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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056679 ID=TCONS_00056679|Name=TCONS_00056679|organism=Clytia hemisphaerica|type=transcript|length=492bp
TaagattattatttttgccattttcatttttaaggagcTTATGCTGAAAA
GATGGAGCAAAGACTTTTGATTGATCATTTTCTCAGGTTCGTACCCATCC
TACTGGCCCTctggaaaatgcaaaaataactgATTGTTCAAAGCAAGATT
CGATGAACACTAATTGCGTAAATCTAACTCGTCAGTCCAGTTGAGCCAAA
ATATCATCAACATGTTACAGGTTGTGCATTAAGGAGAAAGGACTTTCAAA
CATGTGTGTTCGCAGATCGATTTCATCAATGTCTGACTGAGCCGACTTGA
AGGAAAAGAAGGAAACCAAatttaaacacaaagaaaagcaTGTCAAACTT
TAATGTCACCAAGTATTTGAAGACGTCCGATGTATTCACAAGTAATAACC
AGAATAGAAGTTAAAGACTGTTATTAGACTTTTTTAACCATATATAAATT
ATCAAGGCGTAAAATTTGTATGTAGTTTTTTTTCACCCTGTT Run BLAST on NCBI transcript from alignment at scaffold_281:232434..234359+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056679 ID=TCONS_00056679|Name=TCONS_00056679|organism=Clytia hemisphaerica|type=transcript|length=1926bp|location=Sequence derived from alignment at scaffold_281:232434..234359+ (Clytia hemisphaerica)
TaagattattatttttgccattttcatttttaaggagcTTATGCTGAAAA
GATGGAGCAAAGACTTTTGATTGATCATTTTCTCAGGTGAGTGAAATTTC
TAAGACGATCATTTCTCTAATAATTGGCtagaaatttctgaaaattaacT
CGCATCATAATGAGTTtctaaagtttaatttttttgataagtTCTTTGGG
AAGCAAgtacaaatttctttttttctgaaagaacaGAGACACAAAagtat
tttgttcaaaaagagACCGGTGAATTGCAATAACTGTGACTTTTGATTAG
TTGACAACAACCCACTTCTGTGGTGGAAGACAAAATCAGAGAAAGATTTT
CGATCAAAAGACGTTATTATTTAATCAAAATAAGGGTCTTATTATCGTGT
GGTATTGTATGGGTTTTCTTTGAGAAACTTTAGTTTCATTCGTATCAGAA
TACCCTGATTGACTGTTACTTTACCTTTTAGGTTCGTACCCATCCTACTG
GCCCTctggaaaatgcaaaaataactgATTGTTCAAAGCAAGGTATGCTA
TTGTTTGGTGTGTTTTAGATACCACAAGTCAACTTTATTATTAACGAATA
ATACACCCCTCTTTCAGTGATCCGGTGAGAAATTCTTAACCACTTAGGAA
TGAAATGAAGGAGCTAATCGAGATAACATcagattaaagtttttggtTTC
TTGACCCTCAATCCTCAACCctgttttctgtttttattttaggacAAGAT
TGAGATATTTTAGGCTCTTTATCCAATTTTACTCTTGAATTTCTTGCAAT
TCAATTTCAGcttagcattgttcttaaattgttgtaGCTTCATTACTATC
TATTATAAAAAAGAGCTTGtatttacaaagtttttgaGGGTTNGTAAATT
GTTGTAGCTTCATTACTATCTATTATAAAAAAGAGCTtgtatttataaag
tttttgagaGTTTTCTACTCTTTcccaaaatcaaaacttttctttcctCA
TTTTGTTTTCCAGATTCGATGAACACTAATTGCGTAAATCTAACTCGTCA
GTCCAGTTGAGCCAAAATATCATCAACATGTTACAGGTAAACCTCACAGA
TACTCATATGATAGAAATGCTTAGATTCATCCATCGGATTGGGATCATAG
TTTCTAAATACCCTCTTTAAGTACCGAGATTTTGGGTAAAACCTTTCAAG
GGAGGCACCTGTACCCTCAACTTCATATCAATAAAGGTGAAATGGAGCTC
ACATCACGATCTCAAAAAACTTGCTTTGTAGAATACATTTTTTCAgcaag
tggggataaaattgatggactaaaactcgatgggaATTAATATTCCCGTA
TTTTTTATGGTTAGGGATTTCaactcttttgtttttaagtcagaaaattc
agtagggatgagaaaaatagcataaaattttgcagtgaggatcggTTTAT
TTCATTATCTTCAATGGGGACAATAAGTCTCTACTTAAAACTGTGACAAA
TTAACACCCTTTTTGTCCCATAGGTTAATAAGTTATTTTGGCACACTGCT
ATCCGGAGGGTTACAGTCAATAATTATCCCTAAAGAAAAGACATCCCTTT
GATTTTGTCATACTATTTGtaattattttcataaattattattTCCCTTT
CAAGGTTGTGCATTAAGGAGAAAGGACTTTCAAACATGTGTGTTCGCAGA
TCGATTTCATCAATGTCTGACTGAGCCGACTTGAAGGAAAAGAAGGAAAC
CAAatttaaacacaaagaaaagcaTGTCAAACTTTAATGTCACCAAGTAT
TTGAAGACGTCCGATGTATTCACAAGTAATAACCAGAATAGAAGTTAAAG
ACTGTTATTAGACTTTTTTAACCATATATAAATTATCAAGGCGTAAAATT
TGTATGTAGTTTTTTTTCACCCTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056679-exon-scaffold_281-1491911889:232434..232519 | TCONS_00056679-exon-scaffold_281-1491911889:232434..232519 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1510915933:232434..232519 | TCONS_00056679-exon-scaffold_281-1510915933:232434..232519 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1575043694:232434..232519 | TCONS_00056679-exon-scaffold_281-1575043694:232434..232519 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1491911889:232915..232975 | TCONS_00056679-exon-scaffold_281-1491911889:232915..232975 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1510915933:232915..232975 | TCONS_00056679-exon-scaffold_281-1510915933:232915..232975 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1575043694:232915..232975 | TCONS_00056679-exon-scaffold_281-1575043694:232915..232975 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1491911889:233447..233519 | TCONS_00056679-exon-scaffold_281-1491911889:233447..233519 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1510915933:233447..233519 | TCONS_00056679-exon-scaffold_281-1510915933:233447..233519 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1575043694:233447..233519 | TCONS_00056679-exon-scaffold_281-1575043694:233447..233519 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1491911889:234088..234359 | TCONS_00056679-exon-scaffold_281-1491911889:234088..234359 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1510915933:234088..234359 | TCONS_00056679-exon-scaffold_281-1510915933:234088..234359 | Clytia hemisphaerica | exon |
| TCONS_00056679-exon-scaffold_281-1575043694:234088..234359 | TCONS_00056679-exon-scaffold_281-1575043694:234088..234359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_281 | supercontig | scaffold_281:232434..234359 + |
Blast
The following BLAST results are available for this feature:
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