TCONS_00056743 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056743
Unique NameTCONS_00056743
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056743 ID=TCONS_00056743|Name=TCONS_00056743|organism=Clytia hemisphaerica|type=transcript|length=170bp
TGACAGTCATAGAGTCAAGATGTCAAGGAAAtcagattttcacaaatttt
aataataattcattttgattttcacttGTGCACTGGGTACTCACAGTATT
TATTCACTGGCTACCTGTTTGAACAATATCAACGTTCCGAACACTGTCAG
TCTCAAATCCCTTTGCACTA
Run BLAST on NCBI

transcript from alignment at scaffold_282:344787..345242+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056743 ID=TCONS_00056743|Name=TCONS_00056743|organism=Clytia hemisphaerica|type=transcript|length=456bp|location=Sequence derived from alignment at scaffold_282:344787..345242+ (Clytia hemisphaerica)
TGACAGTCATAGAGTCAAGATGTCAAGGAAAtcagattttcacaaatttt
aataataattcattttgattttcacttGTGCACTGGGTACTCACAGTATT
TATTCACTGGCTACCTGGTAGGTTTTTGCTTTTGCATTCttgtttctttg
cttttttcagtgtggccattttgtttttctttcatgtgtcaaccattttg
tttttctgtgCCTTAGGTTTAAGACTTTGTATATTTTCAGTACATTGAAA
CTTATTCACTCATATAAACTTATACTTTTTCAATTCATATTTACACATCT
AGACTTATACTTTTATAGACATTTTGGacttagaaaatctttcaaatatt
ttggacttttttattttgaaacttatttGACCAATTGTAATTTACCTTTT
TAGTTTGAACAATATCAACGTTCCGAACACTGTCAGTCTCAAATCCCTTT
GCACTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035750XLOC_035750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056743-exon-scaffold_282-1491911889:344787..344903TCONS_00056743-exon-scaffold_282-1491911889:344787..344903Clytia hemisphaericaexon
TCONS_00056743-exon-scaffold_282-1510915933:344787..344903TCONS_00056743-exon-scaffold_282-1510915933:344787..344903Clytia hemisphaericaexon
TCONS_00056743-exon-scaffold_282-1575043694:344787..344903TCONS_00056743-exon-scaffold_282-1575043694:344787..344903Clytia hemisphaericaexon
TCONS_00056743-exon-scaffold_282-1491911889:345190..345242TCONS_00056743-exon-scaffold_282-1491911889:345190..345242Clytia hemisphaericaexon
TCONS_00056743-exon-scaffold_282-1510915933:345190..345242TCONS_00056743-exon-scaffold_282-1510915933:345190..345242Clytia hemisphaericaexon
TCONS_00056743-exon-scaffold_282-1575043694:345190..345242TCONS_00056743-exon-scaffold_282-1575043694:345190..345242Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:344787..345242 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056743 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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