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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056872 ID=TCONS_00056872|Name=TCONS_00056872|organism=Clytia hemisphaerica|type=transcript|length=695bp
ACACTTGATGCATTCTCATTGGTTATTCTGTGTCAATACGGTTTGTTAAG
TCAGGAAATATATTCGAAAGAGAGTTATTATCTTTATCCAGTCAAATCAA
GCCTTAAGAAGAAGTAAAGCTACAAGATTTTATAAATTCTTCATTCATCA
TCAAAGGAAAAGATGAAGCTTTCAATCGTATTGATGTTGTCATTCTGTTT
GTTCTTACAAACACAAGCCAACGAAGACATCCCAAGCAGGNGTCATTCTG
TTTGTTCTTACAAACCCAAGCCAACGAAGACATCCCAAATAGCAATGAAG
TTTCTGAAAAACAAAACGATCCATGGCTTCGTGGAGGATGTGTCTGGGAT
TTCTGTGCCTGGCCTTTTAAACGATGCTGCCCTGGAACCAACAAAAACCA
ATATGTATACTGTTTGGCTGGTAAATGCTTAAGAATAGATAATAAAATGT
CAGGTTGAGAAGCATATTTATTCACAACCAcctatatattatttttgtta
gaaaatttagttttgtgGATTTTTACATGAGAATTTCTCGACAATAAATT
GATACATGAAAGATTGAAGTGATTGAAAGATTAAAATGTATCacattatt
tcattatttttacgAATAATCTTTATTTCCTTCTTCTTAATGTTAATTAA
ATTCTCTCAAAAAACCAGCGGTCTTTCTGGTATAGTTTTTGTCTG Run BLAST on NCBI transcript from alignment at scaffold_284:746769..747709+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056872 ID=TCONS_00056872|Name=TCONS_00056872|organism=Clytia hemisphaerica|type=transcript|length=941bp|location=Sequence derived from alignment at scaffold_284:746769..747709+ (Clytia hemisphaerica)
ACACTTGATGCATTCTCATTGGTTATTCTGTGTCAATACGGTTTGTTAAG
TCAGGAAATATATTCGAAAGAGAGTTATTATCTTTATCCAGTCAAATCAA
GCCTTAAGAAGAAGTAAAGCTACAAGATTTTATAAATTCTTCATTCATCA
TCAAAGGTATGTAActatgaaatattttgaaatatttttttaagaagtGT
GTAAAGATGATTTTGTATCTGGAGGTTAAATAAAGGAACAAAATGCAACA
TGTCAATGACGATTTTAATGGATGGGGATGGAGTTTGGTAAAAATCAAGC
AATAAGGATTAAACCTCTGTAATCGGACTTTGGAaccaaaaattttccat
tctTGTATTAATGTTCAGGTTATTATATTCTTTCTCTCTTGTTAATTTAC
AGGAAAAGATGAAGCTTTCAATCGTATTGATGTTGTCATTCTGTTTGTTC
TTACAAACACAAGCCAACGAAGACATCCCAAGCAGGNGTCATTCTGTTTG
TTCTTACAAACCCAAGCCAACGAAGACATCCCAAATAGCAATGAAGTTTC
TGAAAAACAAAACGATCCATGGCTTCGTGGAGGATGTGTCTGGGATTTCT
GTGCCTGGCCTTTTAAACGATGCTGCCCTGGAACCAACAAAAACCAATAT
GTATACTGTTTGGCTGGTAAATGCTTAAGAATAGATAATAAAATGTCAGG
TTGAGAAGCATATTTATTCACAACCAcctatatattatttttgttagaaa
atttagttttgtgGATTTTTACATGAGAATTTCTCGACAATAAATTGATA
CATGAAAGATTGAAGTGATTGAAAGATTAAAATGTATCacattatttcat
tatttttacgAATAATCTTTATTTCCTTCTTCTTAATGTTAATTAAATTC
TCTCAAAAAACCAGCGGTCTTTCTGGTATAGTTTTTGTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056872-exon-scaffold_284-1491911889:746769..746924 | TCONS_00056872-exon-scaffold_284-1491911889:746769..746924 | Clytia hemisphaerica | exon |
| TCONS_00056872-exon-scaffold_284-1510915933:746769..746924 | TCONS_00056872-exon-scaffold_284-1510915933:746769..746924 | Clytia hemisphaerica | exon |
| TCONS_00056872-exon-scaffold_284-1575043694:746769..746924 | TCONS_00056872-exon-scaffold_284-1575043694:746769..746924 | Clytia hemisphaerica | exon |
| TCONS_00056872-exon-scaffold_284-1491911889:747171..747709 | TCONS_00056872-exon-scaffold_284-1491911889:747171..747709 | Clytia hemisphaerica | exon |
| TCONS_00056872-exon-scaffold_284-1510915933:747171..747709 | TCONS_00056872-exon-scaffold_284-1510915933:747171..747709 | Clytia hemisphaerica | exon |
| TCONS_00056872-exon-scaffold_284-1575043694:747171..747709 | TCONS_00056872-exon-scaffold_284-1575043694:747171..747709 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:746769..747709 + |
Blast
The following BLAST results are available for this feature:
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