TCONS_00057055 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00057055
Unique Name	TCONS_00057055
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2466

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_285:167196..180235+
coding sequence from alignment at scaffold_285:167196..180235+

transcript sequence

>TCONS_00057055 ID=TCONS_00057055|Name=TCONS_00057055|organism=Clytia hemisphaerica|type=transcript|length=2466bp
aaatttcaaaaaactgcaATTTTTCCAAAGACAATAATCTTGCAACCAGA
CGAGACCAGACAAAAAAGCAGCTGCAACTGAAAACCTACTGTATTGGCCC
TGACATTCTTTAATTTGAAAACACTACTAAGTACCTATTTTACTGAAGGA
TAATTTTCAGCTTCTTGTGATGCAACCAAAATGACACGAGCATATTTGGT
AATTTTGTTGGAAGGATCTCTTAACTTCAGCAATCGCTGTTCAAGGAATT
GTGACAAACCAAATAGACATTAAATTCAACATTCTTTATTTTATCCtcaa
caatttttatttatttttcaacgtAAATAATTTTAAACATTGGTTTGACC
AATAttgtatatttatttcaatcctGCATTTTGGATTTATTGCTGCAcag
tattttgaattttttattttcaaattttggattATTTTGCTCATCATTTT
ACATTTGGTAAAAACCGTATATCAAGATTGATCAACTCTTgacttgtata
ttttttacattgGATCGTATTTATTTACCGACTTAGTTATTTGTGATTTA
AACCGCATAACATCATTCGAGTGTACAAAAAGTTTGTACAACTAGGAAAA
TTCATTAACCAAAGAAGAGCTCTTCCATATGACCAAACAATACTATTGGA
GTCTACAAAGAGCTTCTAGCACAAGGAAAGTTAATCGACTCTCAAGAGAA
AACCAAGAGATCCTTCCACATAACCAGTCAAACTCAGATAGGAAGAAAAA
GAGAGTGTTTCAAATAAAAGCACAGAACAAAAGAAGGTTTCAATCAAATC
CACAAACTCATACCAAAACACTTTGTAAAACAACAATGGCTCCATGCTCA
AATACAAAATGTCAACAACAACCAGAGCCTCCATTCATTTACCAAAAACC
ACCATCATCAAGCAACACTAAAGAATCCTTCGACAATCTCAACGATATTC
ATCAATCATCGCCAATCATCACCGAAGATGATACAgaatcaccagaacca
ccaTTACAACCAGTATCTCCAGAAGAGGATATCATATTCCAGCTTCACCC
TCAACGTTGGTTCGTCCTGGCATCATATTGCCTCCTATCCTTGGTCTGTG
GCTCAAATTGGCTTTGCTTTCCAGCAGTATCCAACATCTTAAGAGAATAT
TACCAAATCAGCATCTTGTCGATCAATATGCTTTCAATTGTATTTGGAAT
CTGTTTAGTTCTTTTCTCCATACCATTTGCACTGTTGTTGAACAAATACG
GTCTTGCAGTGGTAATGCAGACGTCAGCATTTCTCAATTTAACAGGAGCC
CTTATCAAATATTTTGGAGATGATGCAGATCATGGCTACTGGTTCCTGCT
CTGTGGTAACACATTTCACGCCTTGTCTGTAGCAGGCTTCCTCTTCCTGC
CAGGAGACATCGCATCCACTTGGTTCGGGGAACACGAAGCAGGGAAGGCT
ACATCCCTATGTGTAGCATTCGACGCTTTAGGGACCGGGGTAGGCTTCTT
ACTAGCTACCACTATCGTTCAAGGAAATAAAGACCCCTACATTGTTCAAG
GTAGCATCAAGCAGTTCCTATTATCTCAGCTGATTCCATCGGTAGCTGTC
TTTCTATTTGTCTTGATGTTCGTGAGAAGAAGACCTCCCCATCCACCCAA
CTTCAAAGAACTTGCTATCAGACGTGATGAGATGTTTAGAAAACACGTGC
AACTACAATATTTGTTGGACATTGAACAGGTCTTGGATAGAAAGGGAAAC
GTGTCTGAACCAGTGCACGTGCGACGTCTTCCGTGTATCAAACAACACCG
TATTCTGATGTCATCTTTattcaaactgatcaaaaataCAGATTTCCAAC
TCATCTTTCACATGCAAGGAATCGTGGCGTCCATTGAAGGTTTATACGAG
ATCCTCTTAAACGAGATGCTTATTGACATTTTCCCCGGTAGCGAACGAGC
GATCGGGATTCTCggtttcgtttcagtcattctCGGTTTTACGACGAACA
TTCTCGTCGGAGCTTTAATCGATAAAACGGGACATTACCGACGAGTGTCA
TTTATCGTTTTCTTTTTAACGACAATTTTCGCCTCGTTATGGTATATAGC
GATCGAGTACATCCATAATTTCCTGGCAATCTCAATCATATTAAGTCTGT
TAATGTCCATCAGTACCTCATATTACACAATTGCTTTTGCGCACGGAGCA
CAAGTAGCCGACAATGTCTCCGCATCTGCAATTGGAGTCATGTTGGTGTT
AACATCACAGATTTACGATACTATGAGCTCATTTGTCGCAACTGAAATTT
TATCGAGTTTTGGATCATCCTATGTAAATGGTCTTGCTATAACTTTGTGT
GTTGTTGCAACGATGTTGTCATTTTTTGTAGGGAATGGTGATAATAAAAG
GACTGAGGTCGCAGCACCGGCCCATGTTTGATTATAATCGTTTATAGCTT
TACGTTTCTAATATAG

Run BLAST on NCBI

protein sequence of TCONS_00057055-protein

>TCONS_00057055-protein ID=TCONS_00057055-protein|Name=TCONS_00057055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=600bp
MTKQYYWSLQRASSTRKVNRLSRENQEILPHNQSNSDRKKKRVFQIKAQN
KRRFQSNPQTHTKTLCKTTMAPCSNTKCQQQPEPPFIYQKPPSSSNTKES
FDNLNDIHQSSPIITEDDTESPEPPLQPVSPEEDIIFQLHPQRWFVLASY
CLLSLVCGSNWLCFPAVSNILREYYQISILSINMLSIVFGICLVLFSIPF
ALLLNKYGLAVVMQTSAFLNLTGALIKYFGDDADHGYWFLLCGNTFHALS
VAGFLFLPGDIASTWFGEHEAGKATSLCVAFDALGTGVGFLLATTIVQGN
KDPYIVQGSIKQFLLSQLIPSVAVFLFVLMFVRRRPPHPPNFKELAIRRD
EMFRKHVQLQYLLDIEQVLDRKGNVSEPVHVRRLPCIKQHRILMSSLFKL
IKNTDFQLIFHMQGIVASIEGLYEILLNEMLIDIFPGSERAIGILGFVSV
ILGFTTNILVGALIDKTGHYRRVSFIVFFLTTIFASLWYIAIEYIHNFLA
ISIILSLLMSISTSYYTIAFAHGAQVADNVSASAIGVMLVLTSQIYDTMS
SFVATEILSSFGSSYVNGLAITLCVVATMLSFFVGNGDNKRTEVAAPAHV

Run BLAST on NCBI

transcript from alignment at scaffold_285:167196..180235+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00057055 ID=TCONS_00057055|Name=TCONS_00057055|organism=Clytia hemisphaerica|type=transcript|length=13040bp|location=Sequence derived from alignment at scaffold_285:167196..180235+ (Clytia hemisphaerica)
aaatttcaaaaaactgcaATTTTTCCAAAGACAATAATCTTGCAACCAGA
CGAGACCAGACAAAAAAGCAGCTGCAACTGAAAACCTACTGTATTGGCCC
TGACATTCTTTAATTTGAAAACACTACTAAGTACCTATTTTACTGAAGGA
TAATTTTCAGCTTCTTGTGATGCAACCAAGTAAGTTATTTGTTTCCCACT
TTTCGTCCTCTCCAGCTAGCCATAAAAAgcggttggcaaacgatatccta
ctccaggatgcatcgtctcttattttcctcctattttctactttcctatc
ttctatcctgattttctgtctttctcaagtgtttctaactgttttctaag
tatttttctgaaatttgccggtaccggtgaaacaggtctccgaccccggc
tcgaaccaccaaatgcaagcaaccttggttttaagaaagctcccaaccct
actggtgcccctacaaggatccctacgggatcctaagttaagtCACAGGG
TACGAATGCCCCTAAGAAGGCCTTCGGCCTTATATTGTGACTCTcaagct
ccaaccctaaccctaactgataataactgaacccccgtctaggtccgcag
attgaaaaatttcacttgcatcctggagtatgatatcgtctgccaaccat
AAAAAGCGTCCCTTCTGCAGCTTGTTGCCATAGACGTAAGCAAAAACATA
CATTCATTAGGCCTAATAGCATGATGGCATTTCCTACACTGTCAATCTTA
CAGTAAACCATATTTAAGTACTGAGTTTatcatcaactgctctaacttgg
gactatctgacaaaaccaTTGGACGGCATGCAatcagccaccatttcacc
gaacctccaaagtcatttgatttgagttaatgaacagcgtattaaaaaaa
tACACTATACTCTTTCGcgccgagtaggcttttaagtcgaaatatgaaaa
aaatccgtaggtATCTgatataccgtgagtggtcctaaatccgacagccc
tgcctaattatccgaccccccaaatgaCTGCTATGAacaaaattctatgt
ttacaaagattccctctccaagttgaacaataaaatattttgtaagaact
cttgaaacaaaacatgtAAGAAGATGACTAAAATGTAATAATGTCAATTT
AATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNACGGTATCCATTGAACTggatattttg
ttcaaaaattatatcaagaaaacaaatgataaaagaatagacttttttta
tttagctaggatataaaaacataaaacagcACAACCAGACCTTCTGTCTT
GAGTTACTCTTTTTTTCCCAGCAACTTTGTTTATGTATAGGTTTAAAGAT
TCAATACCCTCGTTTTGCATAGACCGATTCAACAAAATCCAGTCAGGGAC
TATCTTCGAGAGCAAACTCAACCAAGCTGCCTATTCCTGACATgaatttc
acccaaaaaaacaaaaaatatttgcaCGTCCGAATGGAAAATATTAAAAG
ACTTAAATTTATCAAGGTGCTACTAAATCACTTTGTTTATACATATTTGT
TCTaccatttcttagaaaaaatgacTGATCATAACTGACGTCACACGGAA
TTGGTCTCTAAGATTCCACTTTCTGTACTAAGATTCCACTGacttttttg
gaattttccCCCTTCTTTTTGCTGAGATAaccggcatgagattggaaagt
GTTTTTTCTAAACGTACataaaatcttgtgtttacttaTGAAACTGTCTA
CCGCACTTACCTATTAGAATCCAAACGCTCCCTTAACAGTTTAGACTCCT
ATCTTTGGGATTTGGAGTGTGGCCTAATTctacttttgttttcagtggtt
tcatttttgatttcaaccCAACATCTGCCcacatagttacaggggtttgc
gCAAGAAAAACAAACATGGACAATTTTCTATATGTTTTAGTGCATAAAAG
TGCactcacaaacatcaatttgtcagatctaacaaaattaataacagtat
tgtcatcatttgacaactaaacaaaggattttctgtcaagaacctTGTAA
ACAGTCtaacaacttccatcaaaatgatctacCACAGCTAAGTTCTTCAA
TTTTGCGCGGTTTGATGATTGAGCCAAGTTTTtccaaacttcaaaaaaat
gatttttgttcTGCTTTTGTGGAACTTTAGCTTAAAGACTTTGAATTACA
CGCTCATAATTTGTTCAGTATATTGCAGCGGTGAGATGTTTACCCGTGGG
CGATTTCTGATTCTACAATAGGTGTCAGCCATTTTAAGGaaagcaaaaaa
tttaaaaaggcaAGGCTAACAGTGAACTTTCATTTGTCATTCGGTCTCTG
TTGCAGAAATGTTGGCTCATTTGTGTTTCTAAATGCTGAATTTATGGAAA
CAAAAATGACGCTGTGTACCCAACTGCAATTGACTGGTCACTTGTAATAA
CTTTCCTCacttctcttttcaaaacatttttatatcattttatcaacatt
tgtGCCTGGCATGAGGACTGGTTatgattacgtaatgttttgaaaattac
ttTGCTCATTCTCAGCTTTCTTTTGCATTTTCACACGCGTGCAAATCTGA
TAAAGATATATTNTTTATGTATAGGTTTAAAGATTCAATACCCTCGTTTT
GCATAGACCGATTCAACAAAATCCAGTCAGGGACTATCTTCGAGAGCAAA
CTCAACCAAGCTGCCTATTCCTGACATgaatttcacccaaaaaaacaNAA
TAACTTTCCTCacttctcttttcaaaacatttttatatcattttatcaac
atttgtGCCTGGCATGAGGACTGGTTatgattacgtaatgttttgaaaat
tacttTGCTCATTCTCAGCTTTCTTTTGCATTTTCACACGCGTGCAAATC
TGATAAAGATATATTAAATGTTATGGTGCTGTGGATGTTGTCACACACTT
TTGCTACACATAGTAAGGAAACATTATTTTTGTACACAACTCAAAACAGT
TTGGTTGCCACAGACCTTTTAGGAAAAGGAGACTTTCTATTGAGTAATAA
ATTACTGCAGCATACATTACTTGCCCACAGCCAGAACAAAAACAGGATAA
GTTATCCTGTCTCTAGGTAACAGCTGTGTTGTTAGTAGACAAATATTgtc
atcaaaaagatttatGCTGTAGTAATTAGTCATTCAATAGACTATCGCGT
TTTTATGACACTCATAACGTTACGAGAAGGGGTGTGAAGGGTGTAATAAC
GCTCTCTTGCCAACAGTAATGTAGAAAAAAGGAGGGCAAGATTTTTTGGC
TACTTCCTTATTAACTATCACAGAATTGAAACACGCATAAACAAAGAATG
TGCTAGGAGACAGTAGGCAACAGTCTTAAAATTTCTGCTACTGTAGGGTT
TTTTTTCACACTgaaattttcaatatatctTTATTCTATATATACAATAA
ACATTTCCGAAAACTTGCAAAATATGACATAGTTTCTGGTGCTTAACACC
TTATTGATTGTTTGCTTGGTAACTTTACAACTAGAAAAAACGGAAAAGTC
TTTCAATATTTAGCTAAAATGAGACATTTTTTATTGCAAGAAGATTGAAA
GAGCATTCACACATTATTGAGATGCACCAATCAGAGATTGTTCTGTTCTA
AGCACTTTGAGCTGAAgccatttttgtaaatttagatTGAGTGGGAGGCA
TCTACTCAGAATAGCTGTGCATGAATGAATCTGGGGTCTAGGGTAAAGCC
CTGGTTGATGTTCAGAGGCTGCAGCTCccgaaaatctttttgaattttca
aatatgTAGATGTAGATAATAATAGTTATTTTTGCttgtaaacaacaaaa
aaagttaaattttgctacaaaatattttttctattttagattgagtttca
aaaatcaaatttggatCAAGTATTTTGGCCGGCAtacaaacataaaaaaa
ttctttttagaaATCTCTGCTAATATATTGAGCATGTATGAGAAGCTGAA
TAAATGCAAACAAGCTTTTTCTACTCTTTAAAATGATATCCTCattcatg
aatatttttttactaCATTCAGATGAAGTTTGGTAAAGTGGAAAAAATCA
CCCATAACAAAAGTATTTCTTCTTTAAaggattttcaattttgatttgaa
tgatctgtctacttagactacacaatatattgaaaaacaatATTTAGCAA
TATGGTTTGCAGCAGGTGACTGAGACTCAGCAATATATTCTCAATATATt
acctgacaatatattgtgtagtgtatgtagcccttaaggATGATATGAAA
AATCTGAATATTTAGGTATAGATTTGGAGTTCGTgagattcaaatatttt
tattttaattttcatcttcatttttcatattgttcaatatttcaaaactc
tttAACCGGTTAGGTTATTCTACTCAAAGATATCCTTCCAACAGTGTATA
GCTTTTTAATAAAGCATAAATGGTCGTTGAGAGTATTTTTACTGATTTAC
AGTCCTATataaaaacatgatttaaaaagTAAATGAGAAACATACattct
tttcttctttgtcACGTttttttgaagtattttttttctgtgTTGAAAGA
GGATGGCTCAAAATGGACATTGTCATAATGTTATCTCTAGACTAATCTAA
CTTTGACCTTGTATTTCTTTTAGATTTCGTAGAAAAATATACTGTCCAGA
CATCTCTTTAATTTATCTTGTTATTTTAACACTCTTTAAGAGGTGTTTTA
GTAGGAGTGCATTTCTATTATATGTAGGCTGATGTAGGTTGTATAATCTT
ACATGAAGATTCCTTTCATAGTTaaaatttctgaagaaaaatttctttga
aacatGAAAGCACATATAGGTTAAAAAAGTGTGGAAAAGAAATGCTATCG
ATACATGCTTTCATTATGTCATGGCTAGTGTTGTTATAATTACATGATTA
CTTTAATTACCTCGAGACCAAGCATGAAGAATTAattgtaaaaaataata
ttcATGCTTAAAAAGATTGAACTCTCTATCTTTCGGCACTGTTTAGTTTA
TGTCACATCCCTCACACACCCTCCTTACACTTTATGCCCTGCCTCTTCTT
CTCTTCTCTTAACTTGTAAGCCGGCAGAAAGTCTAAAGACAATATGTTTC
TctattttgacgtcaatgcaatgactttatTCAATATcttcaaacaaaga
ttttaacGGCCAATTTTCTGCCGAAATGAAACTTCTAAGAACTAATAcct
cattttcatctttttttccGGTTTCAGAATGACACGAGCATATTTGGTAA
TTTTGTTGGAAGGATCTCTTAACTTCAGCAATCGCTGTTCAAGGAATTGT
GACAAACCAAATAGACATTAAATTCAACATTCTTTATTTTATCCtcaaca
atttttatttatttttcaacgtAAATAATTTTAAACATTGGTTTGACCAA
TAttgtatatttatttcaatcctGCATTTTGGATTTATTGCTGCAcagta
ttttgaattttttattttcaaattttggattATTTTGCTCATCATTTTAC
ATTTGGTAAAAACCGTATATCAAGATTGATCAACTCTTgacttgtatatt
ttttacattgGATCGTATTTATTTACCGACTTAGTTATTTGTGATTTAAA
CCGCATAACATCATTCGAGTGTACAAAAAGTTTGTACAACTAGGAAAATT
CATTAACCAAAGAAGAGCTCTTCCATATGACCAAACAATACTATTGGAGT
CTACAAAGAGCTTCTAGCACAAGGAAAGTTAATCGACTCTCAAGAGAAAA
CCAAGAGATCCTTCCACATAACCAGTCAAACTCAGATAGGAAGAAAAAGA
GAGTGTTTCAAATAAAAGCACAGAACAAAAGAAGGTTTCAATCAAATCCA
CAAACTCATACCAAAACACTTTGTAAAACAACAATGGCTCCATGCTCAAA
TACAAAATGTCAACAACAACCAGAGCCTCCATTCATTTACCAAAAACCAC
CATCATCAAGCAACACTAAAGAATCCTTCGACAATCTCAACGATATTCAT
CAATCATCGCCAATCATCACCGAAGATGATACAgaatcaccagaaccacc
aTTACAACCAGTATCTCCAGAAGAGGATATCATATTCCAGCTTCACCCTC
AACGTTGGTTCGTCCTGGCATCATATTGCCTCCTATCCTTGGTCTGTGGC
TCAAATTGGCTTTGCTTTCCAGCAGTATCCAACATCTTAAGAGAATATTA
CCAAATCAGCATCTTGTCGATCAATATGCTTTCAATTGTATTTGGAATCT
GTTTAGTTCTTTTCTCCATACCATTTGCACTGTTGTTGAACAAATACGGT
CTTGCAGTGGTAATGCAGACGTCAGCATTTCTCAATTTAACAGGTTTGCT
ATTTTACTACGATTAATTGCAAACGATTGTACCAAGATGATTAGTTTAGA
ACGGTTCACATGTATCCGTTGTTCGTTTATGTGGTTCTTAAACTCTAGAA
TCTCAAGCGTGCCCTTTTGGCAACAATTGtctaaaaattatttaattgaA
CCTGTCCCCccaataaagaataaaagaacaTAGACAagtaaggcgagacc
aatttaatttgttgttctacgggcccgaccgaccctatttttgctaaaat
caaaaaataataatattgaattgccaccacaatatattttactcactact
tatttgtaagaatcaatttgaataaagctgaaaattaattcaaaaaattt
aaaaatttaaaaattcaagcattccatacactaagattttattatgatct
tcatcgaagataaaaaaaagtgaatttttgatctatatattttttggaaa
acattttcggtactttaccaaccctgataaatgaaaaatttattcttatt
ttaccgaccgaccgacctaTATTTTGCTAAcaatctgcccgtagaacaac
aaattaaattggtttcGCCTAATGAATTTTAGAAGGTCGAAGAAGAGAAT
TTCAAAACATGTCGTTTTTAAGTAAGAATATTTTGTGTACTTTGGATCAA
TGGGTATTCACAAACgactttctccttttttttccggacaccctgtattg
aTATGAAAATTCATAAGTTATTGATTTTCTTGTATTTCAGGAGCCCTTAT
CAAATATTTTGGAGATGATGCAGATCATGGCTACTGGTTCCTGCTCTGTG
GTAACACATTTCACGCCTTGTCTGTAGCAGGCTTCCTCTTCCTGCCAGGA
GACATCGCATCCACTTGGTTCGGGGAACACGAAGCAGGGAAGGCTACATC
CCTATGTGTAGCATTCGACGCTTTAGGGACCGGGGTAGGCTTCTTACTAG
CTACCACTATCGTTCAAGGAAATAAAGACCCCTACATTGTTCAAGGTAGC
ATCAAGCAGTTCCTATTATCTCAGCTGATTCCATCGGTAGCTGTCTTTCT
ATTTGTCTTGATGTTCGTGAGAAGAAGACCTCCCCATCCACCCAACTTCA
AAGAACTTGCTATCAGACGTGATGAGATGTTTAGAAAACACGTGCAACTA
CAATATTTGTTGGACATTGAACAGGTCTTGGATAGAAAGGGAAGTAAGTG
ATCCCTTCTTTTCATCGATATGTAGAATTGATATTTAACGTGGATTANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCAACGTTGGTTCG
TCCTGGCATCATATTGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTT
TGCTTTCCAGCAGTATCCAACATCTTAAGAGAATATTACCAAATCAGCAT
CTTGTCGATCAATATGCTTTCAATTGTATTTGGAATCTGTTTAGTTCTTT
TCTCCATACCATTTGCACTGTTGTTGAACAAATACGGTCTTGCAGTGGTA
ATGCAGACGTCAGCATTTCTCAATTTAACAGGTTTGCTATTTTACTACGA
TTAATTGCAAACGATTGTACCAAGATGATTAGTTTAGAACGGTTCACATG
TATCCGTTGTTCGATTATGTGGTTCTTGAACTCTAGAATCTCAAGCGTGC
CCTTTTGGCAACAATTatctaaaaattatttaattgaACCTGTCCCCcca
ataaagaataaaagaacaTAGACAagtaaggcgagaccaatttaatttgt
tgttctacgggcccgaccgaccctatttttgctaaaatcaaaaaataata
atattgaattgccaccacaatatattttactcactacttatttgtaagaa
tcaatttgaataaagctgaaaattaattcaaaaaattgaaaaatttaaaa
aatcaagcattccatacactaagattttattatgatcttcatcgaagata
aaaaaaagtgaatttttgatctatatattttttggaaaacattttcggta
ctttaccaaccctgataaatgaaaaatttattcttattttaccgaccgac
cgacctaTATTTTGCTAAcaatctgcccgtagaacaacaaattaaattgg
tttcGCCTAATGAATTTTAGAAGGTCGAAGAAGAGAATTTCAAAACATCT
CGTTTTTAAGTAAGAATATTTTGTGTACTTTGGATCAATGGGTATTCACA
AACgactttctccttttttttccggacaccctgtattgaTATGAAAATTC
ATAAGTTATTGATTTTCTTGTATTTCAGGAGCCCTTATCAAATATTTTGG
AGATGATGCAGATCATGGCTACTGGTTCCTGCTCTGTGGTAACACATTTC
ACGCCTTGTCTGTAGCAGGCTTCCTCTTCCTGCCAGGAGACATCGCATCC
ACTTGGTTCGGGGAACACGAAGCAGGGAAGGCTACATCCTTATGTGTAGC
ATTCGACGCTTTAGGGACCGGGGTAGGCTTCTTACTAGCTACCACTATCG
TTCAAGGAAATAAAGACCCCTACATTGTTCAAGGTAGCATCAAGCAGTTC
CTATTATCTCAGCTGATTCCATCGGTAGCTGTCTTTCTATTTGTCTTGAT
GTTCGTGAGAAGAAGACCTCCCCATCCACCCAACTTCAAAGAACTTGCTA
TCAGACGTGATGAGATGTTTAGAAAACACGTGCAACTACAATATTTGTTG
GACATTGAACAGGTCTTGGATAGAAAGGNaaaatgcactgtaagggtcgg
aaaaactagagatgcactgtaagggtagaaatttcagaaaattcttgaaa
aatctagatattttgaccaaaaatggtagaatttcgaccattttttgcac
gaaagggatcgaaaatttgggggaaaatgcactctaagggtatgattttc
actgatttttgctgcactgtaagggtgcaattttaaaagccaatttttgg
cccgcacataccgtcagtccgcaaacccagtgccccccccccccccgggt
tttcagtgcaaagaaatgctagaaaactaattaaatcaataatgtattac
gagtattcgctaaaatttatccacgcgaaatttctggttatattgccttg
atacatttttaccAATAGGAAGgttttcagtgcaaagaaatgctagaaaa
ctaattaaatcaataatgtattacgagtattcgctaaaatttatccacgc
gaaagtgtttgaaatcgtgattcgctaaaataaatccaaaaagaatcaag
attttcctgactcgctaatatacgctaaaattagtctcgctaaaatttct
acgattaaactAGACAGTCTTTTAATTGTTTCACGAAGGCAATGGTTATC
AGACTTGGTTTTTCATAAGCCGAGCTGAACACGGGGGAGGGGGAGGTGGT
TCGAACCGCGGACCCCTGGTTTAACCATTTTGCTAACGCTCCTTTagcct
actcttcgggatacgcgcactgctcttgttttgaatattgaatttttccg
GATACATCGCATGCACACTGAGAATTTGATTAGATTTCTATTATGTTCAA
TTCTATTAAAAAGCGAATTCCCgttgggggtcactagtggccgtaTACAT
CGCATGCACACTGAGAATTTGACTAGATTTCTATTATGTTCAATTCTATT
AAAAAGGGAATTCCCgttgggggtcactagtggccgtaTACATTTATTGT
GTTTTACATGACTTGAATTTTCAACTTACCTATTATATTTTCAGACGTGT
CTGAACCAGTGCACGTGCGACGTCTTCCGTGTATCAAACAACACCGTATT
CTGATGTCATCTTTattcaaactgatcaaaaataCAGATTTCCAACTCAT
CTTTCACATGCAAGGtgaatgaatttgaatttcaatttgtttAATCCAGA
CAAtactcgttttttataagaacatccaaaatttttgaagccttttgatg
tttcttagcatgttcttattttcgccatctTATGGgcattttggtccatt
tttctaaaaaatctggtgttttagagtcccaaATGGAATAATACAGCCTG
CCGTCCACTAGGCTATTTTTAGCTATCGCGAAATAATCATCTATAAATAA
CACTGTCTATCGTGTAATAACCCTGTCTATCGCGTTATTTTATTTCACGA
TAGGGagtgaaaaagttttcactcaAGATTTTATCCAATCGCGAAACCTT
TGTTTCGCGATAGTTTATAACAATAGAACCACCTgcatttcttttatttc
aatttttgcatAAGATCGAATTACATTTGATCGaagaaaaaatgagagaa
aatcATTTTGCTATAAAACCATCTTCATCACATGAGagcatttttgactt
ttgttgtGTGCTCTAGTGTAGTGTGATTGTATTGTATCCTATTTAATAGT
GGACatgtaaaatctaaaaataactTTTAGACATGAGATAACATTTCGCG
ATTACATTTCGCGATAACCAAAAATAGCACTAGTGGACGGCAGGCTTAAG
AGTAGTGATTATGGAATGGAGATGAAGATATGTATTACATATCGCAACag
tcttagaatgttcttaacttgttattAGCATTTTAGTCATCGAAgccctt
atgttcttatatagtttgttcttataaaaaacgtgtaatctgATATTGTC
ATCGTAAAGGCATAAAGGCGCaatctcaaaatgaaaaaataaatgtcTCA
TGAATGAGAATCTTCCATTTTATCTAAGCCTAAATGAGTCCTGGTTGGTA
TTAATTGGGGCACTTACCTATTATGCACAATATtacctaaaaaaaaatta
gttctctCAAACGCTAATTTAAAAAACGTTCTTCTCGATGGGAGCAATTT
CAAAATATAGTTCGTATCGTAAAATTTGAATAGCAGTCTTTCTTTCCAGG
ACACGGACCATTTGAAATAGATTAAAACTATTCATAATAATAGTTCCAAT
GTCGTATTTTGCTGTCAGCCATCTTTTATAAGGGAAAGGCCAAACCTTTT
TTGTATAATCCTGTAGCCAAATTCTAAAACACCTTATCAGAAAGTTCGCC
TCCTCGACATGTTGGCACGCAACAACACTTTTGCGGAGGTAAGCAAGTCC
CAAAATGGCGGATTTCAAGCATAAAGCCTTACAAAACAGCCCAtaatata
caccttttcgaccgtagccgccaattgccgtgcgGACATTTTTtctgtcc
gttttaccaccctaaactcgatccaatcctttttttacacttttttcttt
tgtctataggtgcgaaaaaaagactgggacggttttagggtggtaaagcG
GACAAAGAAATCTCTGCgtggcaattggtggctacggtcgaaaaggtgta
ttgatgcCTAAAGAACCTTAAAAACAACTGAAGCACCATcaaagttgttg
tttttctatCGTTCCTAATTAGAGTCTTTTTGTTCATTTCAGGAATCGTG
GCGTCCATTGAAGGTTTATACGAGATCCTCTTAAACGAGATGCTTATTGA
CATTTTCCCCGGTAGCGAACGAGCGATCGGGATTCTCggtttcgtttcag
tcattctCGGTTTTACGACGAACATTCTCGTCGGAGCTTTAATCGATAAA
ACGGGACATTACCGACGAGTGTCATTTATCGTTTTCTTTTTAACGACAAT
TTTCGCCTCGTTATGGTATATAGCGATCGAGTACATCCATAATTTCCTGG
CAATCTCAATCATATTAAGTCTGTTAATGTCCATCAGTACCTCATATTAC
ACAATTGCTTTTGCGCACGGAGCACAAGTAGCCGACAATGTCTCCGCATC
TGCAATTGGAGTCATGTTGGTGTTAACATCACAGATTTACGATACTATGA
GCTCATTTGTCGCAACTGAAATTTTATCGAGTTTTGGATCATCCTATGTA
AATGGTCTTGCTATAACTTTGTGTGTTGTTGCAACGATGTTGTCATTTTT
TGTAGGGAATGGTGATAATAAAAGGACTGAGGTCGCAGCACCGGCCCATG
TTTGATTATAATCGTTTATAGCTTTACGTTTCTAATATAG

Coding sequence (CDS) from alignment at scaffold_285:167196..180235+

>TCONS_00057055 ID=TCONS_00057055|Name=TCONS_00057055|organism=Clytia hemisphaerica|type=CDS|length=7212bp|location=Sequence derived from alignment at scaffold_285:167196..180235+ (Clytia hemisphaerica)
ATGACCAAACAATACTATTGGAGTCTACAAAGAGCTTCTAGCACAAGGAA
AGTTAATCGACTCTCAAGAGAAAACCAAGAGATCCTTCCACATAACCAGT
CAAACTCAGATAGGAAGAAAAAGAGAGTGTTTCAAATAAAAGCACAGAAC
AAAAGAAGGTTTCAATCAAATCCACAAACTCATACCAAAACACTTTGTAA
AACAACAATGGCTCCATGCTCAAATACAAAATGTCAACAACAACCAGAGC
CTCCATTCATTTACCAAAAACCACCATCATCAAGCAACACTAAAGAATCC
TTCGACAATCTCAACGATATTCATCAATCATCGCCAATCATCACCGAAGA
TGATACAgaatcaccagaaccaccaTTACAACCAGTATCTCCAGAAGAGG
ATATCATATTCCAGCTTCACCCTCAACGTTGGTTCGTCCTGGCATCATAT
TGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTTTGCTTTCCAGCAGT
ATCCAACATCTTAAGAGAATATTACCAAATCAGCATCTTGTCGATCAATA
TGCTTTCAATTGTATTTGGAATCTGTTTAGTTCTTTTCTCCATACCATTT
GCACTGTTGTTGAACAAATACGGTCTTGCAGTGGTAATGCAGACGTCAGC
ATTTCTCAATTTAACAGGAGCCCTTATCAAATATTTTGGAGATGATGCAG
ATCATGGCTACTGGTTCCTGCTCTGTGGTAACACATTTCACGCCTTGTCT
GTAGCAGGCTTCCTCTTCCTGCCAGGAGACATCGCATCCACTTGGTTCGG
GGAACACGAAGCAGGGAAGGCTACATCCCTATGTGTAGCATTCGACGCTT
TAGGGACCGGGGTAGGCTTCTTACTAGCTACCACTATCGTTCAAGGAAAT
AAAGACCCCTACATTGTTCAAGGTAGCATCAAGCAGTTCCTATTATCTCA
GCTGATTCCATCGGTAGCTGTCTTTCTATTTGTCTTGATGTTCGTGAGAA
GAAGACCTCCCCATCCACCCAACTTCAAAGAACTTGCTATCAGACGTGAT
GAGATGTTTAGAAAACACGTGCAACTACAATATTTGTTGGACATTGAACA
GGTCTTGGATAGAAAGGGAAACGTGTCTGAACCAGTGCACGTGCGACGTC
TTCCGTGTATCAAACAACACCGTATTCTGATGTCATCTTTattcaaactg
atcaaaaataCAGATTTCCAACTCATCTTTCACATGCAAGGAATCGTGGC
GTCCATTGAAGGTTTATACGAGATCCTCTTAAACGAGATGCTTATTGACA
TTTTCCCCGGTAGCGAACGAGCGATCGGGATTCTCggtttcgtttcagtc
attctCGGTTTTACGACGAACATTCTCGTCGGAGCTTTAATCGATAAAAC
GGGACATTACCGACGAGTGTCATTTATCGTTTTCTTTTTAACGACAATTT
TCGCCTCGTTATGGTATATAGCGATCGAGTACATCCATAATTTCCTGGCA
ATCTCAATCATATTAAGTCTGTTAATGTCCATCAGTACCTCATATTACAC
AATTGCTTTTGCGCACGGAGCACAAGTAGCCGACAATGTCTCCGCATCTG
CAATTGGAGTCATGTTGGTGTTAACATCACAGATTTACGATACTATGAGC
TCATTTGTCGCAACTGAAATTTTATCGAGTTTTGGATCATCCTATGTAAA
TGGTCTTGCTATAACTTTGTGTGTTGTTGCAACGATGTTGTCATTTTTTG
TAGGGAATGGTGATAATAAAAGGACTGAGGTCGCAGCACCGGCCCATGTT
TGAATGACCAAACAATACTATTGGAGTCTACAAAGAGCTTCTAGCACAAG
GAAAGTTAATCGACTCTCAAGAGAAAACCAAGAGATCCTTCCACATAACC
AGTCAAACTCAGATAGGAAGAAAAAGAGAGTGTTTCAAATAAAAGCACAG
AACAAAAGAAGGTTTCAATCAAATCCACAAACTCATACCAAAACACTTTG
TAAAACAACAATGGCTCCATGCTCAAATACAAAATGTCAACAACAACCAG
AGCCTCCATTCATTTACCAAAAACCACCATCATCAAGCAACACTAAAGAA
TCCTTCGACAATCTCAACGATATTCATCAATCATCGCCAATCATCACCGA
AGATGATACAgaatcaccagaaccaccaTTACAACCAGTATCTCCAGAAG
AGGATATCATATTCCAGCTTCACCCTCAACGTTGGTTCGTCCTGGCATCA
TATTGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTTTGCTTTCCAGC
AGTATCCAACATCTTAAGAGAATATTACCAAATCAGCATCTTGTCGATCA
ATATGCTTTCAATTGTATTTGGAATCTGTTTAGTTCTTTTCTCCATACCA
TTTGCACTGTTGTTGAACAAATACGGTCTTGCAGTGGTAATGCAGACGTC
AGCATTTCTCAATTTAACAGGAGCCCTTATCAAATATTTTGGAGATGATG
CAGATCATGGCTACTGGTTCCTGCTCTGTGGTAACACATTTCACGCCTTG
TCTGTAGCAGGCTTCCTCTTCCTGCCAGGAGACATCGCATCCACTTGGTT
CGGGGAACACGAAGCAGGGAAGGCTACATCCCTATGTGTAGCATTCGACG
CTTTAGGGACCGGGGTAGGCTTCTTACTAGCTACCACTATCGTTCAAGGA
AATAAAGACCCCTACATTGTTCAAGGTAGCATCAAGCAGTTCCTATTATC
TCAGCTGATTCCATCGGTAGCTGTCTTTCTATTTGTCTTGATGTTCGTGA
GAAGAAGACCTCCCCATCCACCCAACTTCAAAGAACTTGCTATCAGACGT
GATGAGATGTTTAGAAAACACGTGCAACTACAATATTTGTTGGACATTGA
ACAGGTCTTGGATAGAAAGGGAAACGTGTCTGAACCAGTGCACGTGCGAC
GTCTTCCGTGTATCAAACAACACCGTATTCTGATGTCATCTTTattcaaa
ctgatcaaaaataCAGATTTCCAACTCATCTTTCACATGCAAGGAATCGT
GGCGTCCATTGAAGGTTTATACGAGATCCTCTTAAACGAGATGCTTATTG
ACATTTTCCCCGGTAGCGAACGAGCGATCGGGATTCTCggtttcgtttca
gtcattctCGGTTTTACGACGAACATTCTCGTCGGAGCTTTAATCGATAA
AACGGGACATTACCGACGAGTGTCATTTATCGTTTTCTTTTTAACGACAA
TTTTCGCCTCGTTATGGTATATAGCGATCGAGTACATCCATAATTTCCTG
GCAATCTCAATCATATTAAGTCTGTTAATGTCCATCAGTACCTCATATTA
CACAATTGCTTTTGCGCACGGAGCACAAGTAGCCGACAATGTCTCCGCAT
CTGCAATTGGAGTCATGTTGGTGTTAACATCACAGATTTACGATACTATG
AGCTCATTTGTCGCAACTGAAATTTTATCGAGTTTTGGATCATCCTATGT
AAATGGTCTTGCTATAACTTTGTGTGTTGTTGCAACGATGTTGTCATTTT
TTGTAGGGAATGGTGATAATAAAAGGACTGAGGTCGCAGCACCGGCCCAT
GTTTGAATGACCAAACAATACTATTGGAGTCTACAAAGAGCTTCTAGCAC
AAGGAAAGTTAATCGACTCTCAAGAGAAAACCAAGAGATCCTTCCACATA
ACCAGTCAAACTCAGATAGGAAGAAAAAGAGAGTGTTTCAAATAAAAGCA
CAGAACAAAAGAAGGTTTCAATCAAATCCACAAACTCATACCAAAACACT
TTGTAAAACAACAATGGCTCCATGCTCAAATACAAAATGTCAACAACAAC
CAGAGCCTCCATTCATTTACCAAAAACCACCATCATCAAGCAACACTAAA
GAATCCTTCGACAATCTCAACGATATTCATCAATCATCGCCAATCATCAC
CGAAGATGATACAgaatcaccagaaccaccaTTACAACCAGTATCTCCAG
AAGAGGATATCATATTCCAGCTTCACCCTCAACGTTGGTTCGTCCTGGCA
TCATATTGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTTTGCTTTCC
AGCAGTATCCAACATCTTAAGAGAATATTACCAAATCAGCATCTTGTCGA
TCAATATGCTTTCAATTGTATTTGGAATCTGTTTAGTTCTTTTCTCCATA
CCATTTGCACTGTTGTTGAACAAATACGGTCTTGCAGTGGTAATGCAGAC
GTCAGCATTTCTCAATTTAACAGGAGCCCTTATCAAATATTTTGGAGATG
ATGCAGATCATGGCTACTGGTTCCTGCTCTGTGGTAACACATTTCACGCC
TTGTCTGTAGCAGGCTTCCTCTTCCTGCCAGGAGACATCGCATCCACTTG
GTTCGGGGAACACGAAGCAGGGAAGGCTACATCCCTATGTGTAGCATTCG
ACGCTTTAGGGACCGGGGTAGGCTTCTTACTAGCTACCACTATCGTTCAA
GGAAATAAAGACCCCTACATTGTTCAAGGTAGCATCAAGCAGTTCCTATT
ATCTCAGCTGATTCCATCGGTAGCTGTCTTTCTATTTGTCTTGATGTTCG
TGAGAAGAAGACCTCCCCATCCACCCAACTTCAAAGAACTTGCTATCAGA
CGTGATGAGATGTTTAGAAAACACGTGCAACTACAATATTTGTTGGACAT
TGAACAGGTCTTGGATAGAAAGGGAAACGTGTCTGAACCAGTGCACGTGC
GACGTCTTCCGTGTATCAAACAACACCGTATTCTGATGTCATCTTTattc
aaactgatcaaaaataCAGATTTCCAACTCATCTTTCACATGCAAGGAAT
CGTGGCGTCCATTGAAGGTTTATACGAGATCCTCTTAAACGAGATGCTTA
TTGACATTTTCCCCGGTAGCGAACGAGCGATCGGGATTCTCggtttcgtt
tcagtcattctCGGTTTTACGACGAACATTCTCGTCGGAGCTTTAATCGA
TAAAACGGGACATTACCGACGAGTGTCATTTATCGTTTTCTTTTTAACGA
CAATTTTCGCCTCGTTATGGTATATAGCGATCGAGTACATCCATAATTTC
CTGGCAATCTCAATCATATTAAGTCTGTTAATGTCCATCAGTACCTCATA
TTACACAATTGCTTTTGCGCACGGAGCACAAGTAGCCGACAATGTCTCCG
CATCTGCAATTGGAGTCATGTTGGTGTTAACATCACAGATTTACGATACT
ATGAGCTCATTTGTCGCAACTGAAATTTTATCGAGTTTTGGATCATCCTA
TGTAAATGGTCTTGCTATAACTTTGTGTGTTGTTGCAACGATGTTGTCAT
TTTTTGTAGGGAATGGTGATAATAAAAGGACTGAGGTCGCAGCACCGGCC
CATGTTTGAATGACCAAACAATACTATTGGAGTCTACAAAGAGCTTCTAG
CACAAGGAAAGTTAATCGACTCTCAAGAGAAAACCAAGAGATCCTTCCAC
ATAACCAGTCAAACTCAGATAGGAAGAAAAAGAGAGTGTTTCAAATAAAA
GCACAGAACAAAAGAAGGTTTCAATCAAATCCACAAACTCATACCAAAAC
ACTTTGTAAAACAACAATGGCTCCATGCTCAAATACAAAATGTCAACAAC
AACCAGAGCCTCCATTCATTTACCAAAAACCACCATCATCAAGCAACACT
AAAGAATCCTTCGACAATCTCAACGATATTCATCAATCATCGCCAATCAT
CACCGAAGATGATACAgaatcaccagaaccaccaTTACAACCAGTATCTC
CAGAAGAGGATATCATATTCCAGCTTCACCCTCAACGTTGGTTCGTCCTG
GCATCATATTGCCTCCTATCCTTGGTCTGTGGCTCAAATTGGCTTTGCTT
TCCAGCAGTATCCAACATCTTAAGAGAATATTACCAAATCAGCATCTTGT
CGATCAATATGCTTTCAATTGTATTTGGAATCTGTTTAGTTCTTTTCTCC
ATACCATTTGCACTGTTGTTGAACAAATACGGTCTTGCAGTGGTAATGCA
GACGTCAGCATTTCTCAATTTAACAGGAGCCCTTATCAAATATTTTGGAG
ATGATGCAGATCATGGCTACTGGTTCCTGCTCTGTGGTAACACATTTCAC
GCCTTGTCTGTAGCAGGCTTCCTCTTCCTGCCAGGAGACATCGCATCCAC
TTGGTTCGGGGAACACGAAGCAGGGAAGGCTACATCCCTATGTGTAGCAT
TCGACGCTTTAGGGACCGGGGTAGGCTTCTTACTAGCTACCACTATCGTT
CAAGGAAATAAAGACCCCTACATTGTTCAAGGTAGCATCAAGCAGTTCCT
ATTATCTCAGCTGATTCCATCGGTAGCTGTCTTTCTATTTGTCTTGATGT
TCGTGAGAAGAAGACCTCCCCATCCACCCAACTTCAAAGAACTTGCTATC
AGACGTGATGAGATGTTTAGAAAACACGTGCAACTACAATATTTGTTGGA
CATTGAACAGGTCTTGGATAGAAAGGGAAACGTGTCTGAACCAGTGCACG
TGCGACGTCTTCCGTGTATCAAACAACACCGTATTCTGATGTCATCTTTa
ttcaaactgatcaaaaataCAGATTTCCAACTCATCTTTCACATGCAAGG
AATCGTGGCGTCCATTGAAGGTTTATACGAGATCCTCTTAAACGAGATGC
TTATTGACATTTTCCCCGGTAGCGAACGAGCGATCGGGATTCTCggtttc
gtttcagtcattctCGGTTTTACGACGAACATTCTCGTCGGAGCTTTAAT
CGATAAAACGGGACATTACCGACGAGTGTCATTTATCGTTTTCTTTTTAA
CGACAATTTTCGCCTCGTTATGGTATATAGCGATCGAGTACATCCATAAT
TTCCTGGCAATCTCAATCATATTAAGTCTGTTAATGTCCATCAGTACCTC
ATATTACACAATTGCTTTTGCGCACGGAGCACAAGTAGCCGACAATGTCT
CCGCATCTGCAATTGGAGTCATGTTGGTGTTAACATCACAGATTTACGAT
ACTATGAGCTCATTTGTCGCAACTGAAATTTTATCGAGTTTTGGATCATC
CTATGTAAATGGTCTTGCTATAACTTTGTGTGTTGTTGCAACGATGTTGT
CATTTTTTGTAGGGAATGGTGATAATAAAAGGACTGAGGTCGCAGCACCG
GCCCATGTTTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_035947	XLOC_035947	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00057055-protein	TCONS_00057055-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_285	supercontig	scaffold_285:167196..180235 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.29679	5.85265	3.78975	3.19371	3.52017	3.08145	17.7619	17.0762	19.3602	14.3488	15.6794	18.9788	12.7134	11.5989	4.43228	6.08781	11.8037	13.9998	15.2313	15.9259	10.2673	9.1133	8.73354	12.2028	74.0301	47.5693	2.94047	2.52846	1.8587	1.74467

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

Blast

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BLAST of TCONS_00057055 vs. Swiss-Prot (Human)
Match: FLVC1 (Feline leukemia virus subgroup C receptor-related protein 1 OS=Homo sapiens GN=FLVCR1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.767e-28
Identity = 103/384 (26.82%), Postives = 167/384 (43.49%), Query Frame = 2

Query:  959 SPIITEDDTES--------PEPPLQPVSPEEDIIFQLHPQRWFVLASYCLLSLVCGSNWLCFPAVSNILREYYQISILSINMLSIVFGICLVLFSIPFALLLNKYGLAVVMQTSAFLNLTGALIKYFGDDADHGYWFLLCGNTFHALSVAGFLFLPGDIASTWFGEHEAGKATSLCVAFDALGTGVGFLLATTIVQGNK-DPYIVQGSIKQFLLSQLIPSVAVFLFVLMFV--RRRPPHPPNFKELAIRRDEMFRKHVQLQYLLDIEQVLDRKGNVSEPVHVRRLPCIKQHRILMSSLFKLIKNTDFQLIFHMQGIVASIEGLYEILLNEMLIDIFPGSERAIGILGFVSVILGFTTNILVGALIDKTGHYRRVSFIVFFLTTI 2077
            +P+  E++T++         E P    SP    +  L P+R+ VL  + L SLV    W+ +  +SN+   +Y +++L I+ LS+V+ +  V    P   LL+  GL +     + LN  GA IK  G    H +W  + G    +++    L LP  IAS WFG  E   A +  V  + LGT VGFLL   +V   + D  ++  +I          +VA  LF+L  +  + +P +PP+  + A++                           S P          +      S+  L KN  F L+    GI+         LLN+M++  + G E   G +G   V+ G   +IL G  +D T  Y++ + IV+ L+ I
Sbjct:   69 TPLAPEEETQARLLPAGAGAETPGAESSPLP--LTALSPRRFVVLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIK-CGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGT--SAVATLLFILTAIAFKEKPRYPPSQAQAALQD--------------------------SPP----------EEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFI 411

The following BLAST results are available for this feature:

BLAST of TCONS_00057055 vs. Swiss-Prot (Human)

BLAST of TCONS_00057055 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC1	5.767e-28	26.82	Feline leukemia virus subgroup C receptor-related ...	[more]

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TCONS_00057055 (transcript) - C. hemisphaerica