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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056856 ID=TCONS_00056856|Name=TCONS_00056856|organism=Clytia hemisphaerica|type=transcript|length=766bp
CAATTATCGAAATTCGATTAAAATATAGagaaattcgattatttaagcga
aatatttttctcaaataatcGAATTGGttcgcttaaataatcgaattgGT
TCACTTAAATAATCGAAGTTCTTGTTGAAAATGATAGAATATTTCGCTTA
AATTCGATTAAATAAtcgattttatttttgagaagatccctaaagTAGTC
TTTATTTTGGTTTAATTGAGATAGGGGTGTAGAAGAATCATTCAACTCGT
CCAAGGTACGAAATCCCAGATCTTCTTTACTCGGAGCTTCTCCGCTTAGT
AATGCCCCCGTCTTTCTATCGCTGTTTTTGCGAATGTTCCCTTATCGTTA
TAAAAAAGCCAAACCAATTATGAATTTGCATGTGTGAGAAATAATCGTAA
TTCACAAATTGATCCGTCTTTTGTCTACAACAACGCACTCCATCGTTGCG
CCATTTTTTAATTATGCTATTAAAATTtgttgaaatcaaatttttttcat
gtgaTAGAGTTGGCGCGTGTTCAGTATGTTGTTGTTATGAAATTAGCACC
GTTGCAAGTTGTGgactttgaagaaaatcttttggtcATCTTTGGATTAA
CGACGTTTTCGATTGAAGTTTCTGTTTGGATCAATGTATTGTAATTAAAA
AGGAATAAGGTAGAAGCttattttgtgaaagtttcatTGCTATAACTTTT
CTAggttaaaagatatagcatcgtTTAGTCAAAAAACGCTGTTTTTCGTT
GCAAGTTATGGCCGTT Run BLAST on NCBI transcript from alignment at scaffold_284:318172..319039+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056856 ID=TCONS_00056856|Name=TCONS_00056856|organism=Clytia hemisphaerica|type=transcript|length=868bp|location=Sequence derived from alignment at scaffold_284:318172..319039+ (Clytia hemisphaerica)
CAATTATCGAAATTCGATTAAAATATAGagaaattcgattatttaagcga
aatatttttctcaaataatcGAATTGGttcgcttaaataatcgaattggT
TCACTTAAATAATTGAATTTCATGTTGAAAATAATCGAATATTTCGCTTA
AATTCGATTAAATAAtcgattttatttttgagaagatcccttagCGAANG
GTTCACTTAAATAATCGAAGTTCTTGTTGAAAATGATAGAATATTTCGCT
TAAATTCGATTAAATAAtcgattttatttttgagaagatccctaaagTAG
TCTTTATTTTGGTTTAATTGAGATAGGGGTGTAGAAGAATCATTCAACTC
GTCCAAGGTACGAAATCCCAGATCTTCTTTACTCGGAGCTTCTCCGCTTA
GTAATGCCCCCGTCTTTCTATCGCTGTTTTTGCGAATGTTCCCTTATCGT
TATAAAAAAGCCAAACCAATTATGAATTTGCATGTGTGAGAAATAATCGT
AATTCACAAATTGATCCGTCTTTTGTCTACAACAACGCACTCCATCGTTG
CGCCATTTTTTAATTATGCTATTAAAATTtgttgaaatcaaatttttttc
atgtgaTAGAGTTGGCGCGTGTTCAGTATGTTGTTGTTATGAAATTAGCA
CCGTTGCAAGTTGTGgactttgaagaaaatcttttggtcATCTTTGGATT
AACGACGTTTTCGATTGAAGTTTCTGTTTGGATCAATGTATTGTAATTAA
AAAGGAATAAGGTAGAAGCttattttgtgaaagtttcatTGCTATAACTT
TTCTAggttaaaagatatagcatcgtTTAGTCAAAAAACGCTGTTTTTCG
TTGCAAGTTATGGCCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056856-exon-scaffold_284-1491911889:318172..318269 | TCONS_00056856-exon-scaffold_284-1491911889:318172..318269 | Clytia hemisphaerica | exon |
| TCONS_00056856-exon-scaffold_284-1510915933:318172..318269 | TCONS_00056856-exon-scaffold_284-1510915933:318172..318269 | Clytia hemisphaerica | exon |
| TCONS_00056856-exon-scaffold_284-1575043694:318172..318269 | TCONS_00056856-exon-scaffold_284-1575043694:318172..318269 | Clytia hemisphaerica | exon |
| TCONS_00056856-exon-scaffold_284-1491911889:318372..319039 | TCONS_00056856-exon-scaffold_284-1491911889:318372..319039 | Clytia hemisphaerica | exon |
| TCONS_00056856-exon-scaffold_284-1510915933:318372..319039 | TCONS_00056856-exon-scaffold_284-1510915933:318372..319039 | Clytia hemisphaerica | exon |
| TCONS_00056856-exon-scaffold_284-1575043694:318372..319039 | TCONS_00056856-exon-scaffold_284-1575043694:318372..319039 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:318172..319039 + |
Blast
The following BLAST results are available for this feature:
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