TCONS_00056948 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056948
Unique NameTCONS_00056948
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2022

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056948 ID=TCONS_00056948|Name=TCONS_00056948|organism=Clytia hemisphaerica|type=transcript|length=2022bp
TACACGTCCATTCTTGTTATATATTCGAAGGATTTTGTTTTAGGAGATTT
CATTTTTAGTGGGATTCATATATACAATACTTGGAGGCCACGGTATCATT
TTCTTATTGTTTTAGTGGGTAAAAGACGATAAATATTCTCATAAACTAAA
AAACCATGGCTGCTCCTATACAACAAATTTCAAATGGCGCTATACCAATT
ATGTCTGGTGTTGCAGGAACTCCAGTTCAACAGCCAGCTGTTGTttacca
acaacaacaaccaatgATTGTCGCAGGTGCTGCTCCGATGGGTTACGCAC
CACGAAAGCCCTACATCAGGAATCCGAATGAGGAGCATTGCAAAATCTTT
GTCGGAGGTGTTGGTAAATTGACAAATGATGAATCTCTTAGAGCCTACTT
TGGAAAATTCGGAGAAATTGCAGATAGTGTTATAATGAAAGATAAACATA
CAAATGAGCCAAGAGGGTTTGCATTCGTCACATTCAAAACACCAGAAGCT
GTTTCAGCTGTCATTGAACAAAATAATAAAGGTGGACATACTCTTGATGG
AAAAATGTTTATTGAAGTACGAAAGTTCCAGAGAAAATCTGAGtatgACC
CAGATAAGGCCAACACAACTCTTACTACTGCCAATGGTGCTGCACAACTT
AACTTTCAATACAAAGGTCCAATGAAGTGCTCACCAGAAATGAAAGTTTT
TGTTGGTGGAATTGGTATTGGTACAACAGAGGATGatgtaaagaaatatt
ttgaacaatttgGAAAGGTCCTTGCTGTCGATATGCCTGTTCATCATGTG
TATAAATGTCCCAAAGGCTTTGCATTTGTTGGATTTGAGACATTTGATGT
AGTTGCAGCTGTAACAAAAGATCGATATCATCAGATAAATGGAAAAACGG
TCGAAGTAAAAGGCTCAGATGAGCAGCAAGCACATTTGAACAAAAAGAAG
GCTGAAGCTATCCGGTATGCTTCTGCTGGAAGAGGTAGAGGAATTGGATC
AGGAAATATTGGAACAGTGACAGGATACGGTGCATATGCAAACCTTGGTC
AACCATTAATCGTAAACCCTGCTCAACATAGTGTACAATATACAGtTCCT
GCTGCAGCAACTGGTGGATATGTGTATGATCCCGCATCTAATACGTATTA
TCAACTCCCTGGAACTGTCGTCGCTGGTGGTGCAGTTGCAGGTGCAGTGC
AAACGGTAGGAACCTCAGTCGCAGCTGCCTCCCCATACGCTGGTGCAACC
ATCGCAGCAGGTCAACAAGTCTTAACTTCTCCACAAGTTGGTCAGCGAAC
GTTACAAGCAACTGATATGATCCAAGGACTAGCAGCAGGCTCAACAGTTG
CCTTGGGCGCAGCGTATCCAAGCGAAACATCAACCTTTGGGCCAACTCGA
CATAACGTGATCGGAGCCAGTGCGCAACAACCGATGGCAGGAAACACAGT
CGCCGATCCTCACGTCGTCTATTCTACAGCAACATCTATTTCTGCTGGCG
ATGCTGCTTTGTCAGCGGCTCGTGGTTACCACCCTTATGGAAGATAAGAT
ATTGAacttcaaaactgaaaaaagagaCTTCAATCGTACTTTGATCTGTA
CGTAAAGAAGAAAGCTTTGAAAGACTCGATCTTCACTCATGGACAGcgat
tttgtaaataaaaacttttttaatctattgattgattgatgctTTGTCAG
TTGGTTCTTCGATACGTGATAATCATATTGCTCTTTGGTGACAATTCGGT
TTTataaatgaaaagacattttattGGATTTGTCTACGCCATGCACAATG
GATGTAGATATTTTACGCGATAATTTCATTTGAATGAACAATTTTTAACG
TGAGAACTTTATGGACATGCGCGatatttctctctttttatttgaaagaa
aatttattcaatggaattacaaaatattttgattgtttatccatttctta
tttttttatcgGAATTTTCTTTACTTACTATTGAGTCCACTTCCACATCA
GCTTAGTTTGAGATGTGTAGGG
Run BLAST on NCBI

transcript from alignment at scaffold_284:879845..888775-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056948 ID=TCONS_00056948|Name=TCONS_00056948|organism=Clytia hemisphaerica|type=transcript|length=8931bp|location=Sequence derived from alignment at scaffold_284:879845..888775- (Clytia hemisphaerica)
TACACGTCCATTCTTGTTATATATTCGAAGGATTTTGTTTTAGGAGATTT CATTTTTAGTGGGATTCATATATACAATACTTGGAGGCCACGGTATCATT TTCTTATTGTTTTAGTGGGTAAAAGACGATAAATATTCTCATAAACTAAA AAACCATGGCTGCTCCTATACAACAAATTTCAAATGGCGCTATACCAATT ATGTCTGGTGTTGCAGGAACTCCAGTTCAACAGCCAGCTGTTGTTTACCA ACAACAACAACCAATGATTGTCGCAGGTGCTGCTCCGATGGGTTACGCAC CACGAAAGCCCTACATCAGGAATCCGAATGAGGAGCATTGGTAANTTACG CACCACGAAAGCCCTACATCAGGAATCCGAATGAGGAACATTGGTAAGGG AGCTTTTGAAAAATTGACTTTTTAATTTATCCATTATACAGTTATACTTG AAAAAAAGAGCTCTGGGAAAATAACCATTGTGTCTTCAAAAGACCAACTG TATTAGTTCCATAGGGAAAAATTCATGGTTGTTGGACTTGCAAATACGTG TGTCAGTGTACCAATCAAAGGAAATTCGTTTTTACCAATGTTACTTTTTT CTATATCTAAAGAATTAGTAAACGTTTTAAAATCTGTAAAAAGCTCTCTA CTCCCAAATAGTTCTAGATTACCAGACAATCTCAATCAAACAGAATCGAC GATCGAACCAGTCGAATGCAATCGAATCTCAATCGAGCGTCAAAATTCTG GGTAATATTCGATAGGTTCGATTGTTGTTCAACTGGTTCGATTGTCGTTC AACTACATTCGATTGTTTGAGTGAAACAAGGCATGTCCTAAATATATTTT GCGTGATGCGCACCGCTTCCCGTTATTCCTCCTTAACTCTCATATATAGC TCAAAAGAATCGAATCAACAAGAGGATTTCGAAAAGGGTCAGCTTTTTAA CAAAGATTAGTCTCTCTAAGGGTCAGGTCCTAATCAAACGCAATCGAACA TCAATCGAACGCAATCGAATATCAATTGAATCTGAAAATTGTGAGATTCA ATCGCGTTCGACAATCGAATTTCAATCGGTCGATTGCGTTCGATTTGGTT CGACTGGTTCGATCGTCGATTCCATTTGATTGAGATCGTCTGGAGATGAA ACCCTGCAAAAACCATGTTCAATCTTATCGTTTCGTTGGTATTGGAAACC AAGGAAATTCGCAAAAAATTTATTTCTCCCTTTTTTAGCAAAATCTTTGT CGGAGGTGTTGGTAAATTGACAAATGATGAATCTCTTAGAGCCTACTTTG GAAAATTCGGAGAAATTGCAGATAGTGTTATAATGAAAGATAAACATACA AATGAGCCAAGGTAAGTGTCAGCATAAACATATAAACAACTGGACATCCA TCTCCTTTCTTGTATTTTTGAAGATAACACTGCTAGCTTCGTTGCCGCCT CATTAAAATCATAAAACCTAACAATAAATTTTGGTATACCTCTTGGGAAT ACCTTGGTAAAACCTCAAAACTTCAACAAAAGTCTCTGTTGTTCTACTCT TCTCAAGTCTTATCTATATCATAACCAAGATAACTGAGGCAAAATCATTG TCAGCTTGTCAAAATTCTGACTAATATTTTTAAATTTAGACTCAAAAGTA TGGAATAATTTTAGAGAGTATGGGATTCAAATTATGATAATCTCATGGTA CAGGCTCTCAACTTTGGCGTACTATTTTTTTCATGTCATAAAAAAATTAT TAGAGTGACAAAAGGGATGCAAAAGTATACACGCAGTTGATAAAATACTT ATGCAATGTCAAGCTCTATCAATCCTTTTACCTTAGTAATTCCAATAAAA TGAAATTGTGACGGAATATTGTAGAATTTTATATATCAATCAGGGCTGCA AATAAGCATCGGTCATCGGTCAATGTCCGACTGAAAAAGCCATTTGACCG ACTGAAAATCATTTGTGTCGGTCATGATGTCCGAATGAAAAAAAAACATT AATTTGAGTTGAAAACAAATCTTTCACACCCCTGTCTCTTTGTCTATTAT TACTACTCTTTTACTTTCTTTTAGCTTTCAAGAGTGTTTCTAAAGTTTAC TTTGATTTCATGCGTTTTTATTTTTATCGACTTGCTTTCTTTGTAACTTT CATCAGTGTTTCTAAGTTCACTTTTTATTGACTTGCTATCTTTGTAAACT TTCAAGAGTGTTTATAAGTTCACTTTTTATCAACTTGCTTTCTTCGTAAC TTTCAAGAGTGTCTCTAAGCTCACTTTTATCAACTCGTTATCGTTGTAAC TTTCAAGGGTCTTTCTAAGTTCACTTATATCGCATTGCTTTCTTCGTAAC TTTAGAAGTTCCAAGGTCACTTTTACCTACTCTCTTTCTCCATAACTTTC AAGACTGTATGATTTCAGAAAACTTATAGACTGAATGACCGACAGGATTT AGAGCTTGACCGACAGAATTTCATCTCAGTCCCGACATGATGTCTGATTG ACTAGAAATATTTATTTGCAGCCCCGATCAATTTTTTAATACAGTGGGTA ACAAAGCTCGCTTCAAAGACACAATGGAAGATAGTCGTCCAGTCGTTTAT ATGTTCAGACAAAAAATTTGAGCCTTGCTAACAGTATCTTATGAAAAACT TTGTTTTAAAAAACGTTTTAAATTAAAAAAGCAATGGTGAAATGCTGAGT CAGCAGAAAAGTAAATTGCTGTTTTTGGAAGGAACTTATGCATTGAGCAA TGATCATCTAAAAAAATTACTTTCCAAAACTCCAAAAAAGAGCAATAATT GCTGTTTTTATCTCATATACCCCACTGTATATTTTCAGACTGAAGAGAAA AACCCTTTTCTTTTGTTATTTCATGATATCTTTTACCTGTTCATTAATTT CACAGAGGGTTTGCATTCGTCACATTCAAAACACCAGAAGCTGTTTCAGC TGTCATTGAACAAAATAATAAAGGTGGACATACTCTTGATGGAAAAATGG TAGGTTGTAATGTCTGAAAGAAACTCTACATTATATAATGACAAGAAAAA AATGACGTTTCTATAAGAGAATCATTCTGTGTTTTTTATACATTTTGGCA CACCTGCAATATTGCCAATATATTGAAGTAGTTTTGGTTTCATTTTTAAA ACTTAATTTGGTTGCTTCATACAGAGAAGTAGGATGAAATAGAAAACCAG CTTCCTTGACTACCCCATGCCTTTGTTTTAGCTTTATTAATAAGGTTAGT TTGATTAGGAAAAGTTGAAGAAAAGATGGCTTGTCCTAAAAATGGCTGGC CATAAAAGTGGATTTGCGTTTTACATTTGTGCACCTACCTGCTTTTCAAT AAGATGTGCGCAATCCCGTGTGAAGTAGCAAATTTTACACCATTTTATTG CCTAAAAATTCTCGTTGTAATGATATTGATTTGTTTCAATAATATTTGGT CCAGTTTCGGGGAAAGCAATCATTAGAATTGTTAATGTTAGGATATTGTG AGCAAGAAAATAGGTATCTTGTGGTCTGAGTGAGGTGTTCCCAAAATATA AGCCCCTAAAGTTTAAGCCTAATTAGACTCAAACAAAAGACTTCCACCAC ATCACCTCCCTTAAGGGCAAAGGACCTGGTACATGACGAGCCGTGTCTTC AAGAAGCTGTTTTTCTATCTCATTGCACTTCTCTGCTTCATATCTTTGAT ATCTGGGTTGAAAGAAAAATTATAAAAAATTATATTTTGTTTGTATTGAG CCTTTCACTGACACTGCTGAGATGGATTGAAAATATGTTATTTTGAGTTT GGAACAGGTTGGAAACATTTGTTTGAGGCTAGGAAGGTCTGGAAGATAAA AGAGTTCTTTTTTCTTTCCTTTACATAGTTTATTGAAGTACGAAAGTTCC AGAGAAAATCTGAGGTGAGATCAAGTTTCTGACTTCATTATTGTTGTTAT TCTTTGAAGGTTGATCCTAAGCCAGCTGTCCCTCAAGGTCCTGGAGTTCA AAATAAACCCTTGGTAAGTTTTTTAAGTCAGTCGATCTCTGGATCTTTGA TATTAATGCCCTATCTACTTGATTTTTACTGAATGACACAAGATGAGTCT TAGACTTTTGTTTATTTATTTTTTGTCTCATTACAGTTTTTGAATATTTT TCATTTTCAGTATGACCCAGATAAGGCCAACACAACTCTTACTACTGCCA ATGGTGCTGCACAACTTAACGTAAGAATTAAAAATCTTGGTATCAATATT GTTACATTTTGCATGCAAGTCAGTTTCAAATTATGTCTAAATCAGCAATG CCCTCAATTGAAGTTGATAAATGCTTTGCTATGACCACTGGTGTTTGATC AATAATTTAAATCAAAACTTTTCTTTCTTGAACAGTTTCAATACAAAGGT CCAATGAAGTGCTCACCAGAAATGAAAGTTTTTGTTGGTGGAATTGGTAT TGGTACAACAGAGGATGATGTAAAGAAATATTTTGAACAATTTGGAAAGG TAATTTGAACTTTTTTCTCTTCAAATACTCCTTCAAAATTAAAAAAACAA GGAATGTTTTGAAAATAAGACATTTAAAAATCTTAATTTCTTATCCTTCA GGTCCTTGCTGTCGATATGCCTGTTCATCATGTGTATAAATGTCCCAAAG GTATGTTTATTATTCAGAATTTCGGACTTTATGCCCCTCAAATATCCAAG TTTACGAAAATCACCATATTTTTTGATCCACACAAAAACAATTAACAATG CAAAAAAGTTTAACCCACGCAAATAAATTTTTGAACTTCGCAAAAAAAAA TTTGACCGTCCATAAAAAAATTCTACCCACATGTCCATTCAACCCAAGCA CCCACTCAACCCACACCCGTCAAATCCATACCAGGGTAGAATAACTGATT TTAGAGAGGGCTAACTAACTGTGATTTAAAACTTAATCATTTTCCTTTCC AACAATTTGTTGACTAGGCTATAAAAAAAAAAAAATTCTATCAATTCATT TTCTGCTACATCTGGTTGTAATCATACTTACAAATTCCTTAAAATTTTGT TTTGGTATATATGTTTTTGATAAGGGATATGGTTATGAAGTATAAGCTTT TCTTGGACGGGTAACTGACCTCAACTTGTCCGTGCACAAGATTACTATCA TCCCTATTACTATTTTCAGCTTTCTATCTGCTTGAGCCAATTTTATTTTA TATTGATTTATAATTAGTAGAAACCTAGTTGCACACCTTTGCATTTAACT CTAGACAAAATATATTGACAGAACTCATATATTTTAGATGTTTAAATATT TACAATTAATGAAAAATAGCCACAGCACAACTTAGCCTGTTTTTTAAGTA ACCAAAATATTATATTTGAGATCAGAATATTAACATTTTGAATAACATTT GACATTACTAGAATTTTTGACCTTCAAAATCTAAAAATATATACATCATT TTATGATTTTATACTTAAAAGTATTTTAACTAAGAACTTAATAGTCCCAT ATGCCATTAATCAATGTTTTTGAATGTATGAATTTACTATGTCTTCTTTT TAGCAAAATATTTCTAATTTATGATTACCTAATTAGGCTTTGCATTTGTT GGATTTGAGACATTTGATGTAGTTGCAGCTGTAACAAAAGATCGATATCA TCAGATAAATGGAAAAACGGTGTGATATAAAATATTTTAATGTTGTTTTA CCAATTATTTTTTCAATTCTTCGTAATTTATAATCAATATTTTTAAAAAG TTTCAGGTATTTTCACTATTTTGACTGACACTGTAACTAATTTTAGTTCA GCTCTTTTCAGAAATTTTACCACTATTTTTCTGTTTGTTTCTAGCCTTAG ACTTTAATATTGTTTGAATGTTATTTTGCAATCATTTGTTCAGTATTTTT GTTTTTCTGAAAAGCTAATTTTTGCTTATTTTTTAGATTTTAAAATTTGC CTTTTTTCAGTCAGTNTTATATTGATTTATAATTAGTAGAAACCTAGTTG CACACCTTTGCATTTAACTCTAGACAAAATATATTGACAGAACTCATATA TTTTAGATGTTTAAATATTTACAATTAATGAAAAATAGCCACAGCACAAC TTAGCCTGTTTTTTAAGTAACCAAAATATTATATTTGAGATCAGAATATT AACATTTTGAATAACATTTGACATTACTAGAATTTTTGACCTTCAAAATC TAAAAATATATACATCATTTTATGATTTTATACTTAAAAGTATTTTAACT AAGAACTTAATAGTCCCATATGCCATTAATCAATGTTTTTGAATGTATGA ATTTACTATGTCTTCTTTTTAGCAAAATATTTCTAATTTATGATTACCTA ATTAGGCTTTGCATTTGTTGGATTTGAGACATTTGATGTAGTTGCAGCTG TAACAAAAGATCGATATCATCAGATAAATGGAAAAACGGTGTGATATAAA ATATTTTAATGTTGTTTTACCAATTATTTTTTCAATTCTTCGTAATTTAT AATCAATATTTTTAAAAAGTTTCAGGTATTTTCACTATTTTGACTGACAC TGTAACTAATTTTAGTTCAGCTCTTTTCAGAAATTTTACCACTATTTTTC TGTTTGTTTCTAGCCTTAGACTTTAATATTGTTTGAATGTTATTTTGCAA TCATTTGTTCAGTATTTTTGTTTTTCTGAAAAGCTAATTTTTGCTTATTT TCTAGATTTTAAAATTTGCCTTTTTTCAGTCAGTCATTATTCAGTATTAC TGTTCTAAACTGAATTTTGAGATTGGTTTATTTTGTTGTAGGTCGAAGTA AAAGGCTCAGATGAGCAGCAAGCACATTTGAACAAAAAGAAGGCTGAAGG TATGAGTGAGTACCAGAACTTTCTTATTATTTTAATGATTACCTTTCGAA TGCTCAAATACTGATTCTCGTCTACGGGAAGGGTTTTTTTCAAATGACCT TCTTGATTTATTTGCGAATTAAATACCTTAAGGAAAGAAATTTTTGTGGA ACAAGTTTTTGACAAATCCGCGAAATAAGAATATTATCATGATTTAGACA GGTTTAGAAAATAACCTATAGTATTAGTGTTTTTGGGGCAGAATAAGCCA TATTTAAACAAAAATTTGTCTCAACCGCAAAATTAAATTCTGTGAAACTT CTGAATTTTGAGCTGTGAACTGCGAAATTAAATTCCACAAAAATTTTTTT CCGCAGAGATTTCTTCCCTTAAGGTAACAACAAACAAGGAATTGAAATGA ATTTATCTTAAATATTTTGCTTTTTTTTCAGCTATCCGGTATGCTTCTGC TGGAAGAGGTAGAGGAATTGGATCAGGAAATATTGGAACAGTGACAGGAT ACGGTGCATATGCAAACCTTGGTCAACCATTAATCGTAAACCCTGCTCAA CATAGTGTACAATATACAGGTAAGAAGTTAGTTAGCAAAACATATTTGCT ATAAGCCTTAAATATCAACACTGATCACACCTTGGTAAAAGGATTAATGA ATTATAGACAAAAGTATGTTAATTAGGGTTTAAACTGGTGTAAATAATGT TTTTTTTTTTTTTCAACCTGATAAAAAAAGAAATAAAATAATTGATTCGA CAAATCCTTTTGAACCTTCAGTTGCTTTTTCATTACTATTTTGTTTTTTT CTCAGTTCCTGCTGCAGCAACTGGTGGATATGTGTATGATCCCGCATCTA ATACGTATTATCAACTCCCTGGAACTGTCGTCGCTGGTAAGACTATCACT CAAATTTACCAGATGAATGCACGTCAAAATATTTCAAAACCTTATTTTAT AAAAAATTACTCAATAGTAGGTTTTAAAATAGATCACTCTTTGGTATCTG GTCAAAAATATAAGCTCGATAAAATCGCGAAATTTAATCCCCGTTAAAGT TTATCCCATTAAAGTAGTAACAAAATATTTCTGTAATTAACAGGTGGTGC AGTTGCAGGTGCAGTGCAAACGGTAGGAACCTCAGTCGCAGCTGCCTCCC CATACGCTGGTGCAACCATCGCAGCAGGTCAACAAGTCTTAACTTCTCCA CAAGTTGGTCAGCGAACGTTACAAGCAACTGATATGATCCAAGGACTAGC AGCAGGCTCAACAGTTGGTAAGTGAGTAATCTACGTAAGTCATCTCTTGA GAATAACTTTTAAAAGTTTGAGTGTCCAAAAGTTCTAAGTAAACATCATA GATCAATAACAGTACTTTGTATGTATATGATATTATCAATCATATTATCA TATTTTTAGCCTTGGGCGCAGCGTATCCAAGCGAAACATCAACCTTTGGG CCAACTCGACATAACGTGATCGGAGCCAGTGCGCAACAACCGATGGCAGG AAACACAGTCGCCGATCCTCACGTCGTCTATTCTACAGCAACATCTATTT CTGCTGGCGATGCTGCTTTGTCAGCGGCTCGTGGTTACCACCCTTATGGA AGATAAGATATTGAACTTCAAAACTGAAAAAAGAGACTTCAATCGTACTT TGATCTGTACGTAAAGAAGAAAGCTTTGAAAGACTCGATCTTCACTCATG GACAGCGATTTTGTAAATAAAAACTTTTTTAATCTATTGATTGATTGATG CTTTGTCAGTTGGTTCTTCGATACGTGATAATCATATTGCTCTTTGGTGA CAATTCGGTTTTATAAATGAAAAGACATTTTATTGGATTTGTCTACGCCA TGCACAATGGATGTAGATATTTTACGCGATAATTTCATTTGAATGAACAA TTTTTAACGTGAGAACTTTATGGACATGCGCGATATTTCTCTCTTTTTAT TTGAAAGAAAATTTATTCAATGGAATTACAAAATATTTTGATTGTTTATC CATTTCTTATTTTTTTATCGGAATTTTCTTTACTTACTATTGAGTCCACT TCCACATCAGCTTAGTTTGAGATGTGTAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035868XLOC_035868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056948-exon-scaffold_284-1575043694:888436..888775TCONS_00056948-exon-scaffold_284-1575043694:888436..888775Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:887415..887537TCONS_00056948-exon-scaffold_284-1575043694:887415..887537Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:885777..885870TCONS_00056948-exon-scaffold_284-1575043694:885777..885870Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:884862..884897TCONS_00056948-exon-scaffold_284-1575043694:884862..884897Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:884556..884615TCONS_00056948-exon-scaffold_284-1575043694:884556..884615Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:884277..884390TCONS_00056948-exon-scaffold_284-1575043694:884277..884390Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:884126..884174TCONS_00056948-exon-scaffold_284-1575043694:884126..884174Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:883107..883189TCONS_00056948-exon-scaffold_284-1575043694:883107..883189Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:881927..881984TCONS_00056948-exon-scaffold_284-1575043694:881927..881984Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:881357..881494TCONS_00056948-exon-scaffold_284-1575043694:881357..881494Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:881040..881120TCONS_00056948-exon-scaffold_284-1575043694:881040..881120Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:880659..880832TCONS_00056948-exon-scaffold_284-1575043694:880659..880832Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1575043694:879845..880516TCONS_00056948-exon-scaffold_284-1575043694:879845..880516Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:888436..888775TCONS_00056948-exon-scaffold_284-1510915933:888436..888775Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:887415..887537TCONS_00056948-exon-scaffold_284-1510915933:887415..887537Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:885777..885870TCONS_00056948-exon-scaffold_284-1510915933:885777..885870Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:884862..884897TCONS_00056948-exon-scaffold_284-1510915933:884862..884897Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:884556..884615TCONS_00056948-exon-scaffold_284-1510915933:884556..884615Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:884277..884390TCONS_00056948-exon-scaffold_284-1510915933:884277..884390Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:884126..884174TCONS_00056948-exon-scaffold_284-1510915933:884126..884174Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:883107..883189TCONS_00056948-exon-scaffold_284-1510915933:883107..883189Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:881927..881984TCONS_00056948-exon-scaffold_284-1510915933:881927..881984Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:881357..881494TCONS_00056948-exon-scaffold_284-1510915933:881357..881494Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:881040..881120TCONS_00056948-exon-scaffold_284-1510915933:881040..881120Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:880659..880832TCONS_00056948-exon-scaffold_284-1510915933:880659..880832Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1510915933:879845..880516TCONS_00056948-exon-scaffold_284-1510915933:879845..880516Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:888436..888775TCONS_00056948-exon-scaffold_284-1491911889:888436..888775Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:887415..887537TCONS_00056948-exon-scaffold_284-1491911889:887415..887537Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:885777..885870TCONS_00056948-exon-scaffold_284-1491911889:885777..885870Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:884862..884897TCONS_00056948-exon-scaffold_284-1491911889:884862..884897Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:884556..884615TCONS_00056948-exon-scaffold_284-1491911889:884556..884615Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:884277..884390TCONS_00056948-exon-scaffold_284-1491911889:884277..884390Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:884126..884174TCONS_00056948-exon-scaffold_284-1491911889:884126..884174Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:883107..883189TCONS_00056948-exon-scaffold_284-1491911889:883107..883189Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:881927..881984TCONS_00056948-exon-scaffold_284-1491911889:881927..881984Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:881357..881494TCONS_00056948-exon-scaffold_284-1491911889:881357..881494Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:881040..881120TCONS_00056948-exon-scaffold_284-1491911889:881040..881120Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:880659..880832TCONS_00056948-exon-scaffold_284-1491911889:880659..880832Clytia hemisphaericaexon
TCONS_00056948-exon-scaffold_284-1491911889:879845..880516TCONS_00056948-exon-scaffold_284-1491911889:879845..880516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:879845..888775 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (1.0256 tpm) - - (280.548 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.4144 11.1159 15.3471 14.0079 280.548 227.032 87.5166 103.509 5.95982 1.0256 13.8443 8.13752 4.52834 12.6887 7.18404 7.23306 16.2229 13.5975 1.56227 3.71647 27.6007 29.8024 32.6279 42.1442 51.9399 53.0067 6.92924 21.4777 25.8077 25.3062
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056948 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
200400600800100012001400160018002000Expect = 7.29e-32 / Id = 34.29SequenceMSI1H
Match NameE-valueIdentityDescription
MSI1H7.293e-3234.29RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
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