|Name=TCONS_00056486|organism=Clytia hemisphaerica|type=transcript|length=1171bp
AAAGTTTTGCACATTTAAGTCCCTTGGGTATAAGTCCTTGGGGCATTCCT
ctcatttttaattgaatttaGATGGGAGGGACGTACAGATAGGTTCTGGC
ATACCTTGGTCAATACTATGAAGTAGGTAATATTTTGCATGCTTGTTCCT
TGGAATCCTAGGAGTGTTTTGTTATTCCCCCTAGAGGTTGATTGGTGCGA
ATTTTGCACACAAGTTCTTGAGTGTATCCCTGGGTGTNCTGGCATACCTT
GGTCAATACTATGAAGTAGTTAATATTTTGCATGCTTGTTCCTTGGAATC
CTAGGAGTGTTTTGTTATTCCCCCTAGAGGTTGATTGGTGCGAATGTTGC
ACACAAGTTCTTCAGTGTATCCCTGGGTGTGCTTCATACTCTATTGGATT
TTGGGGGTGGGGTTACTGGTTTTTGTCCTAAACTTACAAAAATGtgggca
ggctggagacctCGAAATTGTCTGAATTCGCTTCAATTTCGAGCACATTG
CGCTTTGGGTGAATTCACTGGGgcgtttccccatttttcaattttgcaat
TTAGTTTTAGGGTCACCAACTAAAGGCTGAGAACTAAGTCGAAATTTGGA
CATACTGGGGATCTCTGAAGTGTTTGaaaggcaaaaatttgcaatcatgg
tccttgggtgaatccctgggttagtttttcttcattttcaatgtgaTATG
ATTCAAGGGTGTTTTCACACCCCATAACGCCAATATATAACACCATTACT
TAGTTTACTTAGTTTACAGGATACTTTAGAGTGATTcgatttggctggaa
ttttgcaTATTGCTCCTTGGGTAATTCCTCAGTCCTAATTAGCATGCGGG
TCTACAATTGGCCTCTGGGAGACTATGAAGATGCCGAAGCTGAGCTGGTG
TTGTAAGCACCTCCAAAACTTTCCATTGGGGGATAATTACCGTGCTCATA
GTCAGTTTAGAGGCATATTACATTTTGTCGCTACCCTTTTTATGCGAGAA
TCTTTCTAATTCATGAATAAACTTGATTTACcacaaaacttttcattttc
gtcATGCTGTCCCACAGCTcgaaatttcaacttttcatgccgtcccgcgg
ttaaattttcaattttatcatgCTGTCCCGCAGTTTAACTCTTCAATTTT
ATCATGCTACCCTGTGGCTTG Run BLAST on NCBI transcript from alignment at scaffold_276:238317..239487- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056486 ID=TCONS_00056486|Name=TCONS_00056486|organism=Clytia hemisphaerica|type=transcript|length=1171bp|location=Sequence derived from alignment at scaffold_276:238317..239487- (Clytia hemisphaerica)
AAAGTTTTGCACATTTAAGTCCCTTGGGTATAAGTCCTTGGGGCATTCCT
CTCATTTTTAATTGAATTTAGATGGGAGGGACGTACAGATAGGTTCTGGC
ATACCTTGGTCAATACTATGAAGTAGGTAATATTTTGCATGCTTGTTCCT
TGGAATCCTAGGAGTGTTTTGTTATTCCCCCTAGAGGTTGATTGGTGCGA
ATTTTGCACACAAGTTCTTGAGTGTATCCCTGGGTGTNCTGGCATACCTT
GGTCAATACTATGAAGTAGTTAATATTTTGCATGCTTGTTCCTTGGAATC
CTAGGAGTGTTTTGTTATTCCCCCTAGAGGTTGATTGGTGCGAATGTTGC
ACACAAGTTCTTCAGTGTATCCCTGGGTGTGCTTCATACTCTATTGGATT
TTGGGGGTGGGGTTACTGGTTTTTGTCCTAAACTTACAAAAATGTGGGCA
GGCTGGAGACCTCGAAATTGTCTGAATTCGCTTCAATTTCGAGCACATTG
CGCTTTGGGTGAATTCACTGGGGCGTTTCCCCATTTTTCAATTTTGCAAT
TTAGTTTTAGGGTCACCAACTAAAGGCTGAGAACTAAGTCGAAATTTGGA
CATACTGGGGATCTCTGAAGTGTTTGAAAGGCAAAAATTTGCAATCATGG
TCCTTGGGTGAATCCCTGGGTTAGTTTTTCTTCATTTTCAATGTGATATG
ATTCAAGGGTGTTTTCACACCCCATAACGCCAATATATAACACCATTACT
TAGTTTACTTAGTTTACAGGATACTTTAGAGTGATTCGATTTGGCTGGAA
TTTTGCATATTGCTCCTTGGGTAATTCCTCAGTCCTAATTAGCATGCGGG
TCTACAATTGGCCTCTGGGAGACTATGAAGATGCCGAAGCTGAGCTGGTG
TTGTAAGCACCTCCAAAACTTTCCATTGGGGGATAATTACCGTGCTCATA
GTCAGTTTAGAGGCATATTACATTTTGTCGCTACCCTTTTTATGCGAGAA
TCTTTCTAATTCATGAATAAACTTGATTTACCACAAAACTTTTCATTTTC
GTCATGCTGTCCCACAGCTCGAAATTTCAACTTTTCATGCCGTCCCGCGG
TTAAATTTTCAATTTTATCATGCTGTCCCGCAGTTTAACTCTTCAATTTT
ATCATGCTACCCTGTGGCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056486-exon-scaffold_276-1575043694:238317..239487 | TCONS_00056486-exon-scaffold_276-1575043694:238317..239487 | Clytia hemisphaerica | exon |
| TCONS_00056486-exon-scaffold_276-1510915933:238317..239487 | TCONS_00056486-exon-scaffold_276-1510915933:238317..239487 | Clytia hemisphaerica | exon |
| TCONS_00056486-exon-scaffold_276-1491911889:238317..239487 | TCONS_00056486-exon-scaffold_276-1491911889:238317..239487 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:238317..239487 - |
Blast
The following BLAST results are available for this feature:
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