TCONS_00056666 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056666
Unique NameTCONS_00056666
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056666 ID=TCONS_00056666|Name=TCONS_00056666|organism=Clytia hemisphaerica|type=transcript|length=195bp
GCAAGAAATCCAGACACGCTAAGTAAGGTCTAAGCCACTGCAAGATGGAA
TGATAGACATGGTGATTGGGTTTGAAGAGCTATTGCGGAAAGTAaatagg
cttttgaaattctgtaTGGTTAAAGAAAGGGCAGCACAAAAGCAAATCAA
CTCAATATAAAAATAGCCAGAAAAAAGATTTGAAGGCACAATGAG
Run BLAST on NCBI

transcript from alignment at scaffold_280:10238..10432

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056666 ID=TCONS_00056666|Name=TCONS_00056666|organism=Clytia hemisphaerica|type=transcript|length=195bp|location=Sequence derived from alignment at scaffold_280:10238..10432 (Clytia hemisphaerica)
CTCATTGTGCCTTCAAATCTTTTTTCTGGCTATTTTTATATTGAGTTGAT
TTGCTTTTGTGCTGCCCTTTCTTTAACCAtacagaatttcaaaagcctat
tTACTTTCCGCAATAGCTCTTCAAACCCAATCACCATGTCTATCATTCCA
TCTTGCAGTGGCTTAGACCTTACTTAGCGTGTCTGGATTTCTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035690XLOC_035690Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056666-exon-scaffold_280-1491911889:10238..10432TCONS_00056666-exon-scaffold_280-1491911889:10238..10432Clytia hemisphaericaexon
TCONS_00056666-exon-scaffold_280-1510915933:10238..10432TCONS_00056666-exon-scaffold_280-1510915933:10238..10432Clytia hemisphaericaexon
TCONS_00056666-exon-scaffold_280-1575043694:10238..10432TCONS_00056666-exon-scaffold_280-1575043694:10238..10432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_280supercontigscaffold_280:10238..10432 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056666 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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