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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057029 ID=TCONS_00057029|Name=TCONS_00057029|organism=Clytia hemisphaerica|type=transcript|length=1019bp
aaaatattttcccaaataTTAATAAGCGCTAGTTTGGAACAAAAATGTCC
TGCAGCTTGGTAAATACCGTGTCTTTCCATTTCAAGAAATGACTAGCAAG
TCAATGATGATGcaagaaatcaacaaaagaaaccaataaaagaCCAATGA
GAAAAACCATAAGTGGGAAAAAATGATTGTTTGCCAATCTTGGGGATTTG
CCAAACCCAAAATTAGATTGGCGGGTTTCATGAGTTTTCCTGTGGTATAT
ACATGAAGACTCCCGGGATTGGCAAACatgaagaaataaaataaaaactc
aaaattcacccctggaaaagaaatatttagattgttttattttgttcaat
cgCAAACGCTTGTGAAAGCGCCAAAATGTTTTACTATCCAATCACAGCGA
AATCGATTGCTTTAATTTTTCCAATCAAAAAATTGCTATACCATTGTTTA
AAAAGAAGCATCCAATCAAATGAAGGTAAAGtgctttcatccaatcagaa
aggATTCTTTGAAATAGTGCGTTACTATTTCAAAgaatcaaattcccgct
ttcgtTTGAGAACTcaagataagaaaaaattcaaccCTTAGAATCAACGA
TTGAACCAAATAAAGTTATATGACTACTCATTTTCCAAGATGCCGAAAAG
CCATTAGCGCCAAAAATTAGAACTAGTGGTTAACCCTCATCATACACAgc
aatcttattggttgaaatttaaaaaagactttccaAAGGAGCAAATTACG
CATAGGGTCCACCTGGGTCCACCCCCCAGAAATTAGGGGGTACCTCAAAA
AAAAAGTGCTAAAAAAGCCAGGTACCTGGAAGATTTCTTAAATTTAGGGG
GTACCTGAAATGTTTGGGGGTATTTGCATTTTCACAAGTGGGGGTGGGGG
TGGGGGCTGTTGTTTTGTATGAACATGGTGGCCAGCCATGGGATCatccc
cccaggaagatgggggggaatcagattttggtgccaggggggaagtgaaa
atttcaagcttgatggggg Run BLAST on NCBI transcript from alignment at scaffold_284:959939..960957 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057029 ID=TCONS_00057029|Name=TCONS_00057029|organism=Clytia hemisphaerica|type=transcript|length=1019bp|location=Sequence derived from alignment at scaffold_284:959939..960957 (Clytia hemisphaerica)
cccccatcaagcttgaaattttcacttcccccctggcaccaaaatctgat
tcccccccatcttcctggggggatGATCCCATGGCTGGCCACCATGTTCA
TACAAAACAACAGCCCCCACCCCCACCCCCACTTGTGAAAATGCAAATAC
CCCCAAACATTTCAGGTACCCCCTAAATTTAAGAAATCTTCCAGGTACCT
GGCTTTTTTAGCACTTTTTTTTTGAGGTACCCCCTAATTTCTGGGGGGTG
GACCCAGGTGGACCCTATGCGTAATTTGCTCCTTtggaaagtctttttta
aatttcaaccaataagattgcTGTGTATGATGAGGGTTAACCACTAGTTC
TAATTTTTGGCGCTAATGGCTTTTCGGCATCTTGGAAAATGAGTAGTCAT
ATAACTTTATTTGGTTCAATCGTTGATTCTAAGggttgaattttttctta
tcttgAGTTCTCAAacgaaagcgggaatttgattcTTTGAAATAGTAACG
CACTATTTCAAAGAATcctttctgattggatgaaagcaCTTTACCTTCAT
TTGATTGGATGCTTCTTTTTAAACAATGGTATAGCAATTTTTTGATTGGA
AAAATTAAAGCAATCGATTTCGCTGTGATTGGATAGTAAAACATTTTGGC
GCTTTCACAAGCGTTTGcgattgaacaaaataaaacaatctaaatatttc
ttttccaggggtgaattttgagtttttattttatttcttcatGTTTGCCA
ATCCCGGGAGTCTTCATGTATATACCACAGGAAAACTCATGAAACCCGCC
AATCTAATTTTGGGTTTGGCAAATCCCCAAGATTGGCAAACAATCATTTT
TTCCCACTTATGGTTTTTCTCATTGGtcttttattggtttcttttgttga
tttcttgCATCATCATTGACTTGCTAGTCATTTCTTGAAATGGAAAGACA
CGGTATTTACCAAGCTGCAGGACATTTTTGTTCCAAACTAGCGCTTATTA
Atatttgggaaaatatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057029-exon-scaffold_284-1491911889:959939..960957 | TCONS_00057029-exon-scaffold_284-1491911889:959939..960957 | Clytia hemisphaerica | exon |
| TCONS_00057029-exon-scaffold_284-1510915933:959939..960957 | TCONS_00057029-exon-scaffold_284-1510915933:959939..960957 | Clytia hemisphaerica | exon |
| TCONS_00057029-exon-scaffold_284-1575043694:959939..960957 | TCONS_00057029-exon-scaffold_284-1575043694:959939..960957 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:959939..960957 . |
Blast
The following BLAST results are available for this feature:
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