TCONS_00056912 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056912
Unique NameTCONS_00056912
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1037

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056912 ID=TCONS_00056912|Name=TCONS_00056912|organism=Clytia hemisphaerica|type=transcript|length=1037bp
gaattttaagcgtACACAGATTTACAGACTTTTCTTATCATGATGATAAC
TAGCAACTTTGGGGTTTTTTTCTTAGGAATTGTCacgtttttcttcaaaa
acttaCTTTCCAGTAATGTGCAGTCAGCATGGAGTGATGTTGGAAGGTTG
AGTTTGACACCAACAATATGGACAATTTAAATTTTGCTGCAATGAATTTC
GATGTGCTTGAAAGCGTCTACCAGACATTTCGCACCTCAAACAGCGCTGG
AGACCTTCTAACCACATTTCTGAACGGTGAATTCGAACGTCAGTTTGAGA
ACTCTGATGAGGTTGTAAAAAATTTCGTTAACGACACATTACCGTGTATG
ATCAATATCACTCGTATTCATATCAATGAAACGATGCGGGCCGTGACACA
AAGTTTATGGACGAATTGTTTGGAATCAGAtgtaaaagatttttattgTG
GTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTCACTCGCC
tTGGTGTTATTGATTCTGTTAACGTTAggtaaatcaagaaaaagttttaa
attgggTTGCTGTTTTGGACGACCTGCTCCTGTTGTTCCACTAAACATGC
TGGACAACTACGAAAATCGATATGCATACATGTTTGCTTTTGGTGTTACG
GTGAACTCATGCGTAGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGG
TGAAAGTAATGCATCAGAATTGAATGCACTACCACCATATTTTTCAATCA
TCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCATATCCCTTC
TTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATTAATTGGGTT
CTGTTATACTGCATTTTAGTAAGTATATTAATAATTTAATATTTCTAGTC
TCTTATTTattacaccctcttctcacagacccactgggaccccttcccac
tggaaaaattgtccaaaatatcgtccccagtggaaaattatcctccaata
tttgtcccactgaaaataatcaactaaaccaatcctc
Run BLAST on NCBI

protein sequence of TCONS_00056912-protein

>TCONS_00056912-protein ID=TCONS_00056912-protein|Name=TCONS_00056912-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
MDNLNFAAMNFDVLESVYQTFRTSNSAGDLLTTFLNGEFERQFENSDEVV
KNFVNDTLPCMINITRIHINETMRAVTQSLWTNCLESDVKDFYCGVDNLE
ATMRLILVSLALVLLILLTLGKSRKSFKLGCCFGRPAPVVPLNMLDNYEN
RYAYMFAFGVTVNSCVDVLFGDYKGIVGESNASELNALPPYFSIIIKVAL
AAFICIIAYPFFIAHNLRNRLLGSLIGFCYTAF
Run BLAST on NCBI

transcript from alignment at scaffold_284:51847..58634-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056912 ID=TCONS_00056912|Name=TCONS_00056912|organism=Clytia hemisphaerica|type=transcript|length=6788bp|location=Sequence derived from alignment at scaffold_284:51847..58634- (Clytia hemisphaerica)
GAATTTTAAGCGTACACAGATTTACAGACTTTTCTTATCATGATGATAAC TAGCAACTTTGGGGTTTTTTTCTTAGGAATTGTCACGTTTTTCTTCAAAA ACTTACTTTCCAGTAATGTGCAGTCAGCATGGAGTGATGTTGGAAGGTTG AGTTTGACACCAACAATATGGACAGTAAGCTTTTTAATTTTATGTCTTTT TTTCTTAATTCTCTACTTTTTCCTTTGGGCTATAAACCCAATGTCCAAAG TCAGCTTAGCCTACACCCTTTTAACCTAAGATTACACTTTTTCTTTCATT CCGACCCTTACAGTTACAGTGCACTTTGGTTAATCTAATACCTTATCGGG GAAAACTTCGTCGGGGAAAATTTTTGTCGGGGAAAAATATTCGTCACTTG GCCAAAATTTCGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGGTAAC AGCTGTTCGTAATTTTCTTACGCGCACGGTAAACTTCTGAAGGCGCTTGA AAATTATACAGCTGAGGAAAATAGTCCTCCGCGGAAAATTCTACAACAAC AATCTTGTTGTGTGCCGGAAAAATAAAAACTGATACGGTGTCCTATTCAT AAGCACAATCACGCAACTTTGTTGTCGTTCCTAGTCCTTTTAGACGAGCG CAGTCCTTACGATTCCGAGATTGCATATTCGTCAGATTGTTATGTTTTCA CCATCCCTTTAGAGCTTCAGCGTAGTGTGCAGAAAACATTCACAATCTGA TTTTAGGTTAATTTTGGTAGAGTTTTCAGCCTGAAAATGTACCCTTAAGG TCGCTCACCTTGAGTGCACACCTCCACTCTAAGTTAGCTCTAATACGTGA AGAGCTTTTTCTGTTTTCCCCATTTTAACGAGTTCCCCCCAGCGGTTTGC GTGATGGCGTGATTGGGACTTTTTTCTTGTATGATGGCGTGATTAGAGAT TTTTTGGCGTGATGGCGTGATATGGCTAAAATTTGAGGCGTGATGCATGG TCTGGGCTATTTTTCGCTATTTTTTGCGTGATGACAAATTTCAGCAATTT TCGTGATGCGTGATGGAGAACATTTTTTTGCGTGATGTTGTGACTAGGGG TGCCGCTGGGGGGCGGGGGCTCTTTAATAGCCGTCTCACAGCCCCAGTGA AACTTTTTCCCACAATGGGGATAAAAGATATTCTATTTTTCAAAGGTTGA AAAATCCAGTGAGGATGATTTTTGAGTGCAATTTTTAGGCATTGAATTTC GAATTGGGATGCAATCAAAATTTCCTAGTGGGGCTGAAATTCTATTCTGG TATTTTTCCCGCCGGCGACCAAATTTTTGCCAAATTTTGTACTGTATGTG TATTTTATTGCAATGCACTCTTGTTGAACCTTTTTCAGAAATTCCATATA CAGTATTCTGTCTGAATTCGATGTCATACTTGTCAATATTCGTCATATAA ATTACATACATAATGCTTGCAATGTGAATTTTTATGTGGCAAATTTTAAT GACTTCCTAGTATTTCAGTATTTAGCTTACTCTTCAAAAACTTTATTTTT TTATTAGAACAAACTATAAGAACTTAAGAAATCGATGGCCATTCAAAATG TTAAGAACAAGCTAAGAACATTTTAAGGCTTTTCAAACTCTAAAACAACC ATTTTCTTAGGAAATGACACAAAAATACTCACAAAAAAAATAAAAATAAG AACATGGTAAGAACATTTCAGGCTTGAAACTCAAAAAGTTAACATTCGAA GGCTTTAAAAATTTTGGACGTTCTTTTAAAAAAACGTGTATCAGTTTCAA TAGATTTATTCTTATCGTTGGATAATTGTCCAACCGTTTGTCTGTTTTAT AATCATCATGGATCAATCGTTTCTCGTAATTAAATCTTTTTACGAAAAAG CTTACTGAAACACTTACACATTTTTTTCTATAAGAACATCTAAAATTGTT AAAGCCTTGGGATGTTCTTAACTTTTTTTTAAGAAATCTGGTGTCTTTTT TCCACAAAGCCTTAAAATGTTCTTAACTTGGTCTTAAGATCTTAACACAT TGCAGCGAAGGCTTATGTTCTTATATATTTGTTCTTATTTAAAAAAACTC CCTTGATACTTTCACCACTCTTAGCAGTTGGGAAAATACCCTGGAAAATT GACTTTGATTTCATCCCCATTTGAAATTCAATGTTTTAAAATTGCACTTC AAAACCATTCCCGCTGGATTGTTTTACCCTTGAACGATAGAATTTCTGAC CCCATATTGGAATTCATTATTTTTTTATTTTGGAAAATAAGAACATGTTA AGAACATTTTTAGATTTGAAACTTAAAAAGTTAAGAACATTGAAAATTAG AGCAAACTCGCCAAAGAGAGACAAATTATTAAGTGACATGATCTATCTAG TAGATTTAAGGCTGATTTAGAGATAAACTACCTTGCTAAAACATTCCAAA AGATTGCACATAGATATATGCGCAATAAATGTTCTTATTACTAATTCAAG TTAATTTCTTATACTAAAACCTCTACCAATATAATTTACATAAGCGTTGT TAATTGACATCCATCTCTCAGTTCATATAAGTGATAGCTAAGCAAAGATT TGAATATGTTTTTGATTGACCTTTGGATCAGATGTTGCTTACATGTCTGT ACACAATTATGAAAAGAGTGTTGTGGCATTTTATCTAGAAATTTTATTGA TTTATCCTCATTGAATTTTGTTAATAAAAATTTAGTTTCAAGTAGAAATC TAGAGGGTANAAATTTTATTGATTCTTCCTCATTGAATTTTGTTAATAAA AATTTAGTTTCAAGTAGAAATCTAGAGGGTAACTATCTTTGGGACAAGCT GGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATA AAACAATTTTGTTACTTTTTCTAAAGAATGTGTCATCTAGATCTTGATTC AAATGACCAATTAGTGAAGTATCTTGTAAAAACTCCATCCCGTCCCAATT CGTTCCATATGTTCTAATGAAATAAAGTCCAATATTTTTATTGGGTTTAT TGGGGTTAACAAGCCCGGGGAAGCACTTAGACAAAATTGGGTAAGGGGAC TTGCCGCTGGCCAGGGTGCCTTATTAGGCTCTGAAGATATCTGACAAGGT CCCAAATTTACTAATTTTCAAGTATTGTATCTGGCAGTGTGGAAATTAGA AGAAAATTCAGTTTCCTCTTTTTTTATCCACTTTTCAAACTGCAGCGGCA CGGCCCCGTCGATCGTTAAGTTCAGTATCTGCCATGCGAGGCTACAAGGC AGTTGCGGGATGTTTTTTTGCGCTATTAGAGAATTAGCGACGATCGCTTA GGTTAAAATCATGAGTGAAATAATTTTTTCAACTTTTTTTCTAGATTTAA ATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGCGTCTACCAGACATTT CGCACCTCAAACAGCGCTGGAGACCTTCTAACCACATTTCTGAACGGTGA ATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTGTAAAAAATTTCGTTA ACGACACATTACCGTGTATGATCAATATCACTCGTATTCATATCAATGAA ACGATGCGGGCCGTGACACAAAGTTTATGGACGAATTGGTAAGTTTTAGT ACGCGTTTTTATGAGAATAAACTATATAAGAACATGACTCTAAAGCACCA CTTCTAAAAAAATGGAATTAAACAATTAAGAGCATCTGAAGTCTTCAAAA ATTTTGAATGTTCTTATAAAAAACGTATTTATTAGTTTTGAGTTTTTTCA GAGCAAGATGTTTTGCTCAGTCGAAACCAAACGTCCGACTACTTTCGCGG GCAGAAACTTTCGCGTTTTTCGCGTTTTTGGCATTTTTTCACGGGAGTTT CTGCCAGGCAAGAAATTAAACAAGAAATTCGCGAAAGTTAATTTTGTGAA AAATTAAATTTTCTTAAAAATCGCGAAAGTTTTTCACAAGCCGAGGAGAG TCAATTTTATTGATATTATCGCAGTGACTAGGATTTGGAATGGGAGGAAG AAGTGCAAATAGTTTATTTTTCATTTATTAGAAGAAAAAAAAAATGAAAT TTGAAATAATTTTTTATTCACATTCCCTAGCCACTCTCGAAAGTTATTGC TACTAAGATTGAACATTCACAAGAAACTGCGGAAGTTTCTTCCACAAATT TTCTTCAAAAAGTAAAAATCGCAAAACTACCGCCCTTAAAGTAATGTTTT TTAAACGTTGAGAAAACGTTAGATGAAGGTAATATGAAAAATGCCCTGAA GCCATCATAAATGCTTGCATTTGCTTCACAGACAGAATACACCTATTCAA CCCTTAAAGGCGTGATTGGACTTTAAGGGGGTTATAATGAATTCATGTAG GCCAAATTTATTTCCCATGAGAATTTTGGCAACTAAAGTCTATTCACGAT AAGTGTGCACTCTTTTTTCATTTACCTATAACTTTTGAAGGAATTCTTTA ATCTTTATAAATTTGGTATCATTGGAAAGATATTAGTGAGTGGAACAATT TGAAATAAAAAATACTTTAAAAAGATTATAAAAATGAAGATCAAAATGAA GAAGAAAAAAATGACGAACTTGTAGAAAAGTGCTATAACTATATGAGGGG AGGGGTGCGTGCAGCCTACTAATTTAGATATTTTGACGTCATTATTTCCT GTTAAACTCGAACCTAGTCTTCACACGCTTTAAAGGTTGATATGTGTATT CCATAACAATTACTTCTTTCTTCAGTTTGGAATCAGATGTAAAAGATTTT TATTGTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTC ACTCGCCGTAAGTGCTATCTCTTTTATCAGACGCAAATCTGTGCTTTTTC TGGCTTCTGTTTTGTTCATTTCTTGACGGAGACGTTCCTTACAGGAAGTG CAGGTCTGAAAATCGCACTATTTAGGTGTAAAATCTTTGCGAATCAAGAC AACTTTTGTCTTTTGACTTATGCAACCTGCTGAATAATGCAATAAATCTT ACATTTTATCTTGTTTAAGTTATAAATTATGAGTTTTACAGACTTCCTAT TCTGACGAAAATTTTTCGCGAGCTTAAACTTTCCCGAAAAAGGCTGAAAT TCGCGAAAATCGTGAAAAAGCTTGTACGCTTAAAATACTATAGTACTATA GAAAAAACTGAGAAGCTACATTGGTTAAGCCTACGGTCCAGGGGTAGGAT TTTTATAAAATTTCTTAATTCTTTTATCACATTTACTTGTGGTAAAACCG GCACAGTGCACCCTGGTTGCCGAATACCCGTGATTGACCCACTAATAGTG GTGTTTACTAAGAAATTCGACCAAAATCGTATATAGCTGGCTCCGGTCAC GATATGTATATACAATCTAGAGGGCTAAATGACATAAGACACCTCCGGGA ATCGAACCCAGGCTAATCGCCTGGTGACACAGTGGTTCTGCGCCTATCTG ACCAACGTAAAGCCAGCCCTCACGTAAAGAAACCTTATGTTTTCATTTTT TATAGTTGGTGTTATTGATTCTGTTAACGTTAGGTAAATCAAGAAAAAGT TTTAAATTGGGTTGCTGTTTTGGACGACCTGCTCCTGTTGTGTAAGTTAA TGAAGTATCCTTATTTGGTGAAAGAAGTTTAATTTTTGAGATTCTAATAT AGGAGTTGAGTTTTTTTTCCTTAAACCTTACAAGATATACAACATCAACA ATCCTAGTTCGAACTATGAGAAATCTGTTGAACTAAGGAGGTTAGCAAAC AACCCATTTTATTTACTCAACCTTTTTTTCCCAAATTAATTTTCTTTTTC ATTATTCTGGATATCATAATATTAGATTAACTCATTGGCAGATTAAGGAG AAGTTGGGCCGTCAATTTTTGGAGTATCCTCTAATAAAGAATTCATTGTT CCTTCAATAGTCCACTAAACATGCTGGACAACTACGAAAATCGATATGCA TACATGTTTGCTTTTGGTGTTACGGTGAACTCATGCGTAGACGTTCTGTT CGGTGATTACAAGGGCATTGTGGGTGAAAGTAATGCATCAGAATTGAATG CACTACCACCATATTTTTCAAGTAAGAAATCTAATAGCTATCTAAACATA AACTTTCTAAATGTGAACAACAAGCTCTTGTTTCCTCGTCCTAGAGTCGG AGAAAGATAGCAAAACCCATTCTTCAAGTCTTCAACCAAAGAACAGGATT AGATCCCTTAACGTAGTTTTTCCCTTTTGTCATCTTCTTAACAAAAACTA TTTTTCCAGCCCAAGTTCACCTAGCAAAGCTCTTTAGTCTATTTTTTATA TTGACTGACAAGAAGTTCAACGTTATAATAACGCCATAATTGTAAGAAGG GTGGGTTAGAGGGCGGGTTAGAGGGCCGGTGTGTGTCTAACTGTAAAACA TTTATATAACATTTCATACCATCGATATATCTTTCGTTCTTTTCTTAGTC ATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCATATCCCTT CTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATTAATTGGGT TCTGTTATACTGCATTTTAGTAAGTATATTAATAATTTAATATTTCTAGT CTCTTATTTATTACACCCTCTTCTCACAGACCCACTGGGACCCCTTCCCA CTGGAAAAATTGTCCAAAATATCGTCCCCAGTGGAAAATTATCCTCCAAT ATTTGTCCCACTGAAAATAATCAACTAAACCAATCCTC

Coding sequence (CDS) from alignment at scaffold_284:51847..58634-

>TCONS_00056912 ID=TCONS_00056912|Name=TCONS_00056912|organism=Clytia hemisphaerica|type=CDS|length=4212bp|location=Sequence derived from alignment at scaffold_284:51847..58634- (Clytia hemisphaerica)
TCATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCATATCCC
TTCTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATTAATTGG
GTTCTGTTATACTGCATTTTAGTCCACTAAACATGCTGGACAACTACGAA
AATCGATATGCATACATGTTTGCTTTTGGTGTTACGGTGAACTCATGCGT
AGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGGTGAAAGTAATGCAT
CAGAATTGAATGCACTACCACCATATTTTTCAATTGGTGTTATTGATTCT
GTTAACGTTAGGTAAATCAAGAAAAAGTTTTAAATTGGGTTGCTGTTTTG
GACGACCTGCTCCTGTTGTTTTGGAATCAGATGTAAAAGATTTTTATTGT
GGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTCACTCGC
CATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGCGTCTACCA
GACATTTCGCACCTCAAACAGCGCTGGAGACCTTCTAACCACATTTCTGA
ACGGTGAATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTGTAAAAAAT
TTCGTTAACGACACATTACCGTGTATGATCAATATCACTCGTATTCATAT
CAATGAAACGATGCGGGCCGTGACACAAAGTTTATGGACGAATTGATGGA
CATCATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCATATC
CCTTCTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATTAATT
GGGTTCTGTTATACTGCATTTTAGTCCACTAAACATGCTGGACAACTACG
AAAATCGATATGCATACATGTTTGCTTTTGGTGTTACGGTGAACTCATGC
GTAGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGGTGAAAGTAATGC
ATCAGAATTGAATGCACTACCACCATATTTTTCAATTGGTGTTATTGATT
CTGTTAACGTTAGGTAAATCAAGAAAAAGTTTTAAATTGGGTTGCTGTTT
TGGACGACCTGCTCCTGTTGTTTTGGAATCAGATGTAAAAGATTTTTATT
GTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTCACTC
GCCATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGCGTCTAC
CAGACATTTCGCACCTCAAACAGCGCTGGAGACCTTCTAACCACATTTCT
GAACGGTGAATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTGTAAAAA
ATTTCGTTAACGACACATTACCGTGTATGATCAATATCACTCGTATTCAT
ATCAATGAAACGATGCGGGCCGTGACACAAAGTTTATGGACGAATTGATG
GACATCATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCATA
TCCCTTCTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATTAA
TTGGGTTCTGTTATACTGCATTTTAGTCCACTAAACATGCTGGACAACTA
CGAAAATCGATATGCATACATGTTTGCTTTTGGTGTTACGGTGAACTCAT
GCGTAGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGGTGAAAGTAAT
GCATCAGAATTGAATGCACTACCACCATATTTTTCAATTGGTGTTATTGA
TTCTGTTAACGTTAGGTAAATCAAGAAAAAGTTTTAAATTGGGTTGCTGT
TTTGGACGACCTGCTCCTGTTGTTTTGGAATCAGATGTAAAAGATTTTTA
TTGTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTCAC
TCGCCATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGCGTCT
ACCAGACATTTCGCACCTCAAACAGCGCTGGAGACCTTCTAACCACATTT
CTGAACGGTGAATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTGTAAA
AAATTTCGTTAACGACACATTACCGTGTATGATCAATATCACTCGTATTC
ATATCAATGAAACGATGCGGGCCGTGACACAAAGTTTATGGACGAATTGA
TGGACATCATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCA
TATCCCTTCTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATT
AATTGGGTTCTGTTATACTGCATTTTAGTCCACTAAACATGCTGGACAAC
TACGAAAATCGATATGCATACATGTTTGCTTTTGGTGTTACGGTGAACTC
ATGCGTAGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGGTGAAAGTA
ATGCATCAGAATTGAATGCACTACCACCATATTTTTCAATTGGTGTTATT
GATTCTGTTAACGTTAGGTAAATCAAGAAAAAGTTTTAAATTGGGTTGCT
GTTTTGGACGACCTGCTCCTGTTGTTTTGGAATCAGATGTAAAAGATTTT
TATTGTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTC
ACTCGCCATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGCGT
CTACCAGACATTTCGCACCTCAAACAGCGCTGGAGACCTTCTAACCACAT
TTCTGAACGGTGAATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTGTA
AAAAATTTCGTTAACGACACATTACCGTGTATGATCAATATCACTCGTAT
TCATATCAATGAAACGATGCGGGCCGTGACACAAAGTTTATGGACGAATT
GATGGACATCATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTG
CATATCCCTTCTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCA
TTAATTGGGTTCTGTTATACTGCATTTTAGTCCACTAAACATGCTGGACA
ACTACGAAAATCGATATGCATACATGTTTGCTTTTGGTGTTACGGTGAAC
TCATGCGTAGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGGTGAAAG
TAATGCATCAGAATTGAATGCACTACCACCATATTTTTCAATTGGTGTTA
TTGATTCTGTTAACGTTAGGTAAATCAAGAAAAAGTTTTAAATTGGGTTG
CTGTTTTGGACGACCTGCTCCTGTTGTTTTGGAATCAGATGTAAAAGATT
TTTATTGTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTT
TCACTCGCCATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGC
GTCTACCAGACATTTCGCACCTCAAACAGCGCTGGAGACCTTCTAACCAC
ATTTCTGAACGGTGAATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTG
TAAAAAATTTCGTTAACGACACATTACCGTGTATGATCAATATCACTCGT
ATTCATATCAATGAAACGATGCGGGCCGTGACACAAAGTTTATGGACGAA
TTGATGGACATCATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCAT
TGCATATCCCTTCTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGAT
CATTAATTGGGTTCTGTTATACTGCATTTTAGTCCACTAAACATGCTGGA
CAACTACGAAAATCGATATGCATACATGTTTGCTTTTGGTGTTACGGTGA
ACTCATGCGTAGACGTTCTGTTCGGTGATTACAAGGGCATTGTGGGTGAA
AGTAATGCATCAGAATTGAATGCACTACCACCATATTTTTCAATTGGTGT
TATTGATTCTGTTAACGTTAGGTAAATCAAGAAAAAGTTTTAAATTGGGT
TGCTGTTTTGGACGACCTGCTCCTGTTGTTTTGGAATCAGATGTAAAAGA
TTTTTATTGTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTG
TTTCACTCGCCATTTAAATTTTGCTGCAATGAATTTCGATGTGCTTGAAA
GCGTCTACCAGACATTTCGCACCTCAAACAGCGCTGGAGACCTTCTAACC
ACATTTCTGAACGGTGAATTCGAACGTCAGTTTGAGAACTCTGATGAGGT
TGTAAAAAATTTCGTTAACGACACATTACCGTGTATGATCAATATCACTC
GTATTCATATCAATGAAACGATGCGGGCCGTGACACAAAGTTTATGGACG
AATTGATGGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035854XLOC_035854Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056912-proteinTCONS_00056912-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056912-exon-scaffold_284-1575043694:58461..58634TCONS_00056912-exon-scaffold_284-1575043694:58461..58634Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1575043694:54997..55240TCONS_00056912-exon-scaffold_284-1575043694:54997..55240Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1575043694:53778..53859TCONS_00056912-exon-scaffold_284-1575043694:53778..53859Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1575043694:52994..53079TCONS_00056912-exon-scaffold_284-1575043694:52994..53079Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1575043694:52514..52674TCONS_00056912-exon-scaffold_284-1575043694:52514..52674Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1575043694:51847..52136TCONS_00056912-exon-scaffold_284-1575043694:51847..52136Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1510915933:58461..58634TCONS_00056912-exon-scaffold_284-1510915933:58461..58634Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1510915933:54997..55240TCONS_00056912-exon-scaffold_284-1510915933:54997..55240Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1510915933:53778..53859TCONS_00056912-exon-scaffold_284-1510915933:53778..53859Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1510915933:52994..53079TCONS_00056912-exon-scaffold_284-1510915933:52994..53079Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1510915933:52514..52674TCONS_00056912-exon-scaffold_284-1510915933:52514..52674Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1510915933:51847..52136TCONS_00056912-exon-scaffold_284-1510915933:51847..52136Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1491911889:58461..58634TCONS_00056912-exon-scaffold_284-1491911889:58461..58634Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1491911889:54997..55240TCONS_00056912-exon-scaffold_284-1491911889:54997..55240Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1491911889:53778..53859TCONS_00056912-exon-scaffold_284-1491911889:53778..53859Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1491911889:52994..53079TCONS_00056912-exon-scaffold_284-1491911889:52994..53079Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1491911889:52514..52674TCONS_00056912-exon-scaffold_284-1491911889:52514..52674Clytia hemisphaericaexon
TCONS_00056912-exon-scaffold_284-1491911889:51847..52136TCONS_00056912-exon-scaffold_284-1491911889:51847..52136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:51847..58634 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (5.50089 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0620619 0.146433 0 0.163006 2.1137 1.20162 2.42185 3.36725 3.20054 4.3332 3.90817 2.25566 4.30892 5.50089 3.48576 4.66516 1.27522 2.51381 4.38878 4.21785 2.88112 3.12173 0.522269 0.746429 1.60164 1.92744 2.51136 2.1501 1.0029 0.792844
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056912 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
1002003004005006007008009001000Sequence
Match NameE-valueIdentityDescription
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