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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056808 ID=TCONS_00056808|Name=TCONS_00056808|organism=Clytia hemisphaerica|type=transcript|length=1327bp
caaagccttagtatgttcttagaatgttcttaaatttttgggcctcgaag
ccttatgttcttatatagtttgttcttataaaaaaaaaacgtgtacaccc
tataaataagaacaggataaatacaatttgaggctcaaagtgccaaaaaa
taagaacagccaagcctcagaaaaattttactggctcttataaaaaaggg
gtAAATCATGGAAGCAACACAAAAGCCTCCgtgacttaaaaaaaaattgt
ttatgatATAGAGAGAGGTCTTATTATATCGACTTCCGTTTGATCATTTC
CTGTCCAATCTTAATCATCAACATGATTTAATCGCACTGGCATTATAAAC
ATACTCGCCACCTTTGATGCCTGGTTATAATCAACAAATAAAAGGGTTgc
ttttgtttttgataattgtccgctttttttttaattacataAAGAAGTAG
GATTAGAGGCCCCCTATTGTTCAGAGAATCTAATTAATACCTTCTTTTTT
GACCCTGTTTTATCGTGTCTTGGTAGTATGATATAATGACTTTCTCATTT
TATAAAGTTCCCACTGCAGATGAGTGTTGTAATACCATTTTTTTTAAGGA
ACCTGTAAATTAATGTTCAGGCTTGGCtgcttttattttttgacactttt
tggaCCCtcaatttgcttaaaattttcTCAGGTTTGATATTAAATTAGTT
GTACTTTTGGTCATTATTATTTGGAGAGCATTTGATCTTGGAACCTCGCG
AATGCGGAAAAATAAAGCATACTGCAGCATATAATAATGTGATAAAACCT
TTTGTGCGTCACTAAGATATATCATTCCTTGTTTATTGCTTACCCAGTAG
CCATTTCTAGCCAAATAAGGGTTCCCATAGACTCTTCGCGATTCTGTTGT
GATTATCCTTTATCCTAAGTCGAATGGAACGGAAATCTATAGAAAAATAG
AGACTTAGAAGCAACTGCATCATTGCCTTTAGATTCATGATATTAAGAAA
GAAAGCTAACAATTATTGTTCGTTAAACACAATAAGCTTTTCTAATTTGA
ATAGAGATCTATTCGTTGATTAGAAAATAGGTTATTTACTCAACAGCCGT
AAttatatatttgaacaatagaaatgaATCTCTCTCTCATTATCATGGCA
AAAACAATAGTATAGTCGTTTAGTTTTTCGATAACAAAGCAAAGTAAATA
TCTCTTTCATAAGCTAAAGCATTCAGTTGTATTGAGAACGAAAGAAATTG
GCTTGTTTGCTAAGTTAGAGTTGTATATAATCGTTGGAAATGGCTGGACA
TTCGATATTTGTTAGTTGTAATTATAT Run BLAST on NCBI transcript from alignment at scaffold_282:414367..415693 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056808 ID=TCONS_00056808|Name=TCONS_00056808|organism=Clytia hemisphaerica|type=transcript|length=1327bp|location=Sequence derived from alignment at scaffold_282:414367..415693 (Clytia hemisphaerica)
ATATAATTACAACTAACAAATATCGAATGTCCAGCCATTTCCAACGATTA
TATACAACTCTAACTTAGCAAACAAGCCAATTTCTTTCGTTCTCAATACA
ACTGAATGCTTTAGCTTATGAAAGAGATATTTACTTTGCTTTGTTATCGA
AAAACTAAACGACTATACTATTGTTTTTGCCATGATAATGAGAGAGAGAT
tcatttctattgttcaaatatataaTTACGGCTGTTGAGTAAATAACCTA
TTTTCTAATCAACGAATAGATCTCTATTCAAATTAGAAAAGCTTATTGTG
TTTAACGAACAATAATTGTTAGCTTTCTTTCTTAATATCATGAATCTAAA
GGCAATGATGCAGTTGCTTCTAAGTCTCTATTTTTCTATAGATTTCCGTT
CCATTCGACTTAGGATAAAGGATAATCACAACAGAATCGCGAAGAGTCTA
TGGGAACCCTTATTTGGCTAGAAATGGCTACTGGGTAAGCAATAAACAAG
GAATGATATATCTTAGTGACGCACAAAAGGTTTTATCACATTATTATATG
CTGCAGTATGCTTTATTTTTCCGCATTCGCGAGGTTCCAAGATCAAATGC
TCTCCAAATAATAATGACCAAAAGTACAACTAATTTAATATCAAACCTGA
gaaaattttaagcaaattgaGGGtccaaaaagtgtcaaaaaataaaagca
GCCAAGCCTGAACATTAATTTACAGGTTCCTTAAAAAAAATGGTATTACA
ACACTCATCTGCAGTGGGAACTTTATAAAATGAGAAAGTCATTATATCAT
ACTACCAAGACACGATAAAACAGGGTCAAAAAAGAAGGTATTAATTAGAT
TCTCTGAACAATAGGGGGCCTCTAATCCTACTTCTTtatgtaattaaaaa
aaaagcggacaattatcaaaaacaaaagcAACCCTTTTATTTGTTGATTA
TAACCAGGCATCAAAGGTGGCGAGTATGTTTATAATGCCAGTGCGATTAA
ATCATGTTGATGATTAAGATTGGACAGGAAATGATCAAACGGAAGTCGAT
ATAATAAGACCTCTCTCTATatcataaacaatttttttttaagtcacGGA
GGCTTTTGTGTTGCTTCCATGATTTaccccttttttataagagccagtaa
aatttttctgaggcttggctgttcttattttttggcactttgagcctcaa
attgtatttatcctgttcttatttatagggtgtacacgttttttttttat
aagaacaaactatataagaacataaggcttcgaggcccaaaaatttaaga
acattctaagaacatactaaggctttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056808-exon-scaffold_282-1491911889:414367..415693 | TCONS_00056808-exon-scaffold_282-1491911889:414367..415693 | Clytia hemisphaerica | exon |
| TCONS_00056808-exon-scaffold_282-1510915933:414367..415693 | TCONS_00056808-exon-scaffold_282-1510915933:414367..415693 | Clytia hemisphaerica | exon |
| TCONS_00056808-exon-scaffold_282-1575043694:414367..415693 | TCONS_00056808-exon-scaffold_282-1575043694:414367..415693 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_282 | supercontig | scaffold_282:414367..415693 . |
Blast
The following BLAST results are available for this feature:
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