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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056820 ID=TCONS_00056820|Name=TCONS_00056820|organism=Clytia hemisphaerica|type=transcript|length=1245bp taataaataatttaatATATATAACATGTCTGAAGTTAGAAGAGCATCGC ATGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCAATTA GAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGCACT TATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCG CATACAACAGGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCTTGGT CCATCTCACCATGTTTCATTGGGTGGATGTGCATTAACACAAACCAAGAC TTACTCCACACCGCTCTATGATCTAATAGTTGATCAAGAAATGAATGAAG AATTACACAAGACAGGGAAATTTGACAAGATGAGTATTTCGACGGATGAG GATGAACACAGCATTGAAATGCATTTACCATATATTGCCAAAGTCATGGA AAGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTT CCCACGATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAA GACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAG CCGCTTCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAAT CTATTGAAGACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACTACAT ACATCAGAGTATTATCAATATCTTGAAAGGTATTCAAACACGATATGTGG AAGAAAACCTATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAAACAG ATGGTACAATATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGTCAAA CGGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCTCGTT GTAACACTCTCTTGGGACACAGTTTCATTGCTCGAAAACTGTATTGCTTA CCAGATATTATGTTTACTTTGCTTGAGACAGTACCTGACTGGatgatttc aattttcatattgcCTGAACAATTCGTCATCTACAAAAAGAAGGAATTGc aagttgaaatttttatgtTGTTAATGTTATCATCAATCGACTACTGCTTA CCGACATCTAGAGACTTAGACTATCTTACGCGTTCTCTGTTCTTGAGGAT ATGGATTTCCTATCAACATttcattaaaggttttatttttaaaaaagtgt tcccgtttcatatcagacacattttatatcaggacagtcTCTGCA Run BLAST on NCBI protein sequence of TCONS_00056820-protein >TCONS_00056820-protein ID=TCONS_00056820-protein|Name=TCONS_00056820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MSEVRRASHAGSWYSSSKKELNSQLENWLSKASSKKVGTRALIAPHAGYS YCGACAAFAYNRVDPTNIKRVFILGPSHHVSLGGCALTQTKTYSTPLYDL IVDQEMNEELHKTGKFDKMSISTDEDEHSIEMHLPYIAKVMESKKGQFTV VPVLVGHTSHDKELMYGKIFSKYLKDPENLFVISSDFCHWGSRFRYTYYD KSKGDIHQSIEDLDKQGMKIIERLHTSEYYQYLERYSNTICGRKPIGIFL NAVDQLKTDGTIFEFHQYAQSSKVKRMNDSSVSYAAGTLVSL Run BLAST on NCBI transcript from alignment at scaffold_283:39804..50329+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056820 ID=TCONS_00056820|Name=TCONS_00056820|organism=Clytia hemisphaerica|type=transcript|length=10526bp|location=Sequence derived from alignment at scaffold_283:39804..50329+ (Clytia hemisphaerica) taataaataatttaatATATATAACATGTCTGAAGTTAGAAGAGCATCGC
ATGCAGGATCGTGGTATTCATCCTCAAGTAAGTTCTTCTCCAGTAAATGA
TTTCATAATTTTCTGTAGATCTATTTGAAAGAGTAGTAAATCTCTTCATC
TTTTTTGAAAGACTATTTTAAGGTTATTTCTCACATTGTATCTTCTCATT
TCTTTCTATATGGCTGGAAATGTTGTTAGCATTATAGTTTTTGTGCTTAC
TaccaattattttaaaattNGCTGGAAATGTTCTTAGCATTATAGTTTTT
GTGCTTACTaccaattattttaaaattgttctcaaATCCTAGCGGTCCAG
GGGAGTCAAACAAAAGTTCTGTTTAGTCTGAcgtattaaaatttgaaata
ttggCAAAATTTTCCTGTGTGAACAAATATATTTCCAGtgtaacttttat
tttatgcCGGAGAAATTGGATGAGGATCATGTTAATAGTGGGAGATTCTT
GAAGAAACTTTTCATGCCAGAGAAAGTGTTGATATGCAGGATACAGTTTT
GTGTCTCATCatttaatgttttgtttatttcaattattattattattttt
tttaatgcaaACCATGCTTACTTTCTATAGAGAAAGAACTGAATTCGCAA
TTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGC
ACTTATTGCACCGTaagaattttattgatttttttttaaatcttataaTT
GAAATGCCAAATCAGAAAACAACAACCTTTAGGTTAAATTATGTTAATAA
TCTCAAACACCAAGAGGAAAAAGAAATAATCAAGAATGCACACTAAGTAA
AATTACTTAAAATCCTGTATCAATTATATGGTAATTTTCTTCTTagttaa
taaaaaaaatgatttaaataaaatttaggCCATTCATTTTCTATCCTTAG
TCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACA
GGGTTGATCCAACCAACATGTAAGTATGTTGAAGATTTTGTTTCTGAGAA
AAATTCTTAAACATTATTTCTCAAACATGAAAGGTCATCTGTTCTTTTTT
CCCTTTTAAAAAATGCAAGGGAATCCTCTTACATTTTCAGGAAATTTTCT
ACCCATGTTGAATAACAATGTTCAGTTCATTTCCTTGTTTAATTTATCTG
TTTTAGGGGCTGTTCATATGGAGACAGGCTGGCTCGGCTAGGTGAGGTGG
GATAGATCTTCAAATGTCACGTGATGTACTTTTAGCCATTTGATTCGTCA
AAAACTGTGAGGTGACAATAAAAAATTTATCCCACCTCATTTAGCCGGGC
CAGCCTGCCTCCATAGGAACAGCCCCTTAAAAAGCAGTATAAATGCTTGA
GGGATTCTCACTTATCTATTGATGCAAGTAGTATGTTGATCATCAAATCA
CTTTTTTCTTAGAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTT
CATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTC
TATGATCTAATAGTTGATCAAGAAAGTATGATTTCTTATAAGATTACTTC
TCTGTactaaactttttgacgtttttgtaaggccATTGGTCAGTTGAAAA
ACGAAGCAATTCCATtagtcggttgaaaaatgaagcaatttcattgttcg
aaattgacgtaacggatgaaaaaagtagaacttccttcaacttttttatg
TTCGCACGaatcttttctttaaaaaaaaggttgagtgaaaaactgtcgcc
catttagCGCAAAAGTGGATACCAGCCTTTATACTCCTATCAACTCTAAA
CAGTGTGATCAGTTTTTGAAGACGCTGATACAACAAAAATGCAAGGAAAC
TTCTTTTTGACAACGGTATTGAAAACAAGTGTAGGCGCCCTCTTGTGAAA
AATGTAAGATTCCCTTGCATTGAAATGATAAACTGACGTCAATTTAATAG
ACCTTAGAATGCTAAAAATAGTTTACACTCCACCAGAAAAGTGCCTCTCA
TATGGCACAGTAGTCCATACTAGATGTCACTCACGTTTTTCTACActatt
gggctgttccattaaaaattgacgaacctttttaaggcaaaaaaaaattt
ttaaaaatgtagtgataccctggaaaatggcaaaatttgcaaaagaagtc
ttggaaaattttttttcatactttAAAAGTAAGAGTGGACGAACAGAAAT
GAATctattaccccctggaaattttagaatagcTTTTACCTACTGGTAct
ggaaaaatgaagaaaaaaaagccTGGAAATTATTCTCCGATTATCCCCTG
TAAATGTTCGTCCAACctcctgtatggatataaaatgtaaTGGCCCATTA
ACGTCTATTCAACTTTGtgactttttcaaatgtttggaCCCCGGGTTTTT
TCGGGCTTTAAGCATTAGatattttgacgtcacttttagcTTCCGAAACa
cctgcagtagcaaaaaaattgaggtttttagcccaattattttccaaagc
tgagatatttgactttgaattttcaaatttttacttgaaaatgatagaaa
ttcaacgtaaagaatcatttttagaattctatTTCTTAATGAGGGCAAGT
TAGGGCCTTGTACAGACCATTGAATTATAGATGTTATAAGATTCCTTAAA
AATGTTAGGTATTTCCATGATATCTCAAAAAAAAAGGTGTTTTTCAGTAA
TCATGAATTTTATCAGGCTAAATGAGGTTATTtctattgatttcaaagcc
ctgAAGGGGCTAGATCTGAAtgtcctggatgggaaatgaagctactTATA
TCCCTTTCTCGTGACCCGTGTGTTTTTCAAACTAAATTTGTAAATGCAGG
GCAAACTTAAGGCCTCACTTTTGCTTGCCTgggaaagattgaagatttcA
CTCTTTAGCCGCTTCGGGGCTTCAAACTAAATGATTCTTCTTCTTTCCTC
TCCTCGCCAGTGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGAT
GAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCAT
ATATTGCCAAAGTCATGGAAAGGTATTGATTTTCCAGCATGGAACCTACA
CCGGGGATCATTTTCTTTCGTCAATATGTCAAACAGCTTTTTATTCCTTA
GGGTTCTAAACCTTAGGATCTCTGACATCTTTTATATAAACCCCTACTGA
TCAGACTCAATAGGAAAAGTgggaaatataaattttttgaaagcttcACA
AGCTGAGGCTCGAATCTGAGAATCCTGATAAGCGCTATTCTGGCTAAAAG
GTGTCATGGATGTTGTTTACTATAAACTGCTTGACCCTTTAAGTCTTTGA
GGGTaactttagaacgccatggctTGACCCCTTCCCACATGTGTTTACCC
TTTCGATTTGTATTTAGATACACATAGAATGGGCATATCCCAACCAATCA
AAAAAGTCAAAGCATACCATAccatgggcttttccagaaaagaacTGAAT
ATAgggatggaggatataacatttcttGAAAATCGCCCCTGACACTGTGA
CGTTTGATctccggacagcaggtctaacccctcCGAACAAGCaacagttg
accccctggacattcaaaactaccctcaaacagagcaaatttacccccaa
acagagcaaatttacccccaaacagagcaaatttacccccaaacagagca
aatttacccccaaacagagcaaatttccccccccccccccagacaaGGCG
AATTTTGTACGCTTTTCACTatcccccggacactatatcctccaccccat
gtacagacattttctggaagagccttaTAAGGCTTCAAATccttttaatt
taaatttatctGACACTGGGCTCAATCTTGCTTATCCttgaattcatttt
ttcttgttaattttttttataagaacataagctatgaaggccaaaaaaaa
ttaaaaatttgaaaacgttTTTGACTATAAGACCCGAAACTTTAAGAAGA
CtcgaaaattctaaaaaaagagTTACTTTCTTTAAAATAATGTGTATAGA
CTTAACTATAAGTTTAATAGTTTCTCGAattattctttcattttttagta
AGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCAC
GATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCC
GGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCT
TCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATCTATT
GAAGACCTGGATAAGCAGGTATTGTTCATGATAATTTAAACGCACATGAG
ACAATTTCTAAACGGCTGAATATAGCATCTATAAAAAAGCCAATAGTACA
TTTTATACTTAATAGCTGCAGTTAAGCTAGAATCCGAGAACGTCTGTCTG
TATGTGCGTCTGTCTGTCTATCTTCCGTGTTTGAGTCCAATATACTTTAT
TTAGATTATTGACTATTTGCATAGagctctttttggacctaccccggtgg
ggtagaggtccgcaaaatgtcaatacctaaattgtgacgaagcccgattt
tcgaaaagaatttatttccggccgaaaatgccggaaatatgccggaaaaa
ctgtttttttggcattttctcgagattttatcattagtttttaatgattt
tttgctcaaagatgtgtattaacaatgcccaaaacatgaccgagtccgat
ttttgagaaaattttttttccgaaaatgccggaaatatgcttgaaaaacc
ggttttttgactttttctcgaattttcatttttagttttttctgattttt
tgcagaaagatgcgtattcgcaatcaACTGGAACAAATATATCCATCAAT
AATCAATCGCGAACCAGAactttcaataaatcaaaatcatcataaCTATT
TAGATACCATTCTCATCAATATAAACCAAAACATATCTCGCCATGTAATC
AACATATCAAAATACCAATATCGAATAACATTTAACAACATCCTCTCATG
GAGGACGTAGCCTTCCAGAAACAAGAACTTGATTTAATTTGCTGAAAGAC
GCTCCCCGTTTCGTAAGGGAGTCAGCTAATTGCTTCGAAGCTTCGATCCA
CTTGATTGACATTTTATTATCGTGTATCATTTCATAAATGACACCCATTT
CAATGCGTAGCCTTTCTCCGATACCATAGTTGTTGAGTGAACATTTTGTA
CCAGAGATTTGTTGTCAACAAATGACATTATGGGGATTCGATTCTGGTGA
TCAGATTTTCCGTAAATCAATTCTGTTAGAAGACATCCGATAACGAAAAC
ACCTTCACAACCATCAGCAAGTGACAATGTTTCTGCAGCAAGGACGGCCA
GGAAATGGGACAGCGCTTATCTCCTTTGCCGAAGGGAAAAACAACTCGAC
CACCAGTACTGGAAGTTCCGTCAGGAAGATTGGCGAACGATGCATCATTG
AATAACATTAGCTTAAGATTACTCAGTTCTCCAAGACGTGGGAACTTGAT
TTGTAACGCTTCAGATTTCAACTTTCTGATGACTTTATTCGCTTGCAGTA
AATGATCTACTGTGGCTCGATTGGTTATCATACTCAGTTCAAGAACGCCA
TATGAAAGATCTGGTCGTGTCTGTGTTGCGACCCAATTCAATTGACCGAT
TGCTGTTCTCAAAAGTTTTTCCTCTTTGGATGTCACTTTATCGTTCTTTC
GTAACTTTCTCGACGGCGTGATTGGAATCTCCTTGATTGACTTTACGTAG
ATCAATTGTAATAAAGTTGTTTGATTTTGGTTGGTCGAAACTTCCAATCC
GATGTATTTGAAAATATCAGTTTCCTTAGAACCAACTTTGTAAACTTCAC
ACACCTTTTTCACAACAGTCTTTAAGAAGGTCTGTGAACCAGcatacaaa
aagtcatcaacaTGTAGGATAAACATTCCTGCAAGCTGGTTAGATGAATC
ACGCCACATGAACAGTGCTTTGTCGATGGTTGATTGTACGCATCCAAGTT
TTAGTAGTGTTTCTCGAATCGTAAAATACCAATTACGGGATGCCTCGTTG
AGCCCATACACTACTTTTCGTAGCTTCCAAACTAGGTTCTCGGCTACTTT
TGCTTCAGTGGACGGTTTGACATAGATTTCACGATGAATGTCTTCTCCTT
GTTAAAACGCTGACTTAAATCAATCATTTCGATAGGCCATTGCTTTGTAG
AGGCAATAGCAAAACGAAGAGAGTCCTTGGATATTGTGGGAGAGTCACTT
GGTATATCTGATGTCTCTTCAAATCCTCTCACTACAAGTCGAGCTTTAAC
TGTAAGGTTAGGTTTGGGTTGTTTCTCAGTCACTACCCATCTTGTTGAAA
TCAAGGGTTGGTTTTCGGATTCAACCGGTTCATATACGTCAAATGACTTC
CAATTGAGAAGCTCTTTTTCTTTAGCTTCTTTGACAAGTTCTCTTTCTTG
GTCATTTGTGGGACGAAATATAGCATTGAAATTGACACTTTCACTGGTAT
TTTCCCATTCAATTGCTGAAAAGTCAAGACATAAATGTTCACCATTTTCT
ACATTTTCGACATTGAACCACGATGCAAACTTTCCTGTCGCTTTACCTCC
TCTGCTGATGATACGGGCAGTTTCCCATTCAGAGTTATTTTGTTTAATAC
GCACAATGTCATGTAGTCTAGGAAAAAGTTGTCTTTCTGATACAGCTGCA
GGCATTGGTGGTGGTACTACAGGTGTTTGATCCGAGGTCGGTGGTGTAGG
AGCATCATCTTCATAATGAATTGTCACTGGGCTGTCAATCGGTTCTGTAG
ATCCGGTATCGATGATTTCCGATTTGTCACATGCTGTTGGGACTGTAACT
TTGGAGTTAATACGTTTGGTTGGATTACTGTTTGGATTTGGGTTGAATTC
TTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTNGTTGGGTTGAAT
TTTTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTACATAAACACT
TCCATGGCGGACAAAGATATCTTTCCGTCCTCACCAATAACTTTTCCAGG
ACCTTTCCATTTGTTGCTAGACTCTCGTTTGTAGTATACAGCATCACCGG
ATTCGAAAATTTCGCAATGCACGCCTGATTCGCTCTGATGATTCAGCTTG
TATAAATGCACGTCTCCCTGAGTGTAGACTGTTAAGATGTTGATAGAAAC
GTTCAGATGTTGTTGTACCCTCTAAAGCTGGTGGCTTATCGACGATCACG
GATAGAAGATTAGGATTTTGTCCAAACAAAAGCTGATAGGAACTGTAGCC
GGAGTTCATTTGTAAACAGTTTTTTGCATGAATTGCCCATACTAGGGCAA
CATCGGGTTtcatttttgggttttcttcCAGGACTTTTTGCAAACATTCA
TCAACAACGGCATGGTTACGTTCACATAATCCATTTTGCCATGGACTTTC
TGCTGCAGTGTTTCTgattttgatatgaaattaaacGAAGAATGTATTTA
CCGTCTTCCCACTTCTTGAGATCCATCACTACGACTTCATTGAAGGTGGT
GGCTAATGGTAAACTGACAACTGGCCTTGCaggagtttttttaaatttac
gaCAAATTTGACAATCAGCTGAAATAGCATCAATCACTTTGGAGCAAACT
GGCGACAGAACTCCTGCATCTCGTAATAAACCTTTTAAGCGTTTCGGGGA
CGGATGAGCAAACTGCTTATGAAGTTTTGTGACAACTGCGGAAATTTCCT
GATCACTTTCGACACCGGTAAAGCAACATTCTATGTCAATAGATGTGTCT
CTCAAAGGGATGCAATAATGGCCTGCTGATGTACTTTGTAGGTTAACAGC
ATTTCCGTAAATTTCAGCTTTATCGTTCACCAAATCAAGTTTCATTCCTg
cttttttcattgcatttttaCTTAAAAGCATCGGAATATCACTATCAGTA
ATATCTGTTTCAATGGTGCATTTTTGTCCAGCAAGGTAGCAGGGCAACAA
TGCTTTACCTTTTGATTTGAGTCGTTCACCACCTCCAAACTTGTAAATAG
TATCACTATCTTTGTAAATAATCTCACTTTTTTCACTGTCACTTAGTGAG
TCAATAAAACACTCCATCCAATCTTGTCCAGAAGCTGTTGACGAGCATCC
ACTGTCGAACACGGCAGCATTGGTAGATTCTGTTAACAACACTGTCATTT
CATCATCATTTTGGCCCGTAAACAGAGCAAATTGTTCAGTCTCATGTAGA
ATGAATGTTCAAGATTTTCATAAGCATGAGGGCAATCTTTCACGAAATGT
AATGTTGAATCGCATGCCATACAGCGGAGTATGTTTCCATCACCATCCAA
TGGGTTCGTTTTGCGACTGGTGGATTGACCTCTTCCTCTGTTGAACGGTC
TGTTTTGGTAGTTGGTGAAACGNATGGATTGACCTCTTCCTCTATTGAAC
GGTCTTTTTTGGTAGTTGGTGAAACGTCCTCTGCCTCGTCCTCTGCCACG
ACCGCGATTTGGAAATTTCTGTTTGAAAGTGATGTTAGCTTCCTCCTGGT
TCGATTCATGGATATCCAATTTGATGCTTTTAAATGGTTCGGTTGCGATG
GGTTTTGCTTGTTGtccaaagaaatttttcaatgagtttttcatttgttt
atataACGTGGTGTGTTCATTATAATTAACTCCTGTCAGAACCATAAGAC
GATCATTATTTAGCAACCCTGAGTTCTCAAGTAGTTTAAATGCTAGGACG
CTTTCCGGCaactccattttgaatttttttgttttattgtaaCGCTTCTC
GAATTCAAGTATGTACGTATCCATTGTTTCACCTTCAACTTTCTTATATC
GATCGAAATTGACGTAATATTCGTACACTTCCGCCAACTCATCTTTTTTA
AACACTGTATCAAAGAACGCTATCAAAGTTTCTACGCCATCGTCTTTTTT
CAGATCATCAAGATCATCTTCATTGAATACTTTGTCTCTAATTTGGGATT
TGTCATCCTCTGGTAGAGACAAAGCTACCGCTAATCCTTGCTTCTTCTTG
GCAAGGTTTGTGACATAAGTCCAAGCACGCAATTCTTCTACGTATCTCGT
ATAAGGTTTGTCATCTCCAAAGGCTGGGGGCTTTTGAAAACTTTCTGATG
ATGCCATTTTGAACCACTTCTGCTACCATGAAAAGTCAATAAAGCTGAAT
AATATAAAAGCCCCACAGCCACACCAAATgctaatattttaaaaatatat
actaGCCTATAACGATCAGAAGAATATGAACGTTaacattttttccttat
atttctatgtttttcacacaaaaacattattgataacaatgctcaccatt
aagcatgattcaattaataatcaataaaactgatttttgcgaccagaact
tcctatttattttttccctacaacccttccctctccccccatcaactagt
cagaaaatctgccgtatactatcttcgctttctaaTTTGAATGATGACGC
TACTTTTTCCACCATCAGATTATCAAAGGCAAaggtgttgtgtattttcg
ctaaacgctatatctTCTGACATaggtcttcttttttcttttgaaggGTA
TGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTGAA
AGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAA
TGTAAgtgtgttaaaatattttgtgCATGAACAGCGTGCTGGGTCCGGAA
AAAAACAACTGAAGAATGAGAAATTAAAATGATCTTACTTTTTTGTTTAT
CCAGCTTTGCCAGCATAGAAGCAAGCTTTCTTATTAttatatcataaaaa
agaatCCAATCATTAGGTTTACCATTGCTGCAAAATTTTATTATGTTTTG
TCTGTTACATAGATAACCAGTTCAATTGAACCAtagctttttttgttttt
caatttcaggccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTT
CCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGG
TTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAACACTCTCTTGGGACA
CAGTTTCATTGCTCGAAAACTGTATTGCTTACCAGATATTATGTTTACTT
TGCTTGAGACAGTACCTGACTGGatgatttcaattttcatattgcCTGAA
CAATTCGTCATCTACAAAAAGAAGGAATTGcaagttgaaatttttatgtT
GTTAATGTTATCATCAATCGACTACTGCTTACCGACATCTAGAGACTTAG
ACTATCTTACGCGTTCTCTGTTCTTGAGGATATGGATTTCCTATCAACAT
ttcattaaaggttttatttttaaaaaagtgttcccgtttcatatcagaca
cattttatatcaggacagtcTCTGCA Coding sequence (CDS) from alignment at scaffold_283:39804..50329+ >TCONS_00056820 ID=TCONS_00056820|Name=TCONS_00056820|organism=Clytia hemisphaerica|type=CDS|length=7032bp|location=Sequence derived from alignment at scaffold_283:39804..50329+ (Clytia hemisphaerica) ATGTCTGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTATTCATCCTC AAAGAAAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAAAGCATCGT CAAAGAAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAGGTTATAGT TATTGTGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGATCCAACCAA CATAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTCATTGGGTG GATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTCTATGATCTA ATAGTTGATCAAGAAATGAATGAAGAATTACACAAGACAGGGAAATTTGA CAAGATGAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATT TACCATATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACTGTT GTACCGGTTTTAGTTGGACACACTTCCCACGATAAAGAATTGATGTACGG CAAAATTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTTCGTAATTT CCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGTATTACGAT AAAAGCAAAGGAGATATACACCAATCTATTGAAGACCTGGATAAGCAGgG TATGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTG AAAGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTG AATgccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTTCCACCA ATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGGTTAGTT ATGCGGCTGGTACCCTGGTCTCGTTGTAAATGTCTGAAGTTAGAAGAGCA TCGCATGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCA ATTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGG CACTTATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCT TTCGCATACAACAGGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCT TGGTCCATCTCACCATGTTTCATTGGGTGGATGTGCATTAACACAAACCA AGACTTACTCCACACCGCTCTATGATCTAATAGTTGATCAAGAAATGAAT GAAGAATTACACAAGACAGGGAAATTTGACAAGATGAGTATTTCGACGGA TGAGGATGAACACAGCATTGAAATGCATTTACCATATATTGCCAAAGTCA TGGAAAGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACAC ACTTCCCACGATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTT GAAAGACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGG GAAGCCGCTTCAGATATACGTATTACGATAAAAGCAAAGGAGATATACAC CAATCTATTGAAGACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACT ACATACATCAGAGTATTATCAATATCTTGAAAGGTATTCAAACACGATAT GTGGAAGAAAACCTATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAA ACAGATGGTACAATATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGT CAAACGGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCT CGTTGTAAATGTCTGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTAT TCATCCTCAAAGAAAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAA AGCATCGTCAAAGAAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAG GTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGAT CCAACCAACATAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTC ATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTCT ATGATCTAATAGTTGATCAAGAAATGAATGAAGAATTACACAAGACAGGG AAATTTGACAAGATGAGTATTTCGACGGATGAGGATGAACACAGCATTGA AATGCATTTACCATATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGT TCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCACGATAAAGAATTG ATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTT CGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGT ATTACGATAAAAGCAAAGGAGATATACACCAATCTATTGAAGACCTGGAT AAGCAGgGTATGAAGATTATCGAGCGACTACATACATCAGAGTATTATCA ATATCTTGAAAGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAA TTTTCTTGAATgccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAG TTCCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTC GGTTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAAATGTCTGAAGTTA GAAGAGCATCGCATGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTG AATTCGCAATTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGG AACCAGGGCACTTATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCAT GTGCAGCTTTCGCATACAACAGGGTTGATCCAACCAACATAAAGAGAGTG TTTATCCTTGGTCCATCTCACCATGTTTCATTGGGTGGATGTGCATTAAC ACAAACCAAGACTTACTCCACACCGCTCTATGATCTAATAGTTGATCAAG AAATGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGATGAGTATT TCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCATATATTGC CAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAG TTGGACACACTTCCCACGATAAAGAATTGATGTACGGCAAAATTTTTAGC AAATATTTGAAAGACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTG TCACTGGGGAAGCCGCTTCAGATATACGTATTACGATAAAAGCAAAGGAG ATATACACCAATCTATTGAAGACCTGGATAAGCAGgGTATGAAGATTATC GAGCGACTACATACATCAGAGTATTATCAATATCTTGAAAGGTATTCAAA CACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAATgccgTGGACC AGTTAAAAACAGATGGTACAATATTCGAGTTCCACCAATACGCACAAAGT AGTAAAGTCAAACGGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTAC CCTGGTCTCGTTGTAAATGTCTGAAGTTAGAAGAGCATCGCATGCAGGAT CGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCAATTAGAGAATTGG CTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGCACTTATTGCACC TCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACA GGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCTTGGTCCATCTCAC CATGTTTCATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCAC ACCGCTCTATGATCTAATAGTTGATCAAGAAATGAATGAAGAATTACACA AGACAGGGAAATTTGACAAGATGAGTATTTCGACGGATGAGGATGAACAC AGCATTGAAATGCATTTACCATATATTGCCAAAGTCATGGAAAGtaAGAA AGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCACGATA AAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCCGGAA AACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAG ATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATCTATTGAAG ACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACTACATACATCAGAG TATTATCAATATCTTGAAAGGTATTCAAACACGATATGTGGAAGAAAACC TATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAAACAGATGGTACAA TATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAAT GATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAAATGTC TGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTATTCATCCTCAAAGA AAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAAAGCATCGTCAAAG AAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAGGTTATAGTTATTG TGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGATCCAACCAACATAA AGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTCATTGGGTGGATGT GCATTAACACAAACCAAGACTTACTCCACACCGCTCTATGATCTAATAGT TGATCAAGAAATGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGA TGAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCA TATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACTGTTGTACC GGTTTTAGTTGGACACACTTCCCACGATAAAGAATTGATGTACGGCAAAA TTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTTCGTAATTTCCAGT GATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGTATTACGATAAAAG CAAAGGAGATATACACCAATCTATTGAAGACCTGGATAAGCAGgGTATGA AGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTGAAAGG TATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAATgc cgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTTCCACCAATACG CACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGGTTAGTTATGCG GCTGGTACCCTGGTCTCGTTGTAAATGTCTGAAGTTAGAAGAGCATCGCA TGCAGGATCGTGGTATTCATCCTCAAAGAAAGAACTGAATTCGCAATTAG AGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGCACTT ATTGCACCTCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGC ATACAACAGGGTTGATCCAACCAACATAAAGAGAGTGTTTATCCTTGGTC CATCTCACCATGTTTCATTGGGTGGATGTGCATTAACACAAACCAAGACT TACTCCACACCGCTCTATGATCTAATAGTTGATCAAGAAATGAATGAAGA ATTACACAAGACAGGGAAATTTGACAAGATGAGTATTTCGACGGATGAGG ATGAACACAGCATTGAAATGCATTTACCATATATTGCCAAAGTCATGGAA AGtaAGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTC CCACGATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAG ACCCGGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGC CGCTTCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATC TATTGAAGACCTGGATAAGCAGgGTATGAAGATTATCGAGCGACTACATA CATCAGAGTATTATCAATATCTTGAAAGGTATTCAAACACGATATGTGGA AGAAAACCTATCGGAATTTTCTTGAATgccgTGGACCAGTTAAAAACAGA TGGTACAATATTCGAGTTCCACCAATACGCACAAAGTAGTAAAGTCAAAC GGATGAATGATAGTTCGGTTAGTTATGCGGCTGGTACCCTGGTCTCGTTG TAAATGTCTGAAGTTAGAAGAGCATCGCATGCAGGATCGTGGTATTCATC CTCAAAGAAAGAACTGAATTCGCAATTAGAGAATTGGCTTTCTAAAGCAT CGTCAAAGAAAGTTGGAACCAGGGCACTTATTGCACCTCATGCAGGTTAT AGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACAGGGTTGATCCAAC CAACATAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTTCATTGG GTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTCTATGAT CTAATAGTTGATCAAGAAATGAATGAAGAATTACACAAGACAGGGAAATT TGACAAGATGAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGC ATTTACCATATATTGCCAAAGTCATGGAAAGtaAGAAAGGCCAGTTCACT GTTGTACCGGTTTTAGTTGGACACACTTCCCACGATAAAGAATTGATGTA CGGCAAAATTTTTAGCAAATATTTGAAAGACCCGGAAAACCTTTTCGTAA TTTCCAGTGATTTTTGTCACTGGGGAAGCCGCTTCAGATATACGTATTAC GATAAAAGCAAAGGAGATATACACCAATCTATTGAAGACCTGGATAAGCA GgGTATGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATC TTGAAAGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTC TTGAATgccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTTCCA CCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGGTTA GTTATGCGGCTGGTACCCTGGTCTCGTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00056820-exon-scaffold_283-1491911889:39804..39880 | TCONS_00056820-exon-scaffold_283-1491911889:39804..39880 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:39804..39880 | TCONS_00056820-exon-scaffold_283-1510915933:39804..39880 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:39804..39880 | TCONS_00056820-exon-scaffold_283-1575043694:39804..39880 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:40434..40515 | TCONS_00056820-exon-scaffold_283-1491911889:40434..40515 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:40434..40515 | TCONS_00056820-exon-scaffold_283-1510915933:40434..40515 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:40434..40515 | TCONS_00056820-exon-scaffold_283-1575043694:40434..40515 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:40754..40822 | TCONS_00056820-exon-scaffold_283-1491911889:40754..40822 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:40754..40822 | TCONS_00056820-exon-scaffold_283-1510915933:40754..40822 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:40754..40822 | TCONS_00056820-exon-scaffold_283-1575043694:40754..40822 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:41266..41378 | TCONS_00056820-exon-scaffold_283-1491911889:41266..41378 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:41266..41378 | TCONS_00056820-exon-scaffold_283-1510915933:41266..41378 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:41266..41378 | TCONS_00056820-exon-scaffold_283-1575043694:41266..41378 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:42814..42925 | TCONS_00056820-exon-scaffold_283-1491911889:42814..42925 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:42814..42925 | TCONS_00056820-exon-scaffold_283-1510915933:42814..42925 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:42814..42925 | TCONS_00056820-exon-scaffold_283-1575043694:42814..42925 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:43952..44171 | TCONS_00056820-exon-scaffold_283-1491911889:43952..44171 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:43952..44171 | TCONS_00056820-exon-scaffold_283-1510915933:43952..44171 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:43952..44171 | TCONS_00056820-exon-scaffold_283-1575043694:43952..44171 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:49500..49604 | TCONS_00056820-exon-scaffold_283-1491911889:49500..49604 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:49500..49604 | TCONS_00056820-exon-scaffold_283-1510915933:49500..49604 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:49500..49604 | TCONS_00056820-exon-scaffold_283-1575043694:49500..49604 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1491911889:49863..50329 | TCONS_00056820-exon-scaffold_283-1491911889:49863..50329 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1510915933:49863..50329 | TCONS_00056820-exon-scaffold_283-1510915933:49863..50329 | Clytia hemisphaerica | exon |
TCONS_00056820-exon-scaffold_283-1575043694:49863..50329 | TCONS_00056820-exon-scaffold_283-1575043694:49863..50329 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_283 | supercontig | scaffold_283:39804..50329 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR002737 | MEMO1_fam |
Blast
BLAST of TCONS_00056820 vs. Swiss-Prot (Human)
Match: MEMO1 (Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 5.036e-132 Identity = 179/293 (61.09%), Postives = 221/293 (75.43%), Query Frame = 2
Query: 23 NMSEVRRASHAGSWYSSSKKELNSQLENWLSKASSKKVGTRALIAPHAGYSYCGACAAFAYNRVDPTNIKRVFILGPSHHVSLGGCALTQTKTYSTPLYDLIVDQEMNEELHKTGKFDKMSISTDEDEHSIEMHLPYIAKVMESKKGQFTVVPVLVGHTSHDKELMYGKIFSKYLKDPENLFVISSDFCHWGSRFRYTYYDKSKGDIHQSIEDLDKQGMKIIERLHTSEYYQYLERYSNTICGRKPIGIFLNAVDQLKTDG--TIFEFHQYAQSSKVKRMNDSSVSYAAGTLV 895
N R ASHAGSWY++S +LN+QLE WLS+ S K RA+IAPHAGY+YCG+CAA AY +VDP+ +R+FILGPSHHV L CAL+ Y TPLYDL +DQ++ EL KTG F++MS+ TDEDEHSIEMHLPY AK MES K +FT++PVLVG S KE +GK+FSKYL DP NLFV+SSDFCHWG RFRY+YYD+S+G+I++SIE LDK GM IIE+L + YL++Y NTICGR PIG+ LNA+ +L+ +G F F YAQSS+ + DSSVSYAAG L
Sbjct: 3 NRVVCREASHAGSWYTASGPQLNAQLEGWLSQVQSTKRPARAIIAPHAGYTYCGSCAAHAYKQVDPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRNWQDSSVSYAAGALT 295
The following BLAST results are available for this feature:
|