TCONS_00056825 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056825
Unique NameTCONS_00056825
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1383

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056825 ID=TCONS_00056825|Name=TCONS_00056825|organism=Clytia hemisphaerica|type=transcript|length=1383bp
gaaataatatttttgagTGTTAAAGTAATTGGAtagtttgaatttaaaaa
atataatatatacatAAAAAATCCATGAAAAAGTAACAatgaaagtttgg
tttttcggATTGCTTTTTGTTGCAATTGCTTTAAATTGTGTCATATGCGA
GGGAGATGATTGTGATAATGATTGTGATGATGATTGCTCTGATGATTGCT
CACCAGGGCCATGCGAGGGAGATGATTGCTGTGATAATTTGTGTGCTGAC
GATTGCTCACCAGGGCCACAAGGGCCAGAAGGGCCACCAGGGGCAGATGG
ACCTACAGGGCCACCGGGACCTGAAGGGCCACCGGGACCTGCAGGGGCAG
ATGGACCTCCAGGACCTCAAGGAGATACAGGGCCTATGGGACCTCCAGGA
CCTCAAGGAGATATAGGACCACAAGGTGAGACAGGGCCTGCAGGACCCCC
TGGTCCAATACAACTATGTGGCTGTGGAATCAAAAGTCATTATTTTGTCC
CTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGCTGCTCAGGACCTATGT
GAAGCAAATATGGCAAATTTGGTTGGAATTcacaatttaaaagaaaatct
atatattactgcaaaatatttttctttgaaCACCATTTGGATTGGACTCC
TAAATGACCTCGCTAATTCGAAATTCAAGTGGATTGATAATGATATTTCT
GATTACCGAAACTGGTGTACTGGTACACCACCAACTGGTGCTACAGGGTG
TGTTTTGTTAGATTTTGAGAATGCCAATTCGGATGCACCTGGTTGTTTTA
AGCTTGTCCCTTGTACAGAAGATCATGCATATATTTGTGAATTCAAAGTC
GATTATGATGATAATGGAATATCACTGGTACAAGCCTTATCAACTAATAT
TTGGCAACAAAGATGTCCATCTTGCATTGAGTGATTGGTTTTTCTACTCC
AAGCTATAATATGTACCGATTTTTCATATCTCTTTTGGATAAATTCTGAA
TAcacttttgaaataaaaagatattgCCACTTTCCGGACTCATAAATGCA
TTTATTTATCAAATTATATTTAATATTACTTTAATGTTTgatgataatca
attttcaaacatttgcctaggcatagaGGGCCTAGGCTACACGCATCCCT
CTCACGGCCCACGCCATGAAATTGAAAGCGCCCCCACCCCCTGAATATAG
AGCCTAAGGCGGCGCAACCAGATATTTTTACTTTCCAAAAAAGTGGGGGC
CATGGTCCAACTGCAACCCCCAGTGGCGTGGGccctcccagctggcacac
aacgttgtttcaacgttcatctaacgttatatggacgttgtgaacgttag
ataaacgttgaaacaacgttgtgtgccagctgg
Run BLAST on NCBI

protein sequence of TCONS_00056825-protein

>TCONS_00056825-protein ID=TCONS_00056825-protein|Name=TCONS_00056825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=281bp
MKVWFFGLLFVAIALNCVICEGDDCDNDCDDDCSDDCSPGPCEGDDCCDN
LCADDCSPGPQGPEGPPGADGPTGPPGPEGPPGPAGADGPPGPQGDTGPM
GPPGPQGDIGPQGETGPAGPPGPIQLCGCGIKSHYFVPEGASPMLSWEAA
QDLCEANMANLVGIHNLKENLYITAKYFSLNTIWIGLLNDLANSKFKWID
NDISDYRNWCTGTPPTGATGCVLLDFENANSDAPGCFKLVPCTEDHAYIC
EFKVDYDDNGISLVQALSTNIWQQRCPSCIE
Run BLAST on NCBI

transcript from alignment at scaffold_283:75474..85271-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056825 ID=TCONS_00056825|Name=TCONS_00056825|organism=Clytia hemisphaerica|type=transcript|length=9798bp|location=Sequence derived from alignment at scaffold_283:75474..85271- (Clytia hemisphaerica)
GAAATAATATTTTTGAGTGTTAAAGTAATTGGATAGTTTGAATTTAAAAA ATATAATATATACATAAAAAATCCATGAAAAAGTAACAATGAAAGTTTGG TTTTTCGGATTGCTTTTTGTTGCAATTGCTTTAAATTGTGTCATATGCGA GGGAGATGATTGTGATAATGATTGTGATGATGATTGCTCTGATGATTGCT CACCAGGGCCATGCGAGGGAGATGATTGCTGTGATAATTTGTGTGCTGAC GATTGCTCACCAGGGCCACAAGGGCCAGAAGGGCCACCAGGGGCAGATGG ACCTACAGGGCCACCGGGACCTGAAGGGCCACCGGGACCTGCAGGGGCAG ATGGACCTCCAGGACCTCAAGGAGATACAGGGCCTATGGGACCTCCAGGA CCTCAAGGAGATATAGGACCACAAGGTGAGACAGGGCCTGCAGGACCCCC TGGTCCAATACAACTATGTGGCTGTGGAATCAAAAGTCATTATTTTGTCC CTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGCTGCTCAGGACCTATGT GAAGCAAATATGGCAAATTTGGTTGGAATTCACAATTTAAAAGAAAATCT ATATATTACTGCAAAATATTTTTCTTTGAAGTAAGTGGACTTTTTTATCT AAGCCAGCAGTTTAGTATAAATAAATGTGGTTACACATTATAAAATTCCG AAGGTGACAAAGTGGTTTCTTATCTTATCTGTTGAATATTGCAAATTTTT AATTATATATCCTATTCAAAGTATACATTTTTGAAATCGCCAAGATTTAA GCAGTCCAAAGATGTAAAAGTAACCTATCTATAAAAAGTTGGATTTTTTC TTCTTCATTTTTCTTCATGTTCTTTTCAAATTTCACGGAAAAAACTAACA GTAAATTAATAAGCTCCTTCCTACCTTCCCAAGGATACCAAACTTTTTAA GATTGAAGCATTGGTTGAGAAATAACAAGCAAAGCAAAATTAAGTGCACA CTTATCGTGAACAGACTTCAGAAAAATTAATTAATTTGGAATTGGGAATT GATCTGGTCAGGGAAACTCTCAAATTGTCACTTTCTAGTCAGTCAAAAAA GTATCAGGGATTTACCAAACCTTTTGCAATTGTTAGAAAAGATGATAGAG ATAAGAATAACGATGATATATTTCTCATTTTAGCACCATTTGGATTGGAC TCCTAAATGACCTCGCTAATTCGAAATTCAAGTGGATTGATAATGATATT TCTGGTTACCGAAACTGGTGTACTGGCACACCACCTGCAGCTGGTGCTAC AGGATGCGTCTTGGTAGATTTTGAGAATGTCGATTGGGATGCACCTGGTT GTTTTAAGCTGGTCCCTTGTACAGAAGGTCATAATTATATTTGTGAATCC AAAGTAAATTATGGGGGTAATGGAATAAAAACACTGGTGCAAGCCTTAAC AACTAATATTCGACAAAGAAGATGTCAATTCTGCAAATAATTTTATTACC ATTATTCACATTGGATTGACACGGATGTGGAGCAAGATTGGTCAAAAAGA GGAAAAGAAAAGAATTTTTTGTTTATATCAGCATAATATAACAATAGGTA CGAAATATGTGTCTGACATGAAACTGGAACACTTAAAAAGAAAAACTTTG AATAAAATAAAATTTGATAATAGAATATGTATCGACGTTCTTTTGCAACT AACACACCATATATATCAAGATGTAATAGTGACTAAAGTATCTCTCAAAA TAATTTGCAGCTGAGACAAAAATGGCTGTAACTTTTGATAGAATTTGAAT CAAGTAAATATTTGGAAAAAGAAAAGAAAAATGAAAATGAAAAATGAAGA AGAGAAAAATCAAGTTCTTTTAGAAATGTGATATGATTACCATTTTTACA GGAGTAATTCTTCAATCTTAGATTATCATCACTGTGAAAGATTTTTTCAA AAATATTCATTCAATCAAAAGATATCAAACATAGTTTATTGCTGGTTGAC TCTATAAAGTAGTAAAAAACGACAAAAAAAAACAGCCTTTTGTCGATCAA CCAATACAAACTTTGTTTGATATCTTTCGATTGAATGAATATTTTTGAAA TATTTTTTCACAGTGATGATGATCTAAGATTGAAGAATCACTCCTGTGAA AGTGGTAGTTATACCACATTTCTACAAGAAGTAGATTTTTTTCTTCTTCA TTTTTTATTTTCATTTTCTTTTTTTCAATTTCTTTTTTGCTTGATAATAT TCCACTCACAAATATCTTTTCAACGAGCACAAAATCGCAACTTGATTCAA GTTCTATCAAAAGTTACAGCCATTTTTGTCTCCAGCTGCAAATCATTTTG AGACAGACTTTAGATCGTCTCGTACCGTCGTACCAAGAGCAATTTTCACA ACTGTTTGATTTAACTGGAATTATGATGTTATTAGAATCATAAAAAAAAC AAAACGGATTTTGTTCGACTTTGAAAAGATGACACGCTCAAAAATTAGGA GGCGGTAAGCAAAAAGAATAGCCAGGTAATAGCGTATATTAGATATTTAT TCACCATTTATAAGTCTATTCTAAAGAAATTGTCGTACTTCTTTGAAAAT TGCTCTTAAGGATAAAGGTGTAATAAGATATAATACCTCGTTTGAAATAT TATCTGAACTGAAGGGGATTGATGTAAGATTGTTGACTTCTTTAAAAAAA ATATGAAAATGAAGAAGCAAAGTGAAAAAAAAGATATGAAAAATCTGAAA AACGTTTTGAAATAAGGAAATGCCATATTTTTCAAATTCGTAAATCATTT ATTTATCAAAATTATATTATTCAGTAATTACTTTAATAGTTTTGATAATA TCATGTTTTCAAACTTTTAACATTTGACAATCTCAGTGTGAAACCGCTGA CAGTAGTGTAATTTTTTAATACTATTTTTAAGTTTTATAAAATCATACAA CCATTATAAAAAAAAATCATTATCTTTTCACCTCATGTTGTTTTGTTTTG TTTTTTCATTTTTTTTTAATAAAGTCTTTGCGATAATAACTTTGCCTAAA AAGGGAGGGGGCGTACGGGGTTTGCAATTTCCGAAATACCGAATAATTTT GCCAAAATTTCCGAAATTCCGTAAAAAAATACTTGCAACTCCGATACTGA TTTTTTTGGTATTTTTCCTCGTTTTGACTAATTTTTCATCAAATTTGATT TTTTATGTATAAATTCCGAAAAAATTTATAATACCGAAATTTTGAAGCAA AAATTCATGGATTTCCGATACCGATACCGATACCGCAACTTTTTCAGAGT TCCTAAATACCGAAGGAATTTTGCCCTTTTTGCAATAAAATATTATCCAA ATTTGAGTAAATTTAGCCCAAAGATTAATCCTTTCGATGCAATTTTTTGG GCCTTTACACATCTTCATTGACTAGTTGTGACGTAAGCGGTCCAATACAT GTAAACTACGTTGTTCTGATTGGTTCTGTCCGTGTTGTTTTCCCGTAAAC ACCGCTGCTATCAGTGGCGGAAGCCTTGGTTGCACTCACATAGTTTTCTT CTTCAGAATTCATTGCATAGAAAAGTCTCGTCAAGTTTGAACAAAAAGCT CTTCAAACTGAGACTACTCAGGTTACGATGGATATTTCCCGTGTTGACCT TCAAAATAGTTAATATGTAAAGTAGGTGGACCTGTTGGCGGACGGTGTTA GTTGGCGGACGAGCGACTTTAAACCGATATAAAGAAAAATTCTTTTCAGA CAAGGAAAACACCATTCATCTACAAGATCTTTTGCTCATATCTTTGAGCA TTACATTTATCTAGTGTCTAGAATAGAAAAAATAACAGGTCAAATAAAGG TTTGTTTTTTTCGCGTTGGTGCAATGCAACATGCTTCATCCCACCAACCT GAAACGCTTTCTCGTGTCTCCACCCCATTTTTCTTTCTACCAATAAAAGT GAATTTGAAAGAGGATGCCGCTCCACAAACTGGGGCTTCCTACTTATTAG CCAATTTGGCAAAAAAAACAGAAAATAAATATCGTACTACATTCGAATAA ACGCCCCTTCTTTGAGGGAAAAATTTTAAAGAACGCCCCTTCAAAAGAAC CCCCCTCCCCTTCGAAATAAACGCCTACTCTTTAAAAGGGGCGTTTATTC GAAACAATTAGCTGTAAGGAAGTAAAGAAAACTTAGATATACGATAGTAA TTGCGTTCTTTTAGTAATCGAACTGAGTTTGACCCGTTTCGACACCGCTA GATAGACATATTTCTACTCAAATCAGGGATATGTTATAGAGAAGCTGGAT AAAGTACGATAATTCCTTTGCGGATTGCTTCTTTGTCTTTTCTATTGTAA ACTGTTCATAATAGAAATCCATCTCTGTCCCCTTGAGTGTTACGTTTTTA TAAGAAAAATAAAGCAGACATTCATGCAGTACGTTTGCACATATTTTGCT ATGATCTTTGTATGTAGCGTATAAAAAATACGATGTTCATTAAAAATACT GTTGTAACTAGAGACTAGAAGGCTAAAAGCTAGTAAAGCCAAGTACGTTC GATCAAATACCGTTGTAGAGTAATATGAGCTTGGCAAAAGTAGACTGAGT GAACGTAGTGCTAGTGGCTTGTGCAAGACCGGTGTAAAACCAAAGTTTGA ATTTAGATTAAGCTATAAAATACTACAAAATTGATACAACTATTGATAAC AACTAATAGAACTAATTCCTCCATGGACAGTAAAATAAAGTACGACCAGA CCATGACGCTAGGTAGGCTGTTAGATCTAGGAAATTAGTAGAGTAAATAC CCAGAAAACTAACAGAAATCTTTTTGAAGTTCATATAAAAACATGTATTT TCGTAAATTTCAATACTGGACTACATATTTGTGGGTCCTAAGAAAATGTT AAAAAGTAAGGTTTCTGCATACTTGTCGAGAGCAGAGAAATGGGATGGAA TAGAAGCGCGATTGGGCAATTGTTAAATAACACATCTTTTTTTATTAGAA CATCTAAAATTTTTGAAGCCTTTTGATGTTCTTAATTTTTTGAGTTTAAA GATTAAAAATGTTCTTAACATGTTCTTATTTGCCCCATGATTTCTTATGA ATTTTTGTCCATTTTCCTTAGAGATAGACTGACTCTGCAAGGCTTTAAAA TGTTCTCAACTTGTTCTTAACATTTTTGTCATCGAAGCCTTATGTTCTTA TATAATTTTTTTTATAAAAAATTTGTAAGAGATAAAGGAGAAGATCGTGA ACTTTTTTGTTCCTATTTTAAAGCAACTTTCAAGCAACAGTGTGAATACA CCCTAAGAACGATTTTGATTCCTCCCACGGAAATTTCTACAACCGAGGGG TAAATCACTCGAAAAGTTATCGTACACCTCTACAAAAAGTCAAAAAAAAA GTCAAAAAAGTCAAAAAAAGTCAAAAAGTCAAAAAAAAAGTCAAAAAGTC AAAGAAAAAGTCAAAAATTCTTAAAAAAAAGTCAAAAAGTCAAATAAAAG TCAAAAAAAGTCTTGAAAAAGTCAAAAAGTTTCTTGAATGGGCGGATGAG TGGAGCAAAATTTATGGGCGGTTAGCGTTTTTGGACAGATTTGGGCGGAA AATCTTAGGCGCCCGAAGGCAGAAATGGAAGTTTGAAAAAAGTCAAAAAA AAGTCAAAAAGTCAAATAAAAGTCAAAAAAAAGTCAAAAAGTCAAATAAA AGTCAAAAAAAAGTCAAAAAGTCAAAAAAAAAGTCAAAAAAAAGTCAAAA AGTCAAATAAAAGTCAAAAAAAAGTCAAAAAGTCAAATGAAAATTCAAAA AGTCAAAAAGTATCATACACCTTTTTTCAAGTATTTACCCCTCGTCTACA ACAAAAAAAACAAATTTTTCTCAAACACAATCACGCAACTTTGTTTTCAT TCCCGGTCCTTTGAAACGAACACAAGATACGAAATCGAGATTGTATATTC GGATTGTTTTGTTTTCATCCATCCTTTTAGAGCTTCAGTGTGGTTGACAG AAAACAATCACGATCTGATCTCAGGCTATCTCAAAGTTACTCAGTTACTA ACACTATCTTTCTTCTTTAAAGCCCAAAGTAACCCCTCTAGTAATTTGTA AGGCTTCCGCATACTTGTTGACAGATTTTTATTTTAATATTAACATCCTT ATGTTATGACAAAGAATATAATTGCTTATCTGATAATTACCGGAGCCGTA AAGCATTCACGTCACTATCAAGTGGCGGGAAAATAAAGACAAGACCGAAT ACACGTATTTCCTATTAGCGGATTCATGTAAAAAAGTCACGAAAAACGTC GAAAAAGTCTCTGATTGGCTGAAATATTGCATATACAAGCATATTTTTCA AAATGTCCAGAGTATGAGGTAATCTTTGCATGCCTCCGCCAATCAAAAGT TTGTTTACTCGACGTTTTTTCGTGACTTTTGCATGAATCTGCTAATAGGA AATAGGTGTATTCAATAGATTGTTAATACATAACAGACGGCAATCGATCA TATCTCCGGGTTGGCTTTACCGAAAACGAGAAAAGATAATCTACCTAACC GGAACATTTTGACAATGTTTTTATGTAATATTTTCTTTGTTTTTCATTTG TTTTCTTAATATTTTCCATTCCTTTTCTTCATTTTCTCAAAGACAACGGT ATAAAAAGGTTAACGAATAGATTTCTGTTATCATTAAACAGAAATCATAC TTTTGAGTGTTGGATTTAAAAAAATATAGCATATACATCAATAATCTATA AAGAAGTGATGATGAAACTAAAAGTTTGGTTTATCAGATTGCTTTTTGTT GCAACCACCTTAAGTTGTCACTTGGAAAATGATTGTGATCATTGTAGTGC TGGTTGCCCCGCAGGGCCACCAGGGCCAATGGGACCTCAAGGATCATCAG GACTGGAAGGAGATGACGGTGTTGCCGGACCTCCAGGCCCTCCATCGACC ATCGCTGGTCCTACTGGCGATCTAGGTGGGGAAGGTCCTTTAGGCCCACC AGGTGCTACAGGAGACAGAGGTGTCAGAGGTAATGCAGGGCCTCCAGGAC CCCCTGGTCCAATAGAACTATGTGGCTGTGGAATCAAAAGTCATTACTTT GTTCCTGAAGGTGCTACTCCAATGCTTTCTTGGCAAGCTGCTCGGGACCT ATGCGAAGCAAATATGGCAAACCTGGTTGGTCTTTACAATACGAGAGAAA ATATATATATTACTGCAAGATTTCTTTCTTTAAAGTAAGTAAACTTTCCC TTTCTTTAGACACTACTGGAAAGTTTTTCGGTTGGAAGAAAAATCCTACC GGGTACGCCGCAAATTCTTTTCCTTTGGACAGGAGTTTCATCAACGGTCG GGAGTATCTCATCTTTGTTGTTTGGTTTTGTTGTTTGGAATTGCTTAGGT CAGGGTTGGTAGTAACGGCTTGTCACTGTGCGGGGTGCATACTCGGCGCC TTGGACCCCTCAGGGTTGCAAGTAACGGCTTGAATTTCAGTCAGGTTAAA AAAGGGGCAATTTTACCCATGTTACAATTACATTACCCCCGTCTTTTTTG TCATTCAATAAGTATTTCCAAATTTGAGTTCTGCTGTGCGAGTGTGGCTC AACGGATAGCGCACTGGGTTTCTGATCAGAAACTCTTTCATTTGGTGGGT TCGAACCCCGGTCGGGTCGATATATCAAGGTTTAAGATAAGTTTAAGATA CTCCCGCCCGTCGATGATACTCCCGACCGTCAATATGAGATACTCCCGAC CGTCGATGATACTCCCGACCGTCAAGATGAGATACTCCCGACCGTCGATG ATACTCGCCACAAAAATGTTTCTCTCTTTAAAGTGAATTTTCCCGAAGTC TAAAATCTTAAAAATAACCAATCCTTTTTCATTGGAAAGAAGAAAAATAA ATTTAAATTTTGATGGGTCATTTATAAAATTTGGTTCATTAGATCAAAAG TTACGCTCAATGGAATAAAAAAGTTACTTTCAGAAAATGCTCAAAAACGT TAAAAATCGACCTATCAAATCTTAATTTTAAAATTGGCCATTACAATAGC CTTCACATGATTAAGAGCATTTTACACCATTTAAAACCACTGTGGTATAA TAGCTATGGTATATCAGGAATTATTCAATGGCTGTTTTATAGCCCCGAGT CCTCTTCGGGTATCTTTTTTTGATTTCCAAAGTCCCGCTAAGGGTTGGAA AAATCAGAAAATCAAATTTCAGTCCAACTAAGGGTCGGAGAAATAGAAAA ATTTCAACTTTTTTACCCCCTGGAAAGATCGAAATTTGGTCGAATTTGTT TCAATAAATAAGGGTCGTGAAATTCGGTAAGGGTCCAAAGGTCGAAAATC GGGGCAGCACAACCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNCCCCCCCCCCCCCGTCAGCTTGCAACCCTAGTACATCCCGCTGGA TTATAGCACGGTAGAACGGTAGAGTTCTTTTTTTCGTCAAAGTTTGCTCT CAAAGTTTGATATTTCACTCTTCTTGTTTATCAAAGAAATTTATTAAAAT AAATCTATTGTTGATTTCGTGAACTAATTTTAAGACTCAAAGAAATTAAG AAACTTATTACGAAAGCAACAAAAATATTCGAACCGGGATTCAAATGTTC GATTATGGGAGTGTTTACATAATTAATGTTTTGTTTTTTTTGCCTCTTGG CATATAATAAAACATATACAATAGGTTTTCGTTGGTTATTGGATCAATAA ATCTCCAATAACCAACTTTTACCTATTTCATATCTGCTTATGGTAGCAAA TTTTTTTTTATCATAGCACTATTTGGATTGGACTCGTAAATGACATCGCT AATTCGGAATTCAGGTGGATTGATAATGATATTTCTGATTACCGAAACTG GTGTACTGGTACACCAGCAACTGGTGCTCCAGGGTGTGTTTTGCNCACTA TTTGGATTGGACTCGTAAATGACATCGCTAATTCGGAATTCAGGTGGATT GATAATGATATTTCTGATTACCGAAACTGGTGTACTGGTACACCACCAAC TGGTGCTACAGGGTGTGTTTTGTTAGATTTTGAGAATGCCAATTCGGATG CACCTGGTTGTTTTAAGCTTGTCCCTTGTACAGAAGATCATGCATATATT TGTGAATTCAAAGTCGATTATGATGATAATGGAATATCACTGGTACAAGC CTTATCAACTAATATTTGGCAACAAAGATGTCCATCTTGCATTGAGTGAT TGGTTTTTCTACTCCAAGCTATAATATGTACCGATTTTTCATATCTCTTT TGGATAAATTCTGAATACACTTTTGAAATAAAAAGATATTGCCACTTTCC GGACTCATAAATGCATTTATTTATCAAATTATATTTAATATTACTTTAAT GTTTGATGATAATCAATTTTCAAACATTTGCCTAGGCATAGAGGGCCTAG GCTACACGCATCCCTCTCACGGCCCACGCCATGAAATTGAAAGCGCCCCC ACCCCCTGAATATAGAGCCTAAGGCGGCGCAACCAGATATTTTTACTTTC CAAAAAAGTGGGGGCCATGGTCCAACTGCAACCCCCAGTGGCGTGGGCCC TCCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGA CGTTGTGAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCAGCTGG

Coding sequence (CDS) from alignment at scaffold_283:75474..85271-

>TCONS_00056825 ID=TCONS_00056825|Name=TCONS_00056825|organism=Clytia hemisphaerica|type=CDS|length=2538bp|location=Sequence derived from alignment at scaffold_283:75474..85271- (Clytia hemisphaerica)
GTGGATTGATAATGATATTTCTGATTACCGAAACTGGTGTACTGGTACAC
CACCAACTGGTGCTACAGGGTGTGTTTTGTTAGATTTTGAGAATGCCAAT
TCGGATGCACCTGGTTGTTTTAAGCTTGTCCCTTGTACAGAAGATCATGC
ATATATTTGTGAATTCAAAGTCGATTATGATGATAATGGAATATCACTGG
TACAAGCCTTATCAACTAATATTTGGCAACAAAGATGTCCATCTTGCATT
GAGTGACACCATTTGGATTGGACTCCTAAATGACCTCGCTAATTCGAAAT
TCAAATGAAAGTTTGGTTTTTCGGATTGCTTTTTGTTGCAATTGCTTTAA
ATTGTGTCATATGCGAGGGAGATGATTGTGATAATGATTGTGATGATGAT
TGCTCTGATGATTGCTCACCAGGGCCATGCGAGGGAGATGATTGCTGTGA
TAATTTGTGTGCTGACGATTGCTCACCAGGGCCACAAGGGCCAGAAGGGC
CACCAGGGGCAGATGGACCTACAGGGCCACCGGGACCTGAAGGGCCACCG
GGACCTGCAGGGGCAGATGGACCTCCAGGACCTCAAGGAGATACAGGGCC
TATGGGACCTCCAGGACCTCAAGGAGATATAGGACCACAAGGTGAGACAG
GGCCTGCAGGACCCCCTGGTCCAATACAACTATGTGGCTGTGGAATCAAA
AGTCATTATTTTGTCCCTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGC
TGCTCAGGACCTATGTGAAGCAAATATGGCAAATTTGGTTGGAATTCACA
ATTTAAAAGAAAATCTATATATTACTGCAAAATATTTTTCTTTGAAGTGG
ATTGATAATGATATTTCTGATTACCGAAACTGGTGTACTGGTACACCACC
AACTGGTGCTACAGGGTGTGTTTTGTTAGATTTTGAGAATGCCAATTCGG
ATGCACCTGGTTGTTTTAAGCTTGTCCCTTGTACAGAAGATCATGCATAT
ATTTGTGAATTCAAAGTCGATTATGATGATAATGGAATATCACTGGTACA
AGCCTTATCAACTAATATTTGGCAACAAAGATGTCCATCTTGCATTGAGT
GACACCATTTGGATTGGACTCCTAAATGACCTCGCTAATTCGAAATTCAA
ATGAAAGTTTGGTTTTTCGGATTGCTTTTTGTTGCAATTGCTTTAAATTG
TGTCATATGCGAGGGAGATGATTGTGATAATGATTGTGATGATGATTGCT
CTGATGATTGCTCACCAGGGCCATGCGAGGGAGATGATTGCTGTGATAAT
TTGTGTGCTGACGATTGCTCACCAGGGCCACAAGGGCCAGAAGGGCCACC
AGGGGCAGATGGACCTACAGGGCCACCGGGACCTGAAGGGCCACCGGGAC
CTGCAGGGGCAGATGGACCTCCAGGACCTCAAGGAGATACAGGGCCTATG
GGACCTCCAGGACCTCAAGGAGATATAGGACCACAAGGTGAGACAGGGCC
TGCAGGACCCCCTGGTCCAATACAACTATGTGGCTGTGGAATCAAAAGTC
ATTATTTTGTCCCTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGCTGCT
CAGGACCTATGTGAAGCAAATATGGCAAATTTGGTTGGAATTCACAATTT
AAAAGAAAATCTATATATTACTGCAAAATATTTTTCTTTGAAGTGGATTG
ATAATGATATTTCTGATTACCGAAACTGGTGTACTGGTACACCACCAACT
GGTGCTACAGGGTGTGTTTTGTTAGATTTTGAGAATGCCAATTCGGATGC
ACCTGGTTGTTTTAAGCTTGTCCCTTGTACAGAAGATCATGCATATATTT
GTGAATTCAAAGTCGATTATGATGATAATGGAATATCACTGGTACAAGCC
TTATCAACTAATATTTGGCAACAAAGATGTCCATCTTGCATTGAGTGACA
CCATTTGGATTGGACTCCTAAATGACCTCGCTAATTCGAAATTCAAATGA
AAGTTTGGTTTTTCGGATTGCTTTTTGTTGCAATTGCTTTAAATTGTGTC
ATATGCGAGGGAGATGATTGTGATAATGATTGTGATGATGATTGCTCTGA
TGATTGCTCACCAGGGCCATGCGAGGGAGATGATTGCTGTGATAATTTGT
GTGCTGACGATTGCTCACCAGGGCCACAAGGGCCAGAAGGGCCACCAGGG
GCAGATGGACCTACAGGGCCACCGGGACCTGAAGGGCCACCGGGACCTGC
AGGGGCAGATGGACCTCCAGGACCTCAAGGAGATACAGGGCCTATGGGAC
CTCCAGGACCTCAAGGAGATATAGGACCACAAGGTGAGACAGGGCCTGCA
GGACCCCCTGGTCCAATACAACTATGTGGCTGTGGAATCAAAAGTCATTA
TTTTGTCCCTGAAGGTGCTTCTCCAATGCTTTCTTGGGAGGCTGCTCAGG
ACCTATGTGAAGCAAATATGGCAAATTTGGTTGGAATTCACAATTTAAAA
GAAAATCTATATATTACTGCAAAATATTTTTCTTTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035799XLOC_035799Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056825-proteinTCONS_00056825-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056825-exon-scaffold_283-1575043694:84642..85271TCONS_00056825-exon-scaffold_283-1575043694:84642..85271Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1575043694:84041..84088TCONS_00056825-exon-scaffold_283-1575043694:84041..84088Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1575043694:75474..76178TCONS_00056825-exon-scaffold_283-1575043694:75474..76178Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1510915933:84642..85271TCONS_00056825-exon-scaffold_283-1510915933:84642..85271Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1510915933:84041..84088TCONS_00056825-exon-scaffold_283-1510915933:84041..84088Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1510915933:75474..76178TCONS_00056825-exon-scaffold_283-1510915933:75474..76178Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1491911889:84642..85271TCONS_00056825-exon-scaffold_283-1491911889:84642..85271Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1491911889:84041..84088TCONS_00056825-exon-scaffold_283-1491911889:84041..84088Clytia hemisphaericaexon
TCONS_00056825-exon-scaffold_283-1491911889:75474..76178TCONS_00056825-exon-scaffold_283-1491911889:75474..76178Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_283supercontigscaffold_283:75474..85271 -
Expression

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min expression (0 tpm) - - (0.170808 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0.020195 0 0 0 0.0316287 0 0 0 0 0.170808 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR008160Collagen
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056825 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20040060080010001200Sequence
Match NameE-valueIdentityDescription
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